RNA–Protein interactions for RNA: ENST00000598619.1

HMGN2P46-208, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

BASIC

Gene HMGN2P46, Length 490 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-208ENST00000598619 PHAXQ9H814 394 aaKnown RBP11.42□□□□□ -0.58
HMGN2P46-208ENST00000598619 TRMT112Q9UI30 125 aaKnown RBP11.42□□□□□ -0.58
HMGN2P46-208ENST00000598619 COL11A2P13942 1736 aaPredicted RBP11.42□□□□□ -0.58
HMGN2P46-208ENST00000598619 ABCC12Q96J65 1359 aa11.41□□□□□ -0.58
HMGN2P46-208ENST00000598619 ATP5J2-PTCD1G3V325 749 aa11.41□□□□□ -0.58
HMGN2P46-208ENST00000598619 LMNB1P20700 586 aa11.41□□□□□ -0.58
HMGN2P46-208ENST00000598619 TWISTNBQ3B726 338 aaPredicted RBP11.41□□□□□ -0.58
HMGN2P46-208ENST00000598619 SOGA3Q5TF21 947 aa11.41□□□□□ -0.58
HMGN2P46-208ENST00000598619 NLRP10Q86W26 655 aa11.41□□□□□ -0.58
HMGN2P46-208ENST00000598619 STK31Q9BXU1 1019 aa11.41□□□□□ -0.58
HMGN2P46-208ENST00000598619 IBTKQ9P2D0 1353 aaPredicted RBP11.41□□□□□ -0.58
HMGN2P46-208ENST00000598619 CACNA1SQ13698 1873 aa11.4□□□□□ -0.58
HMGN2P46-208ENST00000598619 DDX58O95786 925 aaKnown RBP11.4□□□□□ -0.58
HMGN2P46-208ENST00000598619 RBM17Q96I25 401 aaKnown RBP11.4□□□□□ -0.58
HMGN2P46-208ENST00000598619 TAOK3Q9H2K8 898 aa11.4□□□□□ -0.58
HMGN2P46-208ENST00000598619 NFKBIEO00221 500 aa11.39□□□□□ -0.59
HMGN2P46-208ENST00000598619 HCLS1P14317 486 aaPredicted RBP11.39□□□□□ -0.59
HMGN2P46-208ENST00000598619 C1QTNF8P60827 252 aa11.39□□□□□ -0.59
HMGN2P46-208ENST00000598619 CCDC93Q567U6 631 aa11.39□□□□□ -0.59
HMGN2P46-208ENST00000598619 SLC10A5Q5PT55 438 aa11.39□□□□□ -0.59
HMGN2P46-208ENST00000598619 SLX4Q8IY92 1834 aa11.39□□□□□ -0.59
HMGN2P46-208ENST00000598619 RNF123Q5XPI4 1314 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 KDM2BQ8NHM5 1336 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 SH3TC1Q8TE82 1336 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 FANCIQ9NVI1 1328 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 SLC4A2P04920 1241 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 PRELPP51888 382 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 EXOSC9Q06265 439 aaKnown RBP11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 CRY2Q49AN0 593 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 RTL5Q5HYW3 569 aaPredicted RBP11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 OLFM4Q6UX06 510 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 C3orf67Q6ZVT6 689 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 SYNE4Q8N205 404 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 FAM89AQ96GI7 184 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 MYD88Q99836 296 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 ISCA1Q9BUE6 129 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 TMX4Q9H1E5 349 aaPredicted RBP11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 MYH16Q9H6N6 1097 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 TNRC6CQ9HCJ0 1690 aaKnown RBP11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 ANKRD36CQ5JPF3 1778 aa11.38□□□□□ -0.59
HMGN2P46-208ENST00000598619 HOXA10P31260 410 aaPredicted RBP11.37□□□□□ -0.59
HMGN2P46-208ENST00000598619 RTKN2Q8IZC4 609 aa11.37□□□□□ -0.59
HMGN2P46-208ENST00000598619 C7orf43Q8WVR3 580 aa11.37□□□□□ -0.59
HMGN2P46-208ENST00000598619 CRAMP1Q96RY5 1269 aa11.37□□□□□ -0.59
HMGN2P46-208ENST00000598619 RRAGCQ9HB90 399 aa11.37□□□□□ -0.59
HMGN2P46-208ENST00000598619 RIC1Q4ADV7 1423 aa11.36□□□□□ -0.59
HMGN2P46-208ENST00000598619 SBF1O95248 1867 aa11.36□□□□□ -0.59
HMGN2P46-208ENST00000598619 PPEF1O14829 653 aaPredicted RBP11.36□□□□□ -0.59
HMGN2P46-208ENST00000598619 FKBP4Q02790 459 aaKnown RBP eCLIP11.36□□□□□ -0.59
HMGN2P46-208ENST00000598619 DPY19L2Q6NUT2 758 aa11.36□□□□□ -0.59
HMGN2P46-208ENST00000598619 DDX46Q7L014 1031 aaKnown RBP11.36□□□□□ -0.59
HMGN2P46-208ENST00000598619 C16orf71Q8IYS4 520 aaPredicted RBP11.36□□□□□ -0.59
HMGN2P46-208ENST00000598619 NMRK2Q9NPI5 230 aa11.36□□□□□ -0.59
HMGN2P46-208ENST00000598619 SPINK5Q9NQ38 1064 aaPredicted RBP11.36□□□□□ -0.59
HMGN2P46-208ENST00000598619 MAP3K2Q9Y2U5 619 aa11.36□□□□□ -0.59
HMGN2P46-208ENST00000598619 ARFGEF2Q9Y6D5 1785 aa11.36□□□□□ -0.59
HMGN2P46-208ENST00000598619 LTBP3Q9NS15 1303 aa11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 PI4KAP2A4QPH2 592 aa11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 CCER2I3L3R5 266 aa11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 KIF3CO14782 793 aa11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 VAMP4O75379 141 aa11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 NEXNQ0ZGT2 675 aa11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 TRIM28Q13263 835 aaKnown RBP11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 CC2D2BQ6DHV5 1058 aa11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 KSR2Q6VAB6 950 aa11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 G2E3Q7L622 706 aa11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 PI4KAP1Q8N8J0 262 aa11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 METTL22Q9BUU2 404 aaPredicted RBP11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 ZNF277Q9NRM2 450 aaPredicted RBP11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 CCDC88AQ3V6T2 1871 aa11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 ABCC4O15439 1325 aa11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 ZC3H4Q9UPT8 1303 aaKnown RBP11.35□□□□□ -0.59
HMGN2P46-208ENST00000598619 FER1L6Q2WGJ9 1857 aa11.34□□□□□ -0.59
HMGN2P46-208ENST00000598619 GLTPD2A6NH11 291 aa11.34□□□□□ -0.59
HMGN2P46-208ENST00000598619 IRS4O14654 1257 aaPredicted RBP11.34□□□□□ -0.59
HMGN2P46-208ENST00000598619 DIEXFQ68CQ4 756 aaKnown RBP11.34□□□□□ -0.59
HMGN2P46-208ENST00000598619 ZBTB38Q8NAP3 1195 aaPredicted RBP11.34□□□□□ -0.59
HMGN2P46-208ENST00000598619 CCDC191Q8NCU4 936 aa11.34□□□□□ -0.59
HMGN2P46-208ENST00000598619 JARID2Q92833 1246 aaPredicted RBP11.34□□□□□ -0.59
HMGN2P46-208ENST00000598619 CWC25Q9NXE8 425 aaPredicted RBP11.34□□□□□ -0.59
HMGN2P46-208ENST00000598619 BBOX1O75936 387 aa11.33□□□□□ -0.6
HMGN2P46-208ENST00000598619 HSP90B1P14625 803 aaKnown RBP11.33□□□□□ -0.6
HMGN2P46-208ENST00000598619 FKBP5Q13451 457 aaPredicted RBP11.33□□□□□ -0.6
HMGN2P46-208ENST00000598619 GRIPAP1Q4V328 841 aa11.33□□□□□ -0.6
HMGN2P46-208ENST00000598619 TIAM2Q8IVF5 1701 aa11.32□□□□□ -0.6
HMGN2P46-208ENST00000598619 TOMM70O94826 608 aa11.32□□□□□ -0.6
HMGN2P46-208ENST00000598619 IARSP41252 1262 aaKnown RBP11.32□□□□□ -0.6
HMGN2P46-208ENST00000598619 FLIIQ13045 1269 aa11.32□□□□□ -0.6
HMGN2P46-208ENST00000598619 GRAPQ13588 217 aa11.32□□□□□ -0.6
HMGN2P46-208ENST00000598619 GRAPLQ8TC17 118 aaPredicted RBP11.32□□□□□ -0.6
HMGN2P46-208ENST00000598619 JDP2Q8WYK2 163 aa11.32□□□□□ -0.6
HMGN2P46-208ENST00000598619 PSMD1Q99460 953 aa11.32□□□□□ -0.6
HMGN2P46-208ENST00000598619 ATP6V0A2Q9Y487 856 aa11.32□□□□□ -0.6
HMGN2P46-208ENST00000598619 DDNO94850 711 aaPredicted RBP11.31□□□□□ -0.6
HMGN2P46-208ENST00000598619 PCCAP05165 728 aaPredicted RBP11.31□□□□□ -0.6
HMGN2P46-208ENST00000598619 VEGFAP15692 232 aaPredicted RBP11.31□□□□□ -0.6
HMGN2P46-208ENST00000598619 SF3B3Q15393 1217 aaKnown RBP11.31□□□□□ -0.6
HMGN2P46-208ENST00000598619 CWF19L2Q2TBE0 894 aaKnown RBP11.31□□□□□ -0.6
HMGN2P46-208ENST00000598619 SLC51AQ86UW1 340 aa11.31□□□□□ -0.6
HMGN2P46-208ENST00000598619 SP8Q8IXZ3 490 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms