RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 C3orf67Q6ZVT6 689 aa17.91■□□□□ 0.46
SCAF1-203ENST00000598359 KDM2BQ8NHM5 1336 aa17.91■□□□□ 0.46
SCAF1-203ENST00000598359 ELL2O00472 640 aaPredicted RBP17.9■□□□□ 0.46
SCAF1-203ENST00000598359 DIEXFQ68CQ4 756 aaKnown RBP17.9■□□□□ 0.46
SCAF1-203ENST00000598359 SLC51AQ86UW1 340 aa17.9■□□□□ 0.46
SCAF1-203ENST00000598359 TAOK3Q9H2K8 898 aa17.9■□□□□ 0.46
SCAF1-203ENST00000598359 MRS2Q9HD23 443 aa17.89■□□□□ 0.45
SCAF1-203ENST00000598359 IFT57Q9NWB7 429 aa17.89■□□□□ 0.45
SCAF1-203ENST00000598359 IBTKQ9P2D0 1353 aaPredicted RBP17.89■□□□□ 0.45
SCAF1-203ENST00000598359 ANP32CO43423 234 aa17.88■□□□□ 0.45
SCAF1-203ENST00000598359 CRY2Q49AN0 593 aa17.88■□□□□ 0.45
SCAF1-203ENST00000598359 CCDC93Q567U6 631 aa17.88■□□□□ 0.45
SCAF1-203ENST00000598359 PPP1R42Q7Z4L9 355 aa17.88■□□□□ 0.45
SCAF1-203ENST00000598359 SYNE4Q8N205 404 aa17.88■□□□□ 0.45
SCAF1-203ENST00000598359 GLTPD2A6NH11 291 aa17.87■□□□□ 0.45
SCAF1-203ENST00000598359 HOXB7P09629 217 aa17.87■□□□□ 0.45
SCAF1-203ENST00000598359 GNAI1P63096 354 aa17.87■□□□□ 0.45
SCAF1-203ENST00000598359 PARP10Q53GL7 1025 aa17.87■□□□□ 0.45
SCAF1-203ENST00000598359 SOGA3Q5TF21 947 aa17.87■□□□□ 0.45
SCAF1-203ENST00000598359 UTP14AQ9BVJ6 771 aaKnown RBP17.87■□□□□ 0.45
SCAF1-203ENST00000598359 LTBP3Q9NS15 1303 aa17.87■□□□□ 0.45
SCAF1-203ENST00000598359 ZC3H4Q9UPT8 1303 aaKnown RBP17.87■□□□□ 0.45
SCAF1-203ENST00000598359 TCERG1O14776 1098 aaKnown RBP17.86■□□□□ 0.45
SCAF1-203ENST00000598359 ALDH1B1P30837 517 aa17.86■□□□□ 0.45
SCAF1-203ENST00000598359 NLRP10Q86W26 655 aa17.86■□□□□ 0.45
SCAF1-203ENST00000598359 C8orf58Q8NAV2 365 aa17.86■□□□□ 0.45
SCAF1-203ENST00000598359 RPGRQ92834 1020 aaKnown RBP17.86■□□□□ 0.45
SCAF1-203ENST00000598359 ZNF277Q9NRM2 450 aaPredicted RBP17.86■□□□□ 0.45
SCAF1-203ENST00000598359 HCLS1P14317 486 aaPredicted RBP17.85■□□□□ 0.45
SCAF1-203ENST00000598359 CALD1Q05682 793 aaKnown RBP17.85■□□□□ 0.45
SCAF1-203ENST00000598359 TCIRG1Q13488 830 aa17.85■□□□□ 0.45
SCAF1-203ENST00000598359 RIC1Q4ADV7 1423 aa17.85■□□□□ 0.45
SCAF1-203ENST00000598359 ANKRD36CQ5JPF3 1778 aa17.85■□□□□ 0.45
SCAF1-203ENST00000598359 TSR2Q969E8 191 aaKnown RBP17.85■□□□□ 0.45
SCAF1-203ENST00000598359 DBF4Q9UBU7 674 aaPredicted RBP17.85■□□□□ 0.45
SCAF1-203ENST00000598359 HSPA1AP0DMV8 641 aaKnown RBP17.84■□□□□ 0.45
SCAF1-203ENST00000598359 HSPA1BP0DMV9 641 aaKnown RBP17.84■□□□□ 0.45
SCAF1-203ENST00000598359 FKBP4Q02790 459 aaKnown RBP eCLIP17.84■□□□□ 0.45
SCAF1-203ENST00000598359 ATP5J2-PTCD1G3V325 749 aa17.83■□□□□ 0.44
SCAF1-203ENST00000598359 HOXA10P31260 410 aaPredicted RBP17.83■□□□□ 0.44
SCAF1-203ENST00000598359 HSP90AB3PQ58FF7 597 aa17.83■□□□□ 0.44
SCAF1-203ENST00000598359 ANKRD13DQ6ZTN6 518 aa17.83■□□□□ 0.44
SCAF1-203ENST00000598359 SMC1BQ8NDV3 1235 aa17.83■□□□□ 0.44
SCAF1-203ENST00000598359 PLBD2Q8NHP8 589 aa17.83■□□□□ 0.44
SCAF1-203ENST00000598359 RBM17Q96I25 401 aaKnown RBP17.83■□□□□ 0.44
SCAF1-203ENST00000598359 PHAXQ9H814 394 aaKnown RBP17.83■□□□□ 0.44
SCAF1-203ENST00000598359 TRMT112Q9UI30 125 aaKnown RBP17.83■□□□□ 0.44
SCAF1-203ENST00000598359 SALL2Q9Y467 1007 aaPredicted RBP17.83■□□□□ 0.44
SCAF1-203ENST00000598359 DICER1Q9UPY3 1922 aaKnown RBP17.82■□□□□ 0.44
SCAF1-203ENST00000598359 POTECB2RU33 542 aa17.82■□□□□ 0.44
SCAF1-203ENST00000598359 SLC10A5Q5PT55 438 aa17.82■□□□□ 0.44
SCAF1-203ENST00000598359 WWC1Q8IX03 1113 aa17.82■□□□□ 0.44
SCAF1-203ENST00000598359 RTKN2Q8IZC4 609 aa17.82■□□□□ 0.44
SCAF1-203ENST00000598359 TSPYL6Q8N831 410 aa17.82■□□□□ 0.44
SCAF1-203ENST00000598359 NLRP3Q96P20 1036 aa17.82■□□□□ 0.44
SCAF1-203ENST00000598359 HYPKQ9NX55 129 aa17.82■□□□□ 0.44
SCAF1-203ENST00000598359 SNED1Q8TER0 1413 aa17.81■□□□□ 0.44
SCAF1-203ENST00000598359 DDNO94850 711 aaPredicted RBP17.81■□□□□ 0.44
SCAF1-203ENST00000598359 VEGFAP15692 232 aaPredicted RBP17.81■□□□□ 0.44
SCAF1-203ENST00000598359 DPY19L2Q6NUT2 758 aa17.81■□□□□ 0.44
SCAF1-203ENST00000598359 CRAMP1Q96RY5 1269 aa17.81■□□□□ 0.44
SCAF1-203ENST00000598359 PPEF1O14829 653 aaPredicted RBP17.8■□□□□ 0.44
SCAF1-203ENST00000598359 RTL5Q5HYW3 569 aaPredicted RBP17.8■□□□□ 0.44
SCAF1-203ENST00000598359 ABCC4O15439 1325 aa17.79■□□□□ 0.44
SCAF1-203ENST00000598359 SH3TC1Q8TE82 1336 aa17.79■□□□□ 0.44
SCAF1-203ENST00000598359 ZNF541Q9H0D2 1346 aa17.79■□□□□ 0.44
SCAF1-203ENST00000598359 FAM89AQ96GI7 184 aa17.79■□□□□ 0.44
SCAF1-203ENST00000598359 ISCA1Q9BUE6 129 aa17.79■□□□□ 0.44
SCAF1-203ENST00000598359 LAMB2P55268 1798 aa17.79■□□□□ 0.44
SCAF1-203ENST00000598359 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
SCAF1-203ENST00000598359 SLC34A2O95436 690 aa17.78■□□□□ 0.44
SCAF1-203ENST00000598359 IARSP41252 1262 aaKnown RBP17.78■□□□□ 0.44
SCAF1-203ENST00000598359 CCDC27Q2M243 656 aa17.78■□□□□ 0.44
SCAF1-203ENST00000598359 RIC3Q7Z5B4 369 aa17.78■□□□□ 0.44
SCAF1-203ENST00000598359 COL4A5P29400 1685 aa17.77■□□□□ 0.44
SCAF1-203ENST00000598359 GOLGA2Q08379 1002 aa17.77■□□□□ 0.44
SCAF1-203ENST00000598359 FAM9BQ8IZU0 186 aa17.77■□□□□ 0.44
SCAF1-203ENST00000598359 PSMD1Q99460 953 aa17.76■□□□□ 0.43
SCAF1-203ENST00000598359 MYD88Q99836 296 aa17.76■□□□□ 0.43
SCAF1-203ENST00000598359 DDX60Q8IY21 1712 aaKnown RBP17.75■□□□□ 0.43
SCAF1-203ENST00000598359 POTEIP0CG38 1075 aa17.75■□□□□ 0.43
SCAF1-203ENST00000598359 POTEJP0CG39 1038 aa17.75■□□□□ 0.43
SCAF1-203ENST00000598359 CCDC30Q5VVM6 783 aa17.75■□□□□ 0.43
SCAF1-203ENST00000598359 CC2D2BQ6DHV5 1058 aa17.75■□□□□ 0.43
SCAF1-203ENST00000598359 JARID2Q92833 1246 aaPredicted RBP17.75■□□□□ 0.43
SCAF1-203ENST00000598359 TAF1P21675 1872 aa17.74■□□□□ 0.43
SCAF1-203ENST00000598359 DDX46Q7L014 1031 aaKnown RBP17.74■□□□□ 0.43
SCAF1-203ENST00000598359 ATP6V0A2Q9Y487 856 aa17.74■□□□□ 0.43
SCAF1-203ENST00000598359 FZD9O00144 591 aa17.73■□□□□ 0.43
SCAF1-203ENST00000598359 TWISTNBQ3B726 338 aaPredicted RBP17.73■□□□□ 0.43
SCAF1-203ENST00000598359 COL4A1P02462 1669 aa17.73■□□□□ 0.43
SCAF1-203ENST00000598359 IL16Q14005 1332 aa17.72■□□□□ 0.43
SCAF1-203ENST00000598359 FANCIQ9NVI1 1328 aa17.72■□□□□ 0.43
SCAF1-203ENST00000598359 TRIM28Q13263 835 aaKnown RBP17.72■□□□□ 0.43
SCAF1-203ENST00000598359 GRAPQ13588 217 aa17.72■□□□□ 0.43
SCAF1-203ENST00000598359 G2E3Q7L622 706 aa17.72■□□□□ 0.43
SCAF1-203ENST00000598359 LARGE2Q8N3Y3 721 aa17.72■□□□□ 0.43
SCAF1-203ENST00000598359 GRAPLQ8TC17 118 aaPredicted RBP17.72■□□□□ 0.43
SCAF1-203ENST00000598359 JDP2Q8WYK2 163 aa17.72■□□□□ 0.43
SCAF1-203ENST00000598359 IRS4O14654 1257 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms