RNA–Protein interactions for RNA: ENST00000597756.1

NOTCH3-204, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-204ENST00000597756 TTLL6Q8N841 843 aa16.13■□□□□ 0.17
NOTCH3-204ENST00000597756 RNF123Q5XPI4 1314 aa16.13■□□□□ 0.17
NOTCH3-204ENST00000597756 ABCC12Q96J65 1359 aa16.13■□□□□ 0.17
NOTCH3-204ENST00000597756 SLX4Q8IY92 1834 aa16.12■□□□□ 0.17
NOTCH3-204ENST00000597756 CRY2Q49AN0 593 aa16.12■□□□□ 0.17
NOTCH3-204ENST00000597756 STYK1Q6J9G0 422 aa16.12■□□□□ 0.17
NOTCH3-204ENST00000597756 KSR2Q6VAB6 950 aa16.12■□□□□ 0.17
NOTCH3-204ENST00000597756 RIC3Q7Z5B4 369 aa16.12■□□□□ 0.17
NOTCH3-204ENST00000597756 METTL22Q9BUU2 404 aaPredicted RBP16.12■□□□□ 0.17
NOTCH3-204ENST00000597756 UTP14AQ9BVJ6 771 aaKnown RBP16.12■□□□□ 0.17
NOTCH3-204ENST00000597756 TNRC6CQ9HCJ0 1690 aaKnown RBP16.11■□□□□ 0.17
NOTCH3-204ENST00000597756 PI4KAP2A4QPH2 592 aa16.11■□□□□ 0.17
NOTCH3-204ENST00000597756 DDX58O95786 925 aaKnown RBP16.11■□□□□ 0.17
NOTCH3-204ENST00000597756 PI4KAP1Q8N8J0 262 aa16.11■□□□□ 0.17
NOTCH3-204ENST00000597756 MASTLQ96GX5 879 aa16.11■□□□□ 0.17
NOTCH3-204ENST00000597756 ADCY9O60503 1353 aa16.11■□□□□ 0.17
NOTCH3-204ENST00000597756 SBF1O95248 1867 aa16.1■□□□□ 0.17
NOTCH3-204ENST00000597756 ATP5J2-PTCD1G3V325 749 aa16.1■□□□□ 0.17
NOTCH3-204ENST00000597756 NPHP1O15259 732 aa16.1■□□□□ 0.17
NOTCH3-204ENST00000597756 NPR1P16066 1061 aa16.1■□□□□ 0.17
NOTCH3-204ENST00000597756 GTF2E1P29083 439 aaPredicted RBP16.1■□□□□ 0.17
NOTCH3-204ENST00000597756 HOXA10P31260 410 aaPredicted RBP16.1■□□□□ 0.17
NOTCH3-204ENST00000597756 FLIIQ13045 1269 aa16.1■□□□□ 0.17
NOTCH3-204ENST00000597756 SYNE4Q8N205 404 aa16.1■□□□□ 0.17
NOTCH3-204ENST00000597756 LAMB2P55268 1798 aa16.09■□□□□ 0.17
NOTCH3-204ENST00000597756 C7orf43Q8WVR3 580 aa16.09■□□□□ 0.17
NOTCH3-204ENST00000597756 CNKSR1Q969H4 720 aa16.09■□□□□ 0.17
NOTCH3-204ENST00000597756 ZNF622Q969S3 477 aaKnown RBP eCLIP16.09■□□□□ 0.17
NOTCH3-204ENST00000597756 TRMT112Q9UI30 125 aaKnown RBP16.09■□□□□ 0.17
NOTCH3-204ENST00000597756 MAP3K2Q9Y2U5 619 aa16.09■□□□□ 0.17
NOTCH3-204ENST00000597756 CACNA1SQ13698 1873 aa16.09■□□□□ 0.17
NOTCH3-204ENST00000597756 IGKV5-2P06315 115 aa16.08■□□□□ 0.16
NOTCH3-204ENST00000597756 C3orf67Q6ZVT6 689 aa16.08■□□□□ 0.16
NOTCH3-204ENST00000597756 CCDC191Q8NCU4 936 aa16.08■□□□□ 0.16
NOTCH3-204ENST00000597756 ZNF428Q96B54 188 aa16.08■□□□□ 0.16
NOTCH3-204ENST00000597756 MYD88Q99836 296 aa16.08■□□□□ 0.16
NOTCH3-204ENST00000597756 SH3TC1Q8TE82 1336 aa16.08■□□□□ 0.16
NOTCH3-204ENST00000597756 DDX60Q8IY21 1712 aaKnown RBP16.08■□□□□ 0.16
NOTCH3-204ENST00000597756 FER1L6Q2WGJ9 1857 aa16.08■□□□□ 0.16
NOTCH3-204ENST00000597756 YY1P25490 414 aa16.07■□□□□ 0.16
NOTCH3-204ENST00000597756 NLRP3Q96P20 1036 aa16.07■□□□□ 0.16
NOTCH3-204ENST00000597756 CT47B1P0C2W7 299 aaPredicted RBP16.06■□□□□ 0.16
NOTCH3-204ENST00000597756 ALDH1B1P30837 517 aa16.06■□□□□ 0.16
NOTCH3-204ENST00000597756 ARHGAP27Q6ZUM4 889 aa16.06■□□□□ 0.16
NOTCH3-204ENST00000597756 MRPL50Q8N5N7 158 aaKnown RBP16.06■□□□□ 0.16
NOTCH3-204ENST00000597756 FAM89AQ96GI7 184 aa16.06■□□□□ 0.16
NOTCH3-204ENST00000597756 CCDC88AQ3V6T2 1871 aa16.05■□□□□ 0.16
NOTCH3-204ENST00000597756 HCLS1P14317 486 aaPredicted RBP16.05■□□□□ 0.16
NOTCH3-204ENST00000597756 HNRNPUQ00839 825 aaKnown RBP eCLIP16.05■□□□□ 0.16
NOTCH3-204ENST00000597756 PRPF40BQ6NWY9 871 aaKnown RBP16.05■□□□□ 0.16
NOTCH3-204ENST00000597756 ZBTB38Q8NAP3 1195 aaPredicted RBP16.05■□□□□ 0.16
NOTCH3-204ENST00000597756 DNAAF4Q8WXU2 420 aa16.05■□□□□ 0.16
NOTCH3-204ENST00000597756 SSH1Q8WYL5 1049 aa16.05■□□□□ 0.16
NOTCH3-204ENST00000597756 CRAMP1Q96RY5 1269 aa16.05■□□□□ 0.16
NOTCH3-204ENST00000597756 PCCAP05165 728 aaPredicted RBP16.04■□□□□ 0.16
NOTCH3-204ENST00000597756 FKBP5Q13451 457 aaPredicted RBP16.04■□□□□ 0.16
NOTCH3-204ENST00000597756 SF3B3Q15393 1217 aaKnown RBP16.04■□□□□ 0.16
NOTCH3-204ENST00000597756 ALDH1L2Q3SY69 923 aa16.04■□□□□ 0.16
NOTCH3-204ENST00000597756 CWC25Q9NXE8 425 aaPredicted RBP16.04■□□□□ 0.16
NOTCH3-204ENST00000597756 TAF1P21675 1872 aa16.03■□□□□ 0.16
NOTCH3-204ENST00000597756 NEURL1BA8MQ27 555 aa16.03■□□□□ 0.16
NOTCH3-204ENST00000597756 NFKBIEO00221 500 aa16.03■□□□□ 0.16
NOTCH3-204ENST00000597756 C21orf2O43822 256 aa16.03■□□□□ 0.16
NOTCH3-204ENST00000597756 BRPF1P55201 1214 aaPredicted RBP16.03■□□□□ 0.16
NOTCH3-204ENST00000597756 SNED1Q8TER0 1413 aa16.02■□□□□ 0.16
NOTCH3-204ENST00000597756 H7C1W4 665 aa16.02■□□□□ 0.16
NOTCH3-204ENST00000597756 IRS4O14654 1257 aaPredicted RBP16.02■□□□□ 0.16
NOTCH3-204ENST00000597756 PRELPP51888 382 aa16.02■□□□□ 0.16
NOTCH3-204ENST00000597756 NEXNQ0ZGT2 675 aa16.02■□□□□ 0.16
NOTCH3-204ENST00000597756 CWF19L2Q2TBE0 894 aaKnown RBP16.02■□□□□ 0.16
NOTCH3-204ENST00000597756 LINS1Q8NG48 757 aa16.02■□□□□ 0.16
NOTCH3-204ENST00000597756 RBM17Q96I25 401 aaKnown RBP16.02■□□□□ 0.16
NOTCH3-204ENST00000597756 DICER1Q9UPY3 1922 aaKnown RBP16.02■□□□□ 0.15
NOTCH3-204ENST00000597756 ZBED9Q6R2W3 1325 aa16.01■□□□□ 0.15
NOTCH3-204ENST00000597756 CDHR2Q9BYE9 1310 aa16.01■□□□□ 0.15
NOTCH3-204ENST00000597756 LTBP3Q9NS15 1303 aa16.01■□□□□ 0.15
NOTCH3-204ENST00000597756 F6X3S4 739 aa16.01■□□□□ 0.15
NOTCH3-204ENST00000597756 CASP7P55210 303 aa16.01■□□□□ 0.15
NOTCH3-204ENST00000597756 BEND3Q5T5X7 828 aa16.01■□□□□ 0.15
NOTCH3-204ENST00000597756 RPGRQ92834 1020 aaKnown RBP16.01■□□□□ 0.15
NOTCH3-204ENST00000597756 GCKRQ14397 625 aa16■□□□□ 0.15
NOTCH3-204ENST00000597756 RTL5Q5HYW3 569 aaPredicted RBP16■□□□□ 0.15
NOTCH3-204ENST00000597756 SOGA3Q5TF21 947 aa16■□□□□ 0.15
NOTCH3-204ENST00000597756 MYH3P11055 1940 aa16■□□□□ 0.15
NOTCH3-204ENST00000597756 BBOX1O75936 387 aa15.99■□□□□ 0.15
NOTCH3-204ENST00000597756 HSP90B1P14625 803 aaKnown RBP15.99■□□□□ 0.15
NOTCH3-204ENST00000597756 JARID2Q92833 1246 aaPredicted RBP15.99■□□□□ 0.15
NOTCH3-204ENST00000597756 ZNF219Q9P2Y4 722 aaPredicted RBP15.99■□□□□ 0.15
NOTCH3-204ENST00000597756 ABCC4O15439 1325 aa15.98■□□□□ 0.15
NOTCH3-204ENST00000597756 PTPRCP08575 1304 aa15.98■□□□□ 0.15
NOTCH3-204ENST00000597756 PDE8AO60658 829 aa15.98■□□□□ 0.15
NOTCH3-204ENST00000597756 RARSP54136 660 aaKnown RBP15.98■□□□□ 0.15
NOTCH3-204ENST00000597756 RASSF7Q02833 373 aa15.98■□□□□ 0.15
NOTCH3-204ENST00000597756 C9orf131Q5VYM1 1079 aa15.98■□□□□ 0.15
NOTCH3-204ENST00000597756 CC2D2BQ6DHV5 1058 aa15.98■□□□□ 0.15
NOTCH3-204ENST00000597756 OLFM4Q6UX06 510 aa15.98■□□□□ 0.15
NOTCH3-204ENST00000597756 ZNF784Q8NCA9 323 aaPredicted RBP15.98■□□□□ 0.15
NOTCH3-204ENST00000597756 PLA2G12BQ9BX93 195 aa15.98■□□□□ 0.15
NOTCH3-204ENST00000597756 LMNB1P20700 586 aa15.97■□□□□ 0.15
NOTCH3-204ENST00000597756 GRAPQ13588 217 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms