RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 NEXNQ0ZGT2 675 aa19.68■□□□□ 0.74
SMCO4-206ENST00000596676 PARP10Q53GL7 1025 aa19.68■□□□□ 0.74
SMCO4-206ENST00000596676 PANK1Q8TE04 598 aa19.68■□□□□ 0.74
SMCO4-206ENST00000596676 FAM89AQ96GI7 184 aa19.68■□□□□ 0.74
SMCO4-206ENST00000596676 UTP14AQ9BVJ6 771 aaKnown RBP19.68■□□□□ 0.74
SMCO4-206ENST00000596676 CWC25Q9NXE8 425 aaPredicted RBP19.68■□□□□ 0.74
SMCO4-206ENST00000596676 ABCC4O15439 1325 aa19.68■□□□□ 0.74
SMCO4-206ENST00000596676 KLHL34Q8N239 644 aa19.67■□□□□ 0.74
SMCO4-206ENST00000596676 CCDC191Q8NCU4 936 aa19.67■□□□□ 0.74
SMCO4-206ENST00000596676 SRCIN1Q9C0H9 1055 aa19.67■□□□□ 0.74
SMCO4-206ENST00000596676 TRMT112Q9UI30 125 aaKnown RBP19.67■□□□□ 0.74
SMCO4-206ENST00000596676 NRXN2Q9P2S2 1712 aa19.67■□□□□ 0.74
SMCO4-206ENST00000596676 ABCC12Q96J65 1359 aa19.67■□□□□ 0.74
SMCO4-206ENST00000596676 HCLS1P14317 486 aaPredicted RBP19.66■□□□□ 0.74
SMCO4-206ENST00000596676 GCKRQ14397 625 aa19.66■□□□□ 0.74
SMCO4-206ENST00000596676 PPP1R42Q7Z4L9 355 aa19.66■□□□□ 0.74
SMCO4-206ENST00000596676 TMEM57Q8N5G2 664 aa19.66■□□□□ 0.74
SMCO4-206ENST00000596676 CNBD1Q8NA66 436 aa19.66■□□□□ 0.74
SMCO4-206ENST00000596676 PPP1R1BQ9UD71 204 aaPredicted RBP19.66■□□□□ 0.74
SMCO4-206ENST00000596676 SUPT16HQ9Y5B9 1047 aaKnown RBP19.66■□□□□ 0.74
SMCO4-206ENST00000596676 TPTE2Q6XPS3 522 aa19.65■□□□□ 0.74
SMCO4-206ENST00000596676 C3orf67Q6ZVT6 689 aa19.65■□□□□ 0.74
SMCO4-206ENST00000596676 DZIP1LQ8IYY4 767 aaKnown RBP19.65■□□□□ 0.74
SMCO4-206ENST00000596676 NPHP1O15259 732 aa19.64■□□□□ 0.73
SMCO4-206ENST00000596676 GTF2E1P29083 439 aaPredicted RBP19.64■□□□□ 0.73
SMCO4-206ENST00000596676 RRP1P56182 461 aaKnown RBP19.64■□□□□ 0.73
SMCO4-206ENST00000596676 ANKRD31Q8N7Z5 1873 aa19.63■□□□□ 0.73
SMCO4-206ENST00000596676 H7C1W4 665 aa19.63■□□□□ 0.73
SMCO4-206ENST00000596676 ALDH1L1O75891 902 aa19.63■□□□□ 0.73
SMCO4-206ENST00000596676 INTS3Q68E01 1043 aaKnown RBP19.63■□□□□ 0.73
SMCO4-206ENST00000596676 ZBTB38Q8NAP3 1195 aaPredicted RBP19.63■□□□□ 0.73
SMCO4-206ENST00000596676 NYXQ9GZU5 481 aa19.63■□□□□ 0.73
SMCO4-206ENST00000596676 SH3TC1Q8TE82 1336 aa19.62■□□□□ 0.73
SMCO4-206ENST00000596676 PCCAP05165 728 aaPredicted RBP19.62■□□□□ 0.73
SMCO4-206ENST00000596676 CASP7P55210 303 aa19.62■□□□□ 0.73
SMCO4-206ENST00000596676 UBE3BQ7Z3V4 1068 aa19.62■□□□□ 0.73
SMCO4-206ENST00000596676 FHDC1Q9C0D6 1143 aaPredicted RBP19.62■□□□□ 0.73
SMCO4-206ENST00000596676 TNRC6CQ9HCJ0 1690 aaKnown RBP19.62■□□□□ 0.73
SMCO4-206ENST00000596676 PXDNLA1KZ92 1463 aa19.61■□□□□ 0.73
SMCO4-206ENST00000596676 C10orf71Q711Q0 1435 aa19.61■□□□□ 0.73
SMCO4-206ENST00000596676 NBPF7P0C2Y1 421 aaPredicted RBP19.61■□□□□ 0.73
SMCO4-206ENST00000596676 CCT4P50991 539 aaKnown RBP19.61■□□□□ 0.73
SMCO4-206ENST00000596676 FTSJ3Q8IY81 847 aaKnown RBP19.61■□□□□ 0.73
SMCO4-206ENST00000596676 NLGN2Q8NFZ4 835 aa19.61■□□□□ 0.73
SMCO4-206ENST00000596676 USP44Q9H0E7 712 aa19.61■□□□□ 0.73
SMCO4-206ENST00000596676 IBTKQ9P2D0 1353 aaPredicted RBP19.6■□□□□ 0.73
SMCO4-206ENST00000596676 A0A0G2JLW4 131 aa19.6■□□□□ 0.73
SMCO4-206ENST00000596676 GRM8O00222 908 aa19.6■□□□□ 0.73
SMCO4-206ENST00000596676 IRS4O14654 1257 aaPredicted RBP19.6■□□□□ 0.73
SMCO4-206ENST00000596676 CHRNA5P30532 468 aa19.6■□□□□ 0.73
SMCO4-206ENST00000596676 ST5P78524 1137 aa19.6■□□□□ 0.73
SMCO4-206ENST00000596676 C9orf78Q9NZ63 289 aaPredicted RBP19.6■□□□□ 0.73
SMCO4-206ENST00000596676 WWC3Q9ULE0 1092 aa19.6■□□□□ 0.73
SMCO4-206ENST00000596676 COG6Q9Y2V7 657 aa19.6■□□□□ 0.73
SMCO4-206ENST00000596676 N4BP2Q86UW6 1770 aaPredicted RBP19.6■□□□□ 0.73
SMCO4-206ENST00000596676 DDX60Q8IY21 1712 aaKnown RBP19.59■□□□□ 0.73
SMCO4-206ENST00000596676 SRCAPQ6ZRS2 3230 aa19.59■□□□□ 0.73
SMCO4-206ENST00000596676 LRP5O75197 1615 aa19.59■□□□□ 0.73
SMCO4-206ENST00000596676 SLC10A5Q5PT55 438 aa19.59■□□□□ 0.73
SMCO4-206ENST00000596676 ITPRIPQ8IWB1 547 aa19.59■□□□□ 0.73
SMCO4-206ENST00000596676 MEIS3Q99687 375 aa19.59■□□□□ 0.73
SMCO4-206ENST00000596676 BRIP1Q9BX63 1249 aa19.59■□□□□ 0.73
SMCO4-206ENST00000596676 RNF123Q5XPI4 1314 aa19.58■□□□□ 0.73
SMCO4-206ENST00000596676 EPHA10Q5JZY3 1008 aa19.58■□□□□ 0.72
SMCO4-206ENST00000596676 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.58■□□□□ 0.72
SMCO4-206ENST00000596676 KAZALD1Q96I82 304 aa19.58■□□□□ 0.72
SMCO4-206ENST00000596676 SUCLG2Q96I99 432 aa19.58■□□□□ 0.72
SMCO4-206ENST00000596676 CCDC85AQ96PX6 553 aaPredicted RBP19.58■□□□□ 0.72
SMCO4-206ENST00000596676 KIF13BQ9NQT8 1826 aa19.58■□□□□ 0.72
SMCO4-206ENST00000596676 DPEP1P16444 411 aa19.57■□□□□ 0.72
SMCO4-206ENST00000596676 LAMB2P55268 1798 aa19.57■□□□□ 0.72
SMCO4-206ENST00000596676 KIAA1551Q9HCM1 1747 aa19.56■□□□□ 0.72
SMCO4-206ENST00000596676 UTYO14607 1347 aa19.56■□□□□ 0.72
SMCO4-206ENST00000596676 IRX6P78412 446 aaPredicted RBP19.56■□□□□ 0.72
SMCO4-206ENST00000596676 C2CD5Q86YS7 1000 aa19.56■□□□□ 0.72
SMCO4-206ENST00000596676 SYT17Q9BSW7 474 aa19.56■□□□□ 0.72
SMCO4-206ENST00000596676 CD2APQ9Y5K6 639 aa19.56■□□□□ 0.72
SMCO4-206ENST00000596676 CDHR2Q9BYE9 1310 aa19.55■□□□□ 0.72
SMCO4-206ENST00000596676 COL11A2P13942 1736 aaPredicted RBP19.55■□□□□ 0.72
SMCO4-206ENST00000596676 KCNA3P22001 575 aa19.55■□□□□ 0.72
SMCO4-206ENST00000596676 FOXO4P98177 505 aa19.55■□□□□ 0.72
SMCO4-206ENST00000596676 PDE3AQ14432 1141 aa19.55■□□□□ 0.72
SMCO4-206ENST00000596676 ZBTB7BO15156 539 aaPredicted RBP19.54■□□□□ 0.72
SMCO4-206ENST00000596676 PDE8AO60658 829 aa19.54■□□□□ 0.72
SMCO4-206ENST00000596676 MVPQ14764 893 aaKnown RBP19.54■□□□□ 0.72
SMCO4-206ENST00000596676 SLC51AQ86UW1 340 aa19.54■□□□□ 0.72
SMCO4-206ENST00000596676 NLRP3Q96P20 1036 aa19.54■□□□□ 0.72
SMCO4-206ENST00000596676 TAF1P21675 1872 aa19.54■□□□□ 0.72
SMCO4-206ENST00000596676 COL4A1P02462 1669 aa19.53■□□□□ 0.72
SMCO4-206ENST00000596676 KLRG2A4D1S0 409 aaPredicted RBP19.53■□□□□ 0.72
SMCO4-206ENST00000596676 PDE6BP35913 854 aa19.53■□□□□ 0.72
SMCO4-206ENST00000596676 CRBNQ96SW2 442 aa19.53■□□□□ 0.72
SMCO4-206ENST00000596676 C1orf115Q9H7X2 142 aa19.53■□□□□ 0.72
SMCO4-206ENST00000596676 UBTFL1P0CB47 393 aaPredicted RBP19.52■□□□□ 0.72
SMCO4-206ENST00000596676 SRGNP10124 158 aa19.52■□□□□ 0.72
SMCO4-206ENST00000596676 MS4A1P11836 297 aa19.52■□□□□ 0.72
SMCO4-206ENST00000596676 ZNF622Q969S3 477 aaKnown RBP eCLIP19.52■□□□□ 0.72
SMCO4-206ENST00000596676 BICC1Q9H694 974 aaKnown RBP19.52■□□□□ 0.72
SMCO4-206ENST00000596676 LRRFIP2Q9Y608 721 aaKnown RBP19.52■□□□□ 0.72
SMCO4-206ENST00000596676 RIC1Q4ADV7 1423 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms