RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 NLRP10Q86W26 655 aa20.39■□□□□ 0.85
ZNF550-207ENST00000595560 UTP14AQ9BVJ6 771 aaKnown RBP20.39■□□□□ 0.85
ZNF550-207ENST00000595560 DICER1Q9UPY3 1922 aaKnown RBP20.39■□□□□ 0.85
ZNF550-207ENST00000595560 LAMB2P55268 1798 aa20.39■□□□□ 0.85
ZNF550-207ENST00000595560 FANCIQ9NVI1 1328 aa20.38■□□□□ 0.85
ZNF550-207ENST00000595560 CACNA1FO60840 1977 aa20.38■□□□□ 0.85
ZNF550-207ENST00000595560 NFKBIEO00221 500 aa20.38■□□□□ 0.85
ZNF550-207ENST00000595560 SOGA3Q5TF21 947 aa20.38■□□□□ 0.85
ZNF550-207ENST00000595560 GPBP1L1Q9HC44 474 aaPredicted RBP20.38■□□□□ 0.85
ZNF550-207ENST00000595560 RNF181Q9P0P0 153 aa20.38■□□□□ 0.85
ZNF550-207ENST00000595560 SALL2Q9Y467 1007 aaPredicted RBP20.38■□□□□ 0.85
ZNF550-207ENST00000595560 LMNB1P20700 586 aa20.37■□□□□ 0.85
ZNF550-207ENST00000595560 LTBP3Q9NS15 1303 aa20.36■□□□□ 0.85
ZNF550-207ENST00000595560 ALDH1B1P30837 517 aa20.36■□□□□ 0.85
ZNF550-207ENST00000595560 GOLGA2Q08379 1002 aa20.36■□□□□ 0.85
ZNF550-207ENST00000595560 TWISTNBQ3B726 338 aaPredicted RBP20.36■□□□□ 0.85
ZNF550-207ENST00000595560 C7orf43Q8WVR3 580 aa20.36■□□□□ 0.85
ZNF550-207ENST00000595560 PHAXQ9H814 394 aaKnown RBP20.36■□□□□ 0.85
ZNF550-207ENST00000595560 ZNF219Q9P2Y4 722 aaPredicted RBP20.36■□□□□ 0.85
ZNF550-207ENST00000595560 ZC3H4Q9UPT8 1303 aaKnown RBP20.35■□□□□ 0.85
ZNF550-207ENST00000595560 SLC10A5Q5PT55 438 aa20.35■□□□□ 0.85
ZNF550-207ENST00000595560 ZNF526Q8TF50 670 aaPredicted RBP20.35■□□□□ 0.85
ZNF550-207ENST00000595560 DDX60Q8IY21 1712 aaKnown RBP20.35■□□□□ 0.85
ZNF550-207ENST00000595560 HOXA10P31260 410 aaPredicted RBP20.34■□□□□ 0.85
ZNF550-207ENST00000595560 PRELPP51888 382 aa20.34■□□□□ 0.85
ZNF550-207ENST00000595560 RPGRQ92834 1020 aaKnown RBP20.34■□□□□ 0.85
ZNF550-207ENST00000595560 ISCA1Q9BUE6 129 aa20.34■□□□□ 0.85
ZNF550-207ENST00000595560 SH3TC1Q8TE82 1336 aa20.33■□□□□ 0.85
ZNF550-207ENST00000595560 CCER2I3L3R5 266 aa20.33■□□□□ 0.85
ZNF550-207ENST00000595560 TRIM28Q13263 835 aaKnown RBP20.33■□□□□ 0.85
ZNF550-207ENST00000595560 RIC3Q7Z5B4 369 aa20.33■□□□□ 0.85
ZNF550-207ENST00000595560 NLRP3Q96P20 1036 aa20.33■□□□□ 0.85
ZNF550-207ENST00000595560 STK31Q9BXU1 1019 aa20.33■□□□□ 0.85
ZNF550-207ENST00000595560 TAOK3Q9H2K8 898 aa20.33■□□□□ 0.85
ZNF550-207ENST00000595560 TRMT112Q9UI30 125 aaKnown RBP20.33■□□□□ 0.85
ZNF550-207ENST00000595560 ZNF521Q96K83 1311 aa20.32■□□□□ 0.84
ZNF550-207ENST00000595560 CCDC93Q567U6 631 aa20.32■□□□□ 0.84
ZNF550-207ENST00000595560 C3orf67Q6ZVT6 689 aa20.32■□□□□ 0.84
ZNF550-207ENST00000595560 DDX58O95786 925 aaKnown RBP20.31■□□□□ 0.84
ZNF550-207ENST00000595560 RBM17Q96I25 401 aaKnown RBP20.31■□□□□ 0.84
ZNF550-207ENST00000595560 CRAMP1Q96RY5 1269 aa20.31■□□□□ 0.84
ZNF550-207ENST00000595560 MYH16Q9H6N6 1097 aa20.31■□□□□ 0.84
ZNF550-207ENST00000595560 SPINK5Q9NQ38 1064 aaPredicted RBP20.31■□□□□ 0.84
ZNF550-207ENST00000595560 SNED1Q8TER0 1413 aa20.3■□□□□ 0.84
ZNF550-207ENST00000595560 ATP5J2-PTCD1G3V325 749 aa20.3■□□□□ 0.84
ZNF550-207ENST00000595560 C1QTNF8P60827 252 aa20.29■□□□□ 0.84
ZNF550-207ENST00000595560 SYNE4Q8N205 404 aa20.29■□□□□ 0.84
ZNF550-207ENST00000595560 KDM2BQ8NHM5 1336 aa20.28■□□□□ 0.84
ZNF550-207ENST00000595560 HCLS1P14317 486 aaPredicted RBP20.28■□□□□ 0.84
ZNF550-207ENST00000595560 EXOSC9Q06265 439 aaKnown RBP20.28■□□□□ 0.84
ZNF550-207ENST00000595560 RTKN2Q8IZC4 609 aa20.28■□□□□ 0.84
ZNF550-207ENST00000595560 TCERG1O14776 1098 aaKnown RBP20.27■□□□□ 0.84
ZNF550-207ENST00000595560 KIF3CO14782 793 aa20.27■□□□□ 0.84
ZNF550-207ENST00000595560 VAMP4O75379 141 aa20.27■□□□□ 0.84
ZNF550-207ENST00000595560 SLC4A2P04920 1241 aa20.27■□□□□ 0.84
ZNF550-207ENST00000595560 FKBP4Q02790 459 aaKnown RBP eCLIP20.27■□□□□ 0.84
ZNF550-207ENST00000595560 CC2D2BQ6DHV5 1058 aa20.27■□□□□ 0.84
ZNF550-207ENST00000595560 OLFM4Q6UX06 510 aa20.27■□□□□ 0.84
ZNF550-207ENST00000595560 METTL22Q9BUU2 404 aaPredicted RBP20.27■□□□□ 0.84
ZNF550-207ENST00000595560 KSR2Q6VAB6 950 aa20.26■□□□□ 0.83
ZNF550-207ENST00000595560 CCDC191Q8NCU4 936 aa20.26■□□□□ 0.83
ZNF550-207ENST00000595560 FAM89AQ96GI7 184 aa20.26■□□□□ 0.83
ZNF550-207ENST00000595560 MYD88Q99836 296 aa20.26■□□□□ 0.83
ZNF550-207ENST00000595560 MAP3K2Q9Y2U5 619 aa20.26■□□□□ 0.83
ZNF550-207ENST00000595560 TAF1P21675 1872 aa20.26■□□□□ 0.83
ZNF550-207ENST00000595560 PI4KAP2A4QPH2 592 aa20.25■□□□□ 0.83
ZNF550-207ENST00000595560 PPEF1O14829 653 aaPredicted RBP20.25■□□□□ 0.83
ZNF550-207ENST00000595560 GRIPAP1Q4V328 841 aa20.25■□□□□ 0.83
ZNF550-207ENST00000595560 PI4KAP1Q8N8J0 262 aa20.25■□□□□ 0.83
ZNF550-207ENST00000595560 ZNF428Q96B54 188 aa20.25■□□□□ 0.83
ZNF550-207ENST00000595560 NMRK2Q9NPI5 230 aa20.25■□□□□ 0.83
ZNF550-207ENST00000595560 ABCC4O15439 1325 aa20.25■□□□□ 0.83
ZNF550-207ENST00000595560 G2E3Q7L622 706 aa20.24■□□□□ 0.83
ZNF550-207ENST00000595560 ZBTB38Q8NAP3 1195 aaPredicted RBP20.24■□□□□ 0.83
ZNF550-207ENST00000595560 PSMD1Q99460 953 aa20.24■□□□□ 0.83
ZNF550-207ENST00000595560 LRRC37AA6NMS7 1700 aa20.24■□□□□ 0.83
ZNF550-207ENST00000595560 GLTPD2A6NH11 291 aa20.23■□□□□ 0.83
ZNF550-207ENST00000595560 FLIIQ13045 1269 aa20.23■□□□□ 0.83
ZNF550-207ENST00000595560 CWC25Q9NXE8 425 aaPredicted RBP20.23■□□□□ 0.83
ZNF550-207ENST00000595560 WDR90Q96KV7 1748 aa20.22■□□□□ 0.83
ZNF550-207ENST00000595560 IRS4O14654 1257 aaPredicted RBP20.22■□□□□ 0.83
ZNF550-207ENST00000595560 PCCAP05165 728 aaPredicted RBP20.22■□□□□ 0.83
ZNF550-207ENST00000595560 SF3B3Q15393 1217 aaKnown RBP20.22■□□□□ 0.83
ZNF550-207ENST00000595560 DDX46Q7L014 1031 aaKnown RBP20.22■□□□□ 0.83
ZNF550-207ENST00000595560 ATP6V0A2Q9Y487 856 aa20.22■□□□□ 0.83
ZNF550-207ENST00000595560 MYH3P11055 1940 aa20.21■□□□□ 0.83
ZNF550-207ENST00000595560 BBOX1O75936 387 aa20.21■□□□□ 0.83
ZNF550-207ENST00000595560 IGKV5-2P06315 115 aa20.21■□□□□ 0.83
ZNF550-207ENST00000595560 HSP90B1P14625 803 aaKnown RBP20.21■□□□□ 0.83
ZNF550-207ENST00000595560 NEXNQ0ZGT2 675 aa20.21■□□□□ 0.83
ZNF550-207ENST00000595560 GRAPQ13588 217 aa20.21■□□□□ 0.83
ZNF550-207ENST00000595560 RTL5Q5HYW3 569 aaPredicted RBP20.21■□□□□ 0.83
ZNF550-207ENST00000595560 GRAPLQ8TC17 118 aaPredicted RBP20.21■□□□□ 0.83
ZNF550-207ENST00000595560 ZNF277Q9NRM2 450 aaPredicted RBP20.21■□□□□ 0.83
ZNF550-207ENST00000595560 E9PSI1 815 aa20.2■□□□□ 0.82
ZNF550-207ENST00000595560 DPY19L2Q6NUT2 758 aa20.2■□□□□ 0.82
ZNF550-207ENST00000595560 IARSP41252 1262 aaKnown RBP20.19■□□□□ 0.82
ZNF550-207ENST00000595560 FKBP5Q13451 457 aaPredicted RBP20.19■□□□□ 0.82
ZNF550-207ENST00000595560 DIEXFQ68CQ4 756 aaKnown RBP20.19■□□□□ 0.82
ZNF550-207ENST00000595560 TMC4Q7Z404 712 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms