RNA–Protein interactions for RNA: ENST00000596714.1

SMG9-204, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-204ENST00000596714 NLGN2Q8NFZ4 835 aa22■■□□□ 1.11
SMG9-204ENST00000596714 CWC25Q9NXE8 425 aaPredicted RBP22■■□□□ 1.11
SMG9-204ENST00000596714 SH3TC1Q8TE82 1336 aa22■■□□□ 1.11
SMG9-204ENST00000596714 HSP90B1P14625 803 aaKnown RBP21.99■■□□□ 1.11
SMG9-204ENST00000596714 BRPF1P55201 1214 aaPredicted RBP21.99■■□□□ 1.11
SMG9-204ENST00000596714 NUTM1Q86Y26 1132 aa21.99■■□□□ 1.11
SMG9-204ENST00000596714 CCDC24Q8N4L8 307 aa21.99■■□□□ 1.11
SMG9-204ENST00000596714 H0YIN7 160 aa21.98■■□□□ 1.11
SMG9-204ENST00000596714 ERFEQ4G0M1 354 aa21.98■■□□□ 1.11
SMG9-204ENST00000596714 LINS1Q8NG48 757 aa21.98■■□□□ 1.11
SMG9-204ENST00000596714 PXDNLA1KZ92 1463 aa21.97■■□□□ 1.11
SMG9-204ENST00000596714 F6X3S4 739 aa21.97■■□□□ 1.11
SMG9-204ENST00000596714 IPO8O15397 1037 aaKnown RBP21.97■■□□□ 1.11
SMG9-204ENST00000596714 SLC4A10Q6U841 1118 aa21.97■■□□□ 1.11
SMG9-204ENST00000596714 C2CD5Q86YS7 1000 aa21.97■■□□□ 1.11
SMG9-204ENST00000596714 A0A0G2JLW4 131 aa21.96■■□□□ 1.11
SMG9-204ENST00000596714 DPEP1P16444 411 aa21.96■■□□□ 1.11
SMG9-204ENST00000596714 API5Q9BZZ5 524 aaKnown RBP21.96■■□□□ 1.11
SMG9-204ENST00000596714 NOB1Q9ULX3 412 aaKnown RBP21.96■■□□□ 1.11
SMG9-204ENST00000596714 RIC1Q4ADV7 1423 aa21.96■■□□□ 1.11
SMG9-204ENST00000596714 NEURL1BA8MQ27 555 aa21.95■■□□□ 1.1
SMG9-204ENST00000596714 IGKV5-2P06315 115 aa21.95■■□□□ 1.1
SMG9-204ENST00000596714 CWF19L2Q2TBE0 894 aaKnown RBP21.95■■□□□ 1.1
SMG9-204ENST00000596714 ZBTB38Q8NAP3 1195 aaPredicted RBP21.95■■□□□ 1.1
SMG9-204ENST00000596714 NLRP3Q96P20 1036 aa21.95■■□□□ 1.1
SMG9-204ENST00000596714 CHRNA5P30532 468 aa21.94■■□□□ 1.1
SMG9-204ENST00000596714 PELP1Q8IZL8 1130 aaKnown RBP21.94■■□□□ 1.1
SMG9-204ENST00000596714 ARHGAP45Q92619 1136 aa21.94■■□□□ 1.1
SMG9-204ENST00000596714 FAM89AQ96GI7 184 aa21.94■■□□□ 1.1
SMG9-204ENST00000596714 SRCIN1Q9C0H9 1055 aa21.94■■□□□ 1.1
SMG9-204ENST00000596714 PIM2Q9P1W9 311 aa21.94■■□□□ 1.1
SMG9-204ENST00000596714 ABCC12Q96J65 1359 aa21.94■■□□□ 1.1
SMG9-204ENST00000596714 N4BP2Q86UW6 1770 aaPredicted RBP21.94■■□□□ 1.1
SMG9-204ENST00000596714 PCCAP05165 728 aaPredicted RBP21.93■■□□□ 1.1
SMG9-204ENST00000596714 SLC10A5Q5PT55 438 aa21.93■■□□□ 1.1
SMG9-204ENST00000596714 BEND3Q5T5X7 828 aa21.93■■□□□ 1.1
SMG9-204ENST00000596714 ANKRD31Q8N7Z5 1873 aa21.93■■□□□ 1.1
SMG9-204ENST00000596714 FRAT1Q92837 279 aaPredicted RBP21.93■■□□□ 1.1
SMG9-204ENST00000596714 BCAR3O75815 825 aa21.92■■□□□ 1.1
SMG9-204ENST00000596714 ALDH1L1O75891 902 aa21.92■■□□□ 1.1
SMG9-204ENST00000596714 GCKRQ14397 625 aa21.92■■□□□ 1.1
SMG9-204ENST00000596714 GPR162Q16538 588 aa21.92■■□□□ 1.1
SMG9-204ENST00000596714 RTL5Q5HYW3 569 aaPredicted RBP21.92■■□□□ 1.1
SMG9-204ENST00000596714 RPGRQ92834 1020 aaKnown RBP21.92■■□□□ 1.1
SMG9-204ENST00000596714 ZNF622Q969S3 477 aaKnown RBP eCLIP21.92■■□□□ 1.1
SMG9-204ENST00000596714 MASTLQ96GX5 879 aa21.92■■□□□ 1.1
SMG9-204ENST00000596714 KLRG2A4D1S0 409 aaPredicted RBP21.91■■□□□ 1.1
SMG9-204ENST00000596714 NPR1P16066 1061 aa21.91■■□□□ 1.1
SMG9-204ENST00000596714 KIAA1551Q9HCM1 1747 aa21.91■■□□□ 1.1
SMG9-204ENST00000596714 IRS4O14654 1257 aaPredicted RBP21.9■■□□□ 1.1
SMG9-204ENST00000596714 SRGNP10124 158 aa21.9■■□□□ 1.1
SMG9-204ENST00000596714 HCLS1P14317 486 aaPredicted RBP21.9■■□□□ 1.1
SMG9-204ENST00000596714 DALRD3Q5D0E6 543 aaKnown RBP21.9■■□□□ 1.1
SMG9-204ENST00000596714 STYK1Q6J9G0 422 aa21.9■■□□□ 1.1
SMG9-204ENST00000596714 CNKSR1Q969H4 720 aa21.9■■□□□ 1.1
SMG9-204ENST00000596714 RCAN3Q9UKA8 241 aa21.9■■□□□ 1.1
SMG9-204ENST00000596714 KCNA3P22001 575 aa21.89■■□□□ 1.09
SMG9-204ENST00000596714 CCT4P50991 539 aaKnown RBP21.89■■□□□ 1.09
SMG9-204ENST00000596714 ZKSCAN2Q63HK3 967 aa21.89■■□□□ 1.09
SMG9-204ENST00000596714 TTLL6Q8N841 843 aa21.89■■□□□ 1.09
SMG9-204ENST00000596714 C9orf78Q9NZ63 289 aaPredicted RBP21.89■■□□□ 1.09
SMG9-204ENST00000596714 DLEC1Q9Y238 1755 aa21.89■■□□□ 1.09
SMG9-204ENST00000596714 CDHR2Q9BYE9 1310 aa21.88■■□□□ 1.09
SMG9-204ENST00000596714 CRY2Q49AN0 593 aa21.88■■□□□ 1.09
SMG9-204ENST00000596714 ATF7IPQ6VMQ6 1270 aa21.88■■□□□ 1.09
SMG9-204ENST00000596714 SYNE4Q8N205 404 aa21.88■■□□□ 1.09
SMG9-204ENST00000596714 RBM17Q96I25 401 aaKnown RBP21.88■■□□□ 1.09
SMG9-204ENST00000596714 WWC3Q9ULE0 1092 aa21.88■■□□□ 1.09
SMG9-204ENST00000596714 BCS1LQ9Y276 419 aa21.88■■□□□ 1.09
SMG9-204ENST00000596714 ALDH1B1P30837 517 aa21.87■■□□□ 1.09
SMG9-204ENST00000596714 UBE3BQ7Z3V4 1068 aa21.87■■□□□ 1.09
SMG9-204ENST00000596714 TNRC6CQ9HCJ0 1690 aaKnown RBP21.87■■□□□ 1.09
SMG9-204ENST00000596714 COL11A2P13942 1736 aaPredicted RBP21.86■■□□□ 1.09
SMG9-204ENST00000596714 H7C1W4 665 aa21.86■■□□□ 1.09
SMG9-204ENST00000596714 GRIN3BO60391 1043 aa21.86■■□□□ 1.09
SMG9-204ENST00000596714 PDE8AO60658 829 aa21.86■■□□□ 1.09
SMG9-204ENST00000596714 LAMB2P55268 1798 aa21.85■■□□□ 1.09
SMG9-204ENST00000596714 GRM8O00222 908 aa21.85■■□□□ 1.09
SMG9-204ENST00000596714 FTSJ3Q8IY81 847 aaKnown RBP21.85■■□□□ 1.09
SMG9-204ENST00000596714 BRCA1P38398 1863 aaKnown RBP21.85■■□□□ 1.09
SMG9-204ENST00000596714 DDX60Q8IY21 1712 aaKnown RBP21.84■■□□□ 1.09
SMG9-204ENST00000596714 TRIM27P14373 513 aa21.84■■□□□ 1.09
SMG9-204ENST00000596714 DDX46Q7L014 1031 aaKnown RBP21.84■■□□□ 1.09
SMG9-204ENST00000596714 JARID2Q92833 1246 aaPredicted RBP21.84■■□□□ 1.09
SMG9-204ENST00000596714 MS4A1P11836 297 aa21.83■■□□□ 1.09
SMG9-204ENST00000596714 HOXA10P31260 410 aaPredicted RBP21.83■■□□□ 1.09
SMG9-204ENST00000596714 SF3B3Q15393 1217 aaKnown RBP21.83■■□□□ 1.09
SMG9-204ENST00000596714 CCDC152Q4G0S7 254 aa21.83■■□□□ 1.09
SMG9-204ENST00000596714 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.83■■□□□ 1.09
SMG9-204ENST00000596714 ABCC4O15439 1325 aa21.82■■□□□ 1.08
SMG9-204ENST00000596714 YBX3P16989 372 aaKnown RBP eCLIP21.82■■□□□ 1.08
SMG9-204ENST00000596714 PRPF40BQ6NWY9 871 aaKnown RBP21.82■■□□□ 1.08
SMG9-204ENST00000596714 C3orf67Q6ZVT6 689 aa21.82■■□□□ 1.08
SMG9-204ENST00000596714 CRAMP1Q96RY5 1269 aa21.82■■□□□ 1.08
SMG9-204ENST00000596714 TMX4Q9H1E5 349 aaPredicted RBP21.82■■□□□ 1.08
SMG9-204ENST00000596714 CTSWP56202 376 aa21.81■■□□□ 1.08
SMG9-204ENST00000596714 SOGA3Q5TF21 947 aa21.81■■□□□ 1.08
SMG9-204ENST00000596714 CLUAP1Q96AJ1 413 aa21.81■■□□□ 1.08
SMG9-204ENST00000596714 HDAC5Q9UQL6 1122 aa21.81■■□□□ 1.08
SMG9-204ENST00000596714 INTS3Q68E01 1043 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms