RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 TRIM27P14373 513 aa28.02■■■□□ 2.08
CHMP2A-204ENST00000597848 ST5P78524 1137 aa28.02■■■□□ 2.08
CHMP2A-204ENST00000597848 NUTM1Q86Y26 1132 aa28.02■■■□□ 2.08
CHMP2A-204ENST00000597848 CLUAP1Q96AJ1 413 aa28.02■■■□□ 2.08
CHMP2A-204ENST00000597848 SRCIN1Q9C0H9 1055 aa28.02■■■□□ 2.08
CHMP2A-204ENST00000597848 NTSR2O95665 410 aa28.01■■■□□ 2.07
CHMP2A-204ENST00000597848 TNNQ9UQP3 1299 aa28■■■□□ 2.07
CHMP2A-204ENST00000597848 ALDH1L1O75891 902 aa27.99■■■□□ 2.07
CHMP2A-204ENST00000597848 GCKRQ14397 625 aa27.99■■■□□ 2.07
CHMP2A-204ENST00000597848 ERFEQ4G0M1 354 aa27.99■■■□□ 2.07
CHMP2A-204ENST00000597848 RTL5Q5HYW3 569 aaPredicted RBP27.99■■■□□ 2.07
CHMP2A-204ENST00000597848 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.99■■■□□ 2.07
CHMP2A-204ENST00000597848 ANKRD36CQ5JPF3 1778 aa27.99■■■□□ 2.07
CHMP2A-204ENST00000597848 IBTKQ9P2D0 1353 aaPredicted RBP27.99■■■□□ 2.07
CHMP2A-204ENST00000597848 SH3TC1Q8TE82 1336 aa27.98■■■□□ 2.07
CHMP2A-204ENST00000597848 PLIN1O60240 522 aa27.98■■■□□ 2.07
CHMP2A-204ENST00000597848 CCT4P50991 539 aaKnown RBP27.98■■■□□ 2.07
CHMP2A-204ENST00000597848 JARID2Q92833 1246 aaPredicted RBP27.98■■■□□ 2.07
CHMP2A-204ENST00000597848 FAM89AQ96GI7 184 aa27.98■■■□□ 2.07
CHMP2A-204ENST00000597848 FTSJ3Q8IY81 847 aaKnown RBP27.97■■■□□ 2.07
CHMP2A-204ENST00000597848 ZBTB38Q8NAP3 1195 aaPredicted RBP27.97■■■□□ 2.07
CHMP2A-204ENST00000597848 RNF123Q5XPI4 1314 aa27.96■■■□□ 2.07
CHMP2A-204ENST00000597848 DZIP1LQ8IYY4 767 aaKnown RBP27.96■■■□□ 2.07
CHMP2A-204ENST00000597848 SYNE4Q8N205 404 aa27.96■■■□□ 2.07
CHMP2A-204ENST00000597848 FHDC1Q9C0D6 1143 aaPredicted RBP27.96■■■□□ 2.07
CHMP2A-204ENST00000597848 ABCC4O15439 1325 aa27.95■■■□□ 2.07
CHMP2A-204ENST00000597848 PCCAP05165 728 aaPredicted RBP27.95■■■□□ 2.06
CHMP2A-204ENST00000597848 BRIP1Q9BX63 1249 aa27.95■■■□□ 2.06
CHMP2A-204ENST00000597848 C9orf78Q9NZ63 289 aaPredicted RBP27.95■■■□□ 2.06
CHMP2A-204ENST00000597848 CD2APQ9Y5K6 639 aa27.95■■■□□ 2.06
CHMP2A-204ENST00000597848 MS4A1P11836 297 aa27.94■■■□□ 2.06
CHMP2A-204ENST00000597848 AFDNP55196 1824 aaKnown RBP27.94■■■□□ 2.06
CHMP2A-204ENST00000597848 PXDNLA1KZ92 1463 aa27.94■■■□□ 2.06
CHMP2A-204ENST00000597848 HCLS1P14317 486 aaPredicted RBP27.93■■■□□ 2.06
CHMP2A-204ENST00000597848 UBE3BQ7Z3V4 1068 aa27.93■■■□□ 2.06
CHMP2A-204ENST00000597848 C10orf71Q711Q0 1435 aa27.92■■■□□ 2.06
CHMP2A-204ENST00000597848 LRP5O75197 1615 aa27.92■■■□□ 2.06
CHMP2A-204ENST00000597848 H7C1W4 665 aa27.92■■■□□ 2.06
CHMP2A-204ENST00000597848 IRS4O14654 1257 aaPredicted RBP27.92■■■□□ 2.06
CHMP2A-204ENST00000597848 PDE6BP35913 854 aa27.92■■■□□ 2.06
CHMP2A-204ENST00000597848 SLC10A5Q5PT55 438 aa27.92■■■□□ 2.06
CHMP2A-204ENST00000597848 INTS3Q68E01 1043 aaKnown RBP27.92■■■□□ 2.06
CHMP2A-204ENST00000597848 NRXN2Q9P2S2 1712 aa27.92■■■□□ 2.06
CHMP2A-204ENST00000597848 ABCC12Q96J65 1359 aa27.91■■■□□ 2.06
CHMP2A-204ENST00000597848 TMEM57Q8N5G2 664 aa27.91■■■□□ 2.06
CHMP2A-204ENST00000597848 PANK1Q8TE04 598 aa27.91■■■□□ 2.06
CHMP2A-204ENST00000597848 GRM8O00222 908 aa27.9■■■□□ 2.06
CHMP2A-204ENST00000597848 HSP90B1P14625 803 aaKnown RBP27.9■■■□□ 2.06
CHMP2A-204ENST00000597848 NLRP3Q96P20 1036 aa27.9■■■□□ 2.06
CHMP2A-204ENST00000597848 RLBP1P12271 317 aa27.89■■■□□ 2.06
CHMP2A-204ENST00000597848 SYT17Q9BSW7 474 aa27.89■■■□□ 2.06
CHMP2A-204ENST00000597848 RRP1P56182 461 aaKnown RBP27.88■■■□□ 2.05
CHMP2A-204ENST00000597848 TGFB2P61812 414 aa27.88■■■□□ 2.05
CHMP2A-204ENST00000597848 C2CD5Q86YS7 1000 aa27.88■■■□□ 2.05
CHMP2A-204ENST00000597848 CDHR2Q9BYE9 1310 aa27.88■■■□□ 2.05
CHMP2A-204ENST00000597848 A0A0G2JLW4 131 aa27.87■■■□□ 2.05
CHMP2A-204ENST00000597848 H0YIN7 160 aa27.87■■■□□ 2.05
CHMP2A-204ENST00000597848 CHRNA5P30532 468 aa27.87■■■□□ 2.05
CHMP2A-204ENST00000597848 ITPRIPQ8IWB1 547 aa27.87■■■□□ 2.05
CHMP2A-204ENST00000597848 NLGN2Q8NFZ4 835 aa27.87■■■□□ 2.05
CHMP2A-204ENST00000597848 USP44Q9H0E7 712 aa27.87■■■□□ 2.05
CHMP2A-204ENST00000597848 DPEP1P16444 411 aa27.86■■■□□ 2.05
CHMP2A-204ENST00000597848 PDZRN3Q9UPQ7 1066 aa27.86■■■□□ 2.05
CHMP2A-204ENST00000597848 PDE8AO60658 829 aa27.85■■■□□ 2.05
CHMP2A-204ENST00000597848 NBPF7P0C2Y1 421 aaPredicted RBP27.85■■■□□ 2.05
CHMP2A-204ENST00000597848 CASP7P55210 303 aa27.85■■■□□ 2.05
CHMP2A-204ENST00000597848 C3orf67Q6ZVT6 689 aa27.85■■■□□ 2.05
CHMP2A-204ENST00000597848 SUPT16HQ9Y5B9 1047 aaKnown RBP27.85■■■□□ 2.05
CHMP2A-204ENST00000597848 PDE3AQ14432 1141 aa27.84■■■□□ 2.05
CHMP2A-204ENST00000597848 KLRG2A4D1S0 409 aaPredicted RBP27.83■■■□□ 2.05
CHMP2A-204ENST00000597848 C20orf194Q5TEA3 1177 aa27.83■■■□□ 2.05
CHMP2A-204ENST00000597848 ZNF622Q969S3 477 aaKnown RBP eCLIP27.83■■■□□ 2.051e-7■□□□□ 10.6
CHMP2A-204ENST00000597848 RIC1Q4ADV7 1423 aa27.83■■■□□ 2.05
CHMP2A-204ENST00000597848 CENPBP07199 599 aaPredicted RBP27.82■■■□□ 2.04
CHMP2A-204ENST00000597848 UBTFL1P0CB47 393 aaPredicted RBP27.82■■■□□ 2.04
CHMP2A-204ENST00000597848 RPGRQ92834 1020 aaKnown RBP27.82■■■□□ 2.04
CHMP2A-204ENST00000597848 COG6Q9Y2V7 657 aa27.82■■■□□ 2.04
CHMP2A-204ENST00000597848 UTYO14607 1347 aa27.82■■■□□ 2.04
CHMP2A-204ENST00000597848 SRGNP10124 158 aa27.81■■■□□ 2.04
CHMP2A-204ENST00000597848 MEIS3Q99687 375 aa27.81■■■□□ 2.04
CHMP2A-204ENST00000597848 GNAI3P08754 354 aa27.8■■■□□ 2.04
CHMP2A-204ENST00000597848 NPR1P16066 1061 aa27.8■■■□□ 2.04
CHMP2A-204ENST00000597848 MASTLQ96GX5 879 aa27.8■■■□□ 2.04
CHMP2A-204ENST00000597848 SUCLG2Q96I99 432 aa27.8■■■□□ 2.04
CHMP2A-204ENST00000597848 PLA2G12BQ9BX93 195 aa27.8■■■□□ 2.04
CHMP2A-204ENST00000597848 ANKRD31Q8N7Z5 1873 aa27.79■■■□□ 2.04
CHMP2A-204ENST00000597848 CTSWP56202 376 aa27.79■■■□□ 2.04
CHMP2A-204ENST00000597848 MVPQ14764 893 aaKnown RBP27.79■■■□□ 2.04
CHMP2A-204ENST00000597848 SF3B3Q15393 1217 aaKnown RBP27.79■■■□□ 2.04
CHMP2A-204ENST00000597848 CRY2Q49AN0 593 aa27.79■■■□□ 2.04
CHMP2A-204ENST00000597848 RBM17Q96I25 401 aaKnown RBP27.79■■■□□ 2.04
CHMP2A-204ENST00000597848 CCDC85AQ96PX6 553 aaPredicted RBP27.79■■■□□ 2.04
CHMP2A-204ENST00000597848 WWC3Q9ULE0 1092 aa27.79■■■□□ 2.04
CHMP2A-204ENST00000597848 HDAC5Q9UQL6 1122 aa27.79■■■□□ 2.04
CHMP2A-204ENST00000597848 KIF13BQ9NQT8 1826 aa27.78■■■□□ 2.04
CHMP2A-204ENST00000597848 CCDC152Q4G0S7 254 aa27.78■■■□□ 2.04
CHMP2A-204ENST00000597848 STYK1Q6J9G0 422 aa27.78■■■□□ 2.04
CHMP2A-204ENST00000597848 PIM2Q9P1W9 311 aa27.78■■■□□ 2.04
CHMP2A-204ENST00000597848 KCNA3P22001 575 aa27.77■■■□□ 2.04
CHMP2A-204ENST00000597848 DDX46Q7L014 1031 aaKnown RBP27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms