RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 RRP7AQ9Y3A4 280 aaKnown RBP21.86■■□□□ 1.09
SHKBP1-215ENST00000597649 MAP3K15Q6ZN16 1313 aa21.85■■□□□ 1.09
SHKBP1-215ENST00000597649 UBN2Q6ZU65 1347 aa21.85■■□□□ 1.09
SHKBP1-215ENST00000597649 GPTP24298 496 aa21.85■■□□□ 1.09
SHKBP1-215ENST00000597649 SUSD4Q5VX71 490 aa21.85■■□□□ 1.09
SHKBP1-215ENST00000597649 JDP2Q8WYK2 163 aa21.85■■□□□ 1.09
SHKBP1-215ENST00000597649 NYXQ9GZU5 481 aa21.85■■□□□ 1.09
SHKBP1-215ENST00000597649 GJA3Q9Y6H8 435 aa21.85■■□□□ 1.09
SHKBP1-215ENST00000597649 EIF4A1P60842 406 aaKnown RBP21.84■■□□□ 1.09
SHKBP1-215ENST00000597649 C3orf67Q6ZVT6 689 aa21.84■■□□□ 1.09
SHKBP1-215ENST00000597649 MYL6BP14649 208 aa21.83■■□□□ 1.09
SHKBP1-215ENST00000597649 EPS15P42566 896 aa21.83■■□□□ 1.09
SHKBP1-215ENST00000597649 CC2D2BQ6DHV5 1058 aa21.83■■□□□ 1.09
SHKBP1-215ENST00000597649 THUMPD2Q9BTF0 503 aaKnown RBP21.83■■□□□ 1.09
SHKBP1-215ENST00000597649 ZBTB3Q9H5J0 574 aa21.83■■□□□ 1.09
SHKBP1-215ENST00000597649 DDX21Q9NR30 783 aaKnown RBP eCLIP21.83■■□□□ 1.09
SHKBP1-215ENST00000597649 WDR33Q9C0J8 1336 aaKnown RBP21.82■■□□□ 1.08
SHKBP1-215ENST00000597649 TCERG1O14776 1098 aaKnown RBP21.82■■□□□ 1.08
SHKBP1-215ENST00000597649 HSPA8P11142 646 aaKnown RBP21.82■■□□□ 1.08
SHKBP1-215ENST00000597649 SCNN1DP51172 638 aa21.82■■□□□ 1.08
SHKBP1-215ENST00000597649 EIF6P56537 245 aaKnown RBP21.82■■□□□ 1.08
SHKBP1-215ENST00000597649 ZNF34Q8IZ26 560 aa21.81■■□□□ 1.08
SHKBP1-215ENST00000597649 LARGE2Q8N3Y3 721 aa21.81■■□□□ 1.08
SHKBP1-215ENST00000597649 PNISRQ8TF01 805 aaKnown RBP21.81■■□□□ 1.08
SHKBP1-215ENST00000597649 RPGRQ92834 1020 aaKnown RBP21.81■■□□□ 1.08
SHKBP1-215ENST00000597649 PLEKHF1Q96S99 279 aa21.81■■□□□ 1.08
SHKBP1-215ENST00000597649 ABT1Q9ULW3 272 aaKnown RBP21.81■■□□□ 1.08
SHKBP1-215ENST00000597649 LTBP1Q14766 1721 aa21.8■■□□□ 1.08
SHKBP1-215ENST00000597649 KIF6Q6ZMV9 814 aa21.8■■□□□ 1.08
SHKBP1-215ENST00000597649 CRAMP1Q96RY5 1269 aa21.8■■□□□ 1.08
SHKBP1-215ENST00000597649 NTSR2O95665 410 aa21.79■■□□□ 1.08
SHKBP1-215ENST00000597649 CST9Q5W186 159 aa21.79■■□□□ 1.08
SHKBP1-215ENST00000597649 RBM17Q96I25 401 aaKnown RBP21.79■■□□□ 1.08
SHKBP1-215ENST00000597649 NUP98P52948 1817 aa21.78■■□□□ 1.08
SHKBP1-215ENST00000597649 IBTKQ9P2D0 1353 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-215ENST00000597649 TRAF5O00463 557 aa21.77■■□□□ 1.08
SHKBP1-215ENST00000597649 PPEF1O14829 653 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-215ENST00000597649 LMOD1P29536 600 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-215ENST00000597649 MAP2K1Q02750 393 aaPredicted RBP21.77■■□□□ 1.08
SHKBP1-215ENST00000597649 GIGYF2Q6Y7W6 1299 aaKnown RBP21.77■■□□□ 1.08
SHKBP1-215ENST00000597649 LRP10Q7Z4F1 713 aa21.77■■□□□ 1.08
SHKBP1-215ENST00000597649 RIC1Q4ADV7 1423 aa21.77■■□□□ 1.08
SHKBP1-215ENST00000597649 NFE2L2Q16236 605 aa21.76■■□□□ 1.07
SHKBP1-215ENST00000597649 GRIPAP1Q4V328 841 aa21.76■■□□□ 1.07
SHKBP1-215ENST00000597649 LAMB4A4D0S4 1761 aa21.76■■□□□ 1.07
SHKBP1-215ENST00000597649 PDIA6Q15084 440 aa21.75■■□□□ 1.07
SHKBP1-215ENST00000597649 USP50Q70EL3 339 aaPredicted RBP21.75■■□□□ 1.07
SHKBP1-215ENST00000597649 AOC3Q16853 763 aa21.74■■□□□ 1.07
SHKBP1-215ENST00000597649 SLC10A5Q5PT55 438 aa21.74■■□□□ 1.07
SHKBP1-215ENST00000597649 CYP4F22Q6NT55 531 aa21.74■■□□□ 1.07
SHKBP1-215ENST00000597649 ABHD8Q96I13 439 aa21.74■■□□□ 1.07
SHKBP1-215ENST00000597649 CAPNS2Q96L46 248 aa21.74■■□□□ 1.07
SHKBP1-215ENST00000597649 KDM3BQ7LBC6 1761 aa21.74■■□□□ 1.07
SHKBP1-215ENST00000597649 PPIP5K2O43314 1243 aa21.73■■□□□ 1.07
SHKBP1-215ENST00000597649 PPP1R42Q7Z4L9 355 aa21.73■■□□□ 1.07
SHKBP1-215ENST00000597649 NIM1KQ8IY84 436 aa21.73■■□□□ 1.07
SHKBP1-215ENST00000597649 NLRP3Q96P20 1036 aa21.73■■□□□ 1.07
SHKBP1-215ENST00000597649 ATP6V0A2Q9Y487 856 aa21.73■■□□□ 1.07
SHKBP1-215ENST00000597649 CXCL9Q07325 125 aa21.72■■□□□ 1.07
SHKBP1-215ENST00000597649 PROSER3Q2NL68 480 aa21.72■■□□□ 1.07
SHKBP1-215ENST00000597649 GPR101Q96P66 508 aaPredicted RBP21.72■■□□□ 1.07
SHKBP1-215ENST00000597649 GPRC5DQ9NZD1 345 aa21.72■■□□□ 1.07
SHKBP1-215ENST00000597649 DLG5Q8TDM6 1919 aa21.72■■□□□ 1.07
SHKBP1-215ENST00000597649 ANXA1P04083 346 aa21.71■■□□□ 1.07
SHKBP1-215ENST00000597649 NEFMP07197 916 aa21.71■■□□□ 1.07
SHKBP1-215ENST00000597649 GRM1Q13255 1194 aa21.71■■□□□ 1.07
SHKBP1-215ENST00000597649 PARP10Q53GL7 1025 aa21.71■■□□□ 1.07
SHKBP1-215ENST00000597649 UTP14AQ9BVJ6 771 aaKnown RBP21.71■■□□□ 1.07
SHKBP1-215ENST00000597649 TLL2Q9Y6L7 1015 aa21.71■■□□□ 1.07
SHKBP1-215ENST00000597649 ERBB4Q15303 1308 aa21.71■■□□□ 1.07
SHKBP1-215ENST00000597649 EIF2S2P20042 333 aaKnown RBP21.7■■□□□ 1.06
SHKBP1-215ENST00000597649 PAXIP1Q6ZW49 1069 aaPredicted RBP21.7■■□□□ 1.06
SHKBP1-215ENST00000597649 RTFDC1Q9BY42 306 aaPredicted RBP21.7■■□□□ 1.06
SHKBP1-215ENST00000597649 ADARB2Q9NS39 739 aaKnown RBP21.7■■□□□ 1.06
SHKBP1-215ENST00000597649 ZNRF3Q9ULT6 936 aa21.7■■□□□ 1.06
SHKBP1-215ENST00000597649 ABCC4O15439 1325 aa21.7■■□□□ 1.06
SHKBP1-215ENST00000597649 AOC2O75106 756 aa21.69■■□□□ 1.06
SHKBP1-215ENST00000597649 VPS33BQ9H267 617 aa21.69■■□□□ 1.06
SHKBP1-215ENST00000597649 TSPYL4Q9UJ04 414 aa21.69■■□□□ 1.06
SHKBP1-215ENST00000597649 ECE1P42892 770 aa21.68■■□□□ 1.06
SHKBP1-215ENST00000597649 GMPSP49915 693 aaPredicted RBP21.68■■□□□ 1.06
SHKBP1-215ENST00000597649 HCLS1P14317 486 aaPredicted RBP21.67■■□□□ 1.06
SHKBP1-215ENST00000597649 HIRAP54198 1017 aaPredicted RBP21.67■■□□□ 1.06
SHKBP1-215ENST00000597649 GLIS2Q9BZE0 524 aaPredicted RBP21.67■■□□□ 1.06
SHKBP1-215ENST00000597649 PGAP2Q9UHJ9 254 aa21.67■■□□□ 1.06
SHKBP1-215ENST00000597649 TSKSQ9UJT2 592 aa21.67■■□□□ 1.06
SHKBP1-215ENST00000597649 BBOX1O75936 387 aa21.66■■□□□ 1.06
SHKBP1-215ENST00000597649 SAPCD2Q86UD0 394 aa21.66■■□□□ 1.06
SHKBP1-215ENST00000597649 SP8Q8IXZ3 490 aa21.66■■□□□ 1.06
SHKBP1-215ENST00000597649 CELF2O95319 508 aaKnown RBP21.65■■□□□ 1.06
SHKBP1-215ENST00000597649 DPP8Q6V1X1 898 aaPredicted RBP21.65■■□□□ 1.06
SHKBP1-215ENST00000597649 NLRP10Q86W26 655 aa21.65■■□□□ 1.06
SHKBP1-215ENST00000597649 TMX4Q9H1E5 349 aaPredicted RBP21.65■■□□□ 1.06
SHKBP1-215ENST00000597649 SHTN1A0MZ66 631 aa21.64■■□□□ 1.05
SHKBP1-215ENST00000597649 RAD17O75943 681 aa21.64■■□□□ 1.05
SHKBP1-215ENST00000597649 MAP2K2P36507 400 aa21.64■■□□□ 1.05
SHKBP1-215ENST00000597649 KIAA2012Q0VF49 1180 aa21.64■■□□□ 1.05
SHKBP1-215ENST00000597649 COPS6Q7L5N1 327 aa21.64■■□□□ 1.05
SHKBP1-215ENST00000597649 MPNDQ8N594 471 aa21.64■■□□□ 1.05
SHKBP1-215ENST00000597649 SUPT20HQ8NEM7 779 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms