RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 LRRC37AA6NMS7 1700 aa15.16■□□□□ 0.02
SYMPK-207ENST00000596824 CCDC27Q2M243 656 aa15.15■□□□□ 0.02
SYMPK-207ENST00000596824 SOGA3Q5TF21 947 aa15.15■□□□□ 0.02
SYMPK-207ENST00000596824 PPP1R42Q7Z4L9 355 aa15.15■□□□□ 0.02
SYMPK-207ENST00000596824 DBF4Q9UBU7 674 aaPredicted RBP15.15■□□□□ 0.02
SYMPK-207ENST00000596824 SNED1Q8TER0 1413 aa15.15■□□□□ 0.02
SYMPK-207ENST00000596824 KDM2BQ8NHM5 1336 aa15.15■□□□□ 0.02
SYMPK-207ENST00000596824 SENP3-EIF4A1A0A087X0R7 540 aa15.14■□□□□ 0.01
SYMPK-207ENST00000596824 HSP90AB3PQ58FF7 597 aa15.14■□□□□ 0.01
SYMPK-207ENST00000596824 TAOK3Q9H2K8 898 aa15.14■□□□□ 0.01
SYMPK-207ENST00000596824 SPEF2Q9C093 1822 aa15.13■□□□□ 0.01
SYMPK-207ENST00000596824 TCIRG1Q13488 830 aa15.13■□□□□ 0.01
SYMPK-207ENST00000596824 CCDC93Q567U6 631 aa15.13■□□□□ 0.01
SYMPK-207ENST00000596824 WWC1Q8IX03 1113 aa15.13■□□□□ 0.01
SYMPK-207ENST00000596824 C8orf58Q8NAV2 365 aa15.13■□□□□ 0.01
SYMPK-207ENST00000596824 PLBD2Q8NHP8 589 aa15.13■□□□□ 0.01
SYMPK-207ENST00000596824 UTP14AQ9BVJ6 771 aaKnown RBP15.13■□□□□ 0.01
SYMPK-207ENST00000596824 RNF123Q5XPI4 1314 aa15.13■□□□□ 0.01
SYMPK-207ENST00000596824 ELL2O00472 640 aaPredicted RBP15.12■□□□□ 0.01
SYMPK-207ENST00000596824 ALDH1B1P30837 517 aa15.12■□□□□ 0.01
SYMPK-207ENST00000596824 HOXA10P31260 410 aaPredicted RBP15.12■□□□□ 0.01
SYMPK-207ENST00000596824 NCBP3Q53F19 620 aaKnown RBP15.12■□□□□ 0.01
SYMPK-207ENST00000596824 OLFM4Q6UX06 510 aa15.12■□□□□ 0.01
SYMPK-207ENST00000596824 C3orf67Q6ZVT6 689 aa15.12■□□□□ 0.01
SYMPK-207ENST00000596824 NLRP10Q86W26 655 aa15.12■□□□□ 0.01
SYMPK-207ENST00000596824 HYPKQ9NX55 129 aa15.12■□□□□ 0.01
SYMPK-207ENST00000596824 SLC10A5Q5PT55 438 aa15.11■□□□□ 0.01
SYMPK-207ENST00000596824 ANKRD13DQ6ZTN6 518 aa15.11■□□□□ 0.01
SYMPK-207ENST00000596824 RPGRQ92834 1020 aaKnown RBP15.11■□□□□ 0.01
SYMPK-207ENST00000596824 TSR2Q969E8 191 aaKnown RBP15.11■□□□□ 0.01
SYMPK-207ENST00000596824 COL4A1P02462 1669 aa15.1■□□□□ 0.01
SYMPK-207ENST00000596824 GLTPD2A6NH11 291 aa15.1■□□□□ 0.01
SYMPK-207ENST00000596824 TSPYL6Q8N831 410 aa15.1■□□□□ 0.01
SYMPK-207ENST00000596824 IL16Q14005 1332 aa15.1■□□□□ 0.01
SYMPK-207ENST00000596824 COL4A5P29400 1685 aa15.09■□□□□ 0.01
SYMPK-207ENST00000596824 LTBP1Q14766 1721 aa15.09■□□□□ 0.01
SYMPK-207ENST00000596824 TOMM70O94826 608 aa15.09■□□□□ 0.01
SYMPK-207ENST00000596824 FKBP4Q02790 459 aaKnown RBP eCLIP15.09■□□□□ 0.01
SYMPK-207ENST00000596824 RTKN2Q8IZC4 609 aa15.09■□□□□ 0.01
SYMPK-207ENST00000596824 RBM17Q96I25 401 aaKnown RBP15.09■□□□□ 0.01
SYMPK-207ENST00000596824 NLRP3Q96P20 1036 aa15.09■□□□□ 0.01
SYMPK-207ENST00000596824 CRAMP1Q96RY5 1269 aa15.09■□□□□ 0.01
SYMPK-207ENST00000596824 ISCA1Q9BUE6 129 aa15.09■□□□□ 0.01
SYMPK-207ENST00000596824 PHAXQ9H814 394 aaKnown RBP15.09■□□□□ 0.01
SYMPK-207ENST00000596824 RRAGCQ9HB90 399 aa15.09■□□□□ 0.01
SYMPK-207ENST00000596824 SYNE4Q8N205 404 aa15.08■□□□□ 0
SYMPK-207ENST00000596824 TRMT112Q9UI30 125 aaKnown RBP15.08■□□□□ 0
SYMPK-207ENST00000596824 SH3TC1Q8TE82 1336 aa15.08■□□□□ 0
SYMPK-207ENST00000596824 HSPA6P17066 643 aa15.07■□□□□ 0
SYMPK-207ENST00000596824 CCDC30Q5VVM6 783 aa15.07■□□□□ 0
SYMPK-207ENST00000596824 RBM46Q8TBY0 533 aaKnown RBP15.07■□□□□ 0
SYMPK-207ENST00000596824 ABCC4O15439 1325 aa15.07■□□□□ 0
SYMPK-207ENST00000596824 DUOX1Q9NRD9 1551 aa15.07■□□□□ 0
SYMPK-207ENST00000596824 ADAMTSL1Q8N6G6 1762 aa15.06■□□□□ 0
SYMPK-207ENST00000596824 ATP5J2-PTCD1G3V325 749 aa15.06■□□□□ 0
SYMPK-207ENST00000596824 PPEF1O14829 653 aaPredicted RBP15.06■□□□□ 0
SYMPK-207ENST00000596824 HCLS1P14317 486 aaPredicted RBP15.06■□□□□ 0
SYMPK-207ENST00000596824 GOLGA2Q08379 1002 aa15.06■□□□□ 0
SYMPK-207ENST00000596824 CC2D2BQ6DHV5 1058 aa15.06■□□□□ 0
SYMPK-207ENST00000596824 SLC51AQ86UW1 340 aa15.06■□□□□ 0
SYMPK-207ENST00000596824 ZNF428Q96B54 188 aa15.06■□□□□ 0
SYMPK-207ENST00000596824 ZNF277Q9NRM2 450 aaPredicted RBP15.06■□□□□ 0
SYMPK-207ENST00000596824 TWISTNBQ3B726 338 aaPredicted RBP15.05■□□□□ -0
SYMPK-207ENST00000596824 RIC3Q7Z5B4 369 aa15.05■□□□□ -0
SYMPK-207ENST00000596824 C16orf71Q8IYS4 520 aaPredicted RBP15.05■□□□□ -0
SYMPK-207ENST00000596824 FAM9BQ8IZU0 186 aa15.05■□□□□ -0
SYMPK-207ENST00000596824 PSMD1Q99460 953 aa15.05■□□□□ -0
SYMPK-207ENST00000596824 CHMP4AQ9BY43 222 aa15.05■□□□□ -0
SYMPK-207ENST00000596824 SALL2Q9Y467 1007 aaPredicted RBP15.05■□□□□ -0
SYMPK-207ENST00000596824 FANCIQ9NVI1 1328 aa15.05■□□□□ -0
SYMPK-207ENST00000596824 PSME4Q14997 1843 aa15.04■□□□□ -0
SYMPK-207ENST00000596824 POTECB2RU33 542 aa15.04■□□□□ -0
SYMPK-207ENST00000596824 VEGFAP15692 232 aaPredicted RBP15.04■□□□□ -0
SYMPK-207ENST00000596824 IARSP41252 1262 aaKnown RBP15.04■□□□□ -0
SYMPK-207ENST00000596824 TRIM28Q13263 835 aaKnown RBP15.04■□□□□ -0
SYMPK-207ENST00000596824 DPY19L2Q6NUT2 758 aa15.04■□□□□ -0
SYMPK-207ENST00000596824 WDR63Q8IWG1 891 aa15.04■□□□□ -0
SYMPK-207ENST00000596824 FAM89AQ96GI7 184 aa15.04■□□□□ -0
SYMPK-207ENST00000596824 A0A1B0GUL6 1792 aa15.03■□□□□ -0
SYMPK-207ENST00000596824 ZNF541Q9H0D2 1346 aa15.03■□□□□ -0
SYMPK-207ENST00000596824 GRIPAP1Q4V328 841 aa15.03■□□□□ -0
SYMPK-207ENST00000596824 ATP6V0A2Q9Y487 856 aa15.03■□□□□ -0
SYMPK-207ENST00000596824 TCERG1O14776 1098 aaKnown RBP15.02■□□□□ -0
SYMPK-207ENST00000596824 DDNO94850 711 aaPredicted RBP15.02■□□□□ -0
SYMPK-207ENST00000596824 FSTL1Q12841 308 aa15.02■□□□□ -0
SYMPK-207ENST00000596824 MYD88Q99836 296 aa15.02■□□□□ -0
SYMPK-207ENST00000596824 STK31Q9BXU1 1019 aa15.02■□□□□ -0
SYMPK-207ENST00000596824 DDX58O95786 925 aaKnown RBP15.01□□□□□ -0.01
SYMPK-207ENST00000596824 GRAPQ13588 217 aa15.01□□□□□ -0.01
SYMPK-207ENST00000596824 DDX46Q7L014 1031 aaKnown RBP15.01□□□□□ -0.01
SYMPK-207ENST00000596824 GRAPLQ8TC17 118 aaPredicted RBP15.01□□□□□ -0.01
SYMPK-207ENST00000596824 METTL22Q9BUU2 404 aaPredicted RBP15.01□□□□□ -0.01
SYMPK-207ENST00000596824 FZD9O00144 591 aa15□□□□□ -0.01
SYMPK-207ENST00000596824 BBOX1O75936 387 aa15□□□□□ -0.01
SYMPK-207ENST00000596824 SF3B3Q15393 1217 aaKnown RBP15□□□□□ -0.01
SYMPK-207ENST00000596824 RTL5Q5HYW3 569 aaPredicted RBP15□□□□□ -0.01
SYMPK-207ENST00000596824 KSR2Q6VAB6 950 aa15□□□□□ -0.01
SYMPK-207ENST00000596824 G2E3Q7L622 706 aa15□□□□□ -0.01
SYMPK-207ENST00000596824 ZBTB38Q8NAP3 1195 aaPredicted RBP15□□□□□ -0.01
SYMPK-207ENST00000596824 CCDC191Q8NCU4 936 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms