RNA–Protein interactions for RNA: ENST00000595158.5

UBA52-204, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, human

APPRIS P1 TSL 3 BASIC

Gene UBA52, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA52-204	ENST00000595158	NLRP10	Q86W26	655 aa		32.71	■■■□□ 2.83
UBA52-204	ENST00000595158	TSR2	Q969E8	191 aa	Known RBP	32.71	■■■□□ 2.83
UBA52-204	ENST00000595158	RNF123	Q5XPI4	1314 aa		32.71	■■■□□ 2.83
UBA52-204	ENST00000595158	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.71	■■■□□ 2.83
UBA52-204	ENST00000595158	ANKRD13D	Q6ZTN6	518 aa		32.7	■■■□□ 2.83
UBA52-204	ENST00000595158	TSPYL6	Q8N831	410 aa		32.7	■■■□□ 2.83
UBA52-204	ENST00000595158	UTP14A	Q9BVJ6	771 aa	Known RBP	32.7	■■■□□ 2.83
UBA52-204	ENST00000595158	KIF3C	O14782	793 aa		32.69	■■■□□ 2.82
UBA52-204	ENST00000595158	SOGA3	Q5TF21	947 aa		32.69	■■■□□ 2.82
UBA52-204	ENST00000595158	TIAM2	Q8IVF5	1701 aa		32.68	■■■□□ 2.82
UBA52-204	ENST00000595158	HOXA10	P31260	410 aa	Predicted RBP	32.68	■■■□□ 2.82
UBA52-204	ENST00000595158	SLC10A5	Q5PT55	438 aa		32.68	■■■□□ 2.82
UBA52-204	ENST00000595158	ALDH1B1	P30837	517 aa		32.67	■■■□□ 2.82
UBA52-204	ENST00000595158	CCDC88A	Q3V6T2	1871 aa		32.67	■■■□□ 2.82
UBA52-204	ENST00000595158	C3orf67	Q6ZVT6	689 aa		32.66	■■■□□ 2.82
UBA52-204	ENST00000595158	FAM9B	Q8IZU0	186 aa		32.66	■■■□□ 2.82
UBA52-204	ENST00000595158	ISCA1	Q9BUE6	129 aa		32.65	■■■□□ 2.82
UBA52-204	ENST00000595158	TAOK3	Q9H2K8	898 aa		32.65	■■■□□ 2.82
UBA52-204	ENST00000595158	CCDC93	Q567U6	631 aa		32.64	■■■□□ 2.82
UBA52-204	ENST00000595158	WDR63	Q8IWG1	891 aa		32.64	■■■□□ 2.82
UBA52-204	ENST00000595158	SNED1	Q8TER0	1413 aa		32.64	■■■□□ 2.82
UBA52-204	ENST00000595158	CHMP4A	Q9BY43	222 aa		32.64	■■■□□ 2.82
UBA52-204	ENST00000595158	PHAX	Q9H814	394 aa	Known RBP	32.64	■■■□□ 2.82
UBA52-204	ENST00000595158	CCDC30	Q5VVM6	783 aa		32.63	■■■□□ 2.81
UBA52-204	ENST00000595158	NMRK2	Q9NPI5	230 aa		32.63	■■■□□ 2.81
UBA52-204	ENST00000595158	DICER1	Q9UPY3	1922 aa	Known RBP	32.63	■■■□□ 2.81
UBA52-204	ENST00000595158	RPGR	Q92834	1020 aa	Known RBP	32.62	■■■□□ 2.81
UBA52-204	ENST00000595158	FANCI	Q9NVI1	1328 aa		32.61	■■■□□ 2.81
UBA52-204	ENST00000595158	OLFM4	Q6UX06	510 aa		32.61	■■■□□ 2.81
UBA52-204	ENST00000595158	CRAMP1	Q96RY5	1269 aa		32.61	■■■□□ 2.81
UBA52-204	ENST00000595158	LAMB2	P55268	1798 aa		32.6	■■■□□ 2.81
UBA52-204	ENST00000595158	KDM2B	Q8NHM5	1336 aa		32.6	■■■□□ 2.81
UBA52-204	ENST00000595158	SH3TC1	Q8TE82	1336 aa		32.6	■■■□□ 2.81
UBA52-204	ENST00000595158	SYNE4	Q8N205	404 aa		32.6	■■■□□ 2.81
UBA52-204	ENST00000595158	NLRP3	Q96P20	1036 aa		32.6	■■■□□ 2.81
UBA52-204	ENST00000595158	TRMT112	Q9UI30	125 aa	Known RBP	32.6	■■■□□ 2.81
UBA52-204	ENST00000595158	SALL2	Q9Y467	1007 aa	Predicted RBP	32.6	■■■□□ 2.81
UBA52-204	ENST00000595158	TRIM28	Q13263	835 aa	Known RBP	32.59	■■■□□ 2.81
UBA52-204	ENST00000595158	GOLGA2	Q08379	1002 aa		32.58	■■■□□ 2.81
UBA52-204	ENST00000595158	TWISTNB	Q3B726	338 aa	Predicted RBP	32.58	■■■□□ 2.81
UBA52-204	ENST00000595158	ATP5J2-PTCD1	G3V325	749 aa		32.57	■■■□□ 2.8
UBA52-204	ENST00000595158	RBM17	Q96I25	401 aa	Known RBP	32.57	■■■□□ 2.8
UBA52-204	ENST00000595158	DDX60	Q8IY21	1712 aa	Known RBP	32.57	■■■□□ 2.8
UBA52-204	ENST00000595158	HCLS1	P14317	486 aa	Predicted RBP	32.56	■■■□□ 2.8
UBA52-204	ENST00000595158	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.56	■■■□□ 2.8
UBA52-204	ENST00000595158	RIC3	Q7Z5B4	369 aa		32.56	■■■□□ 2.8
UBA52-204	ENST00000595158	RTKN2	Q8IZC4	609 aa		32.56	■■■□□ 2.8
UBA52-204	ENST00000595158	GLTPD2	A6NH11	291 aa		32.55	■■■□□ 2.8
UBA52-204	ENST00000595158	CC2D2B	Q6DHV5	1058 aa		32.54	■■■□□ 2.8
UBA52-204	ENST00000595158	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.54	■■■□□ 2.8
UBA52-204	ENST00000595158	ZNF428	Q96B54	188 aa		32.52	■■■□□ 2.8
UBA52-204	ENST00000595158	ABCC4	O15439	1325 aa		32.51	■■■□□ 2.8
UBA52-204	ENST00000595158	ZNF521	Q96K83	1311 aa		32.51	■■■□□ 2.8
UBA52-204	ENST00000595158	PSMD1	Q99460	953 aa		32.51	■■■□□ 2.79
UBA52-204	ENST00000595158	STK31	Q9BXU1	1019 aa		32.51	■■■□□ 2.79
UBA52-204	ENST00000595158	PPEF1	O14829	653 aa	Predicted RBP	32.5	■■■□□ 2.79
UBA52-204	ENST00000595158	TOMM70	O94826	608 aa		32.5	■■■□□ 2.79
UBA52-204	ENST00000595158	DDX58	O95786	925 aa	Known RBP	32.5	■■■□□ 2.79
UBA52-204	ENST00000595158	SLC51A	Q86UW1	340 aa		32.5	■■■□□ 2.79
UBA52-204	ENST00000595158	FAM89A	Q96GI7	184 aa		32.5	■■■□□ 2.79
UBA52-204	ENST00000595158	TCERG1	O14776	1098 aa	Known RBP	32.49	■■■□□ 2.79
UBA52-204	ENST00000595158	METTL22	Q9BUU2	404 aa	Predicted RBP	32.49	■■■□□ 2.79
UBA52-204	ENST00000595158	RRAGC	Q9HB90	399 aa		32.49	■■■□□ 2.79
UBA52-204	ENST00000595158	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.49	■■■□□ 2.79
UBA52-204	ENST00000595158	WDR90	Q96KV7	1748 aa		32.48	■■■□□ 2.79
UBA52-204	ENST00000595158	MYD88	Q99836	296 aa		32.48	■■■□□ 2.79
UBA52-204	ENST00000595158	VAMP4	O75379	141 aa		32.47	■■■□□ 2.79
UBA52-204	ENST00000595158	EXOSC9	Q06265	439 aa	Known RBP	32.47	■■■□□ 2.79
UBA52-204	ENST00000595158	GRIPAP1	Q4V328	841 aa		32.47	■■■□□ 2.79
UBA52-204	ENST00000595158	KSR2	Q6VAB6	950 aa		32.46	■■■□□ 2.79
UBA52-204	ENST00000595158	G2E3	Q7L622	706 aa		32.46	■■■□□ 2.79
UBA52-204	ENST00000595158	CCDC191	Q8NCU4	936 aa		32.46	■■■□□ 2.79
UBA52-204	ENST00000595158	MAP3K2	Q9Y2U5	619 aa		32.46	■■■□□ 2.79
UBA52-204	ENST00000595158	ATP6V0A2	Q9Y487	856 aa		32.46	■■■□□ 2.79
UBA52-204	ENST00000595158	SLC4A2	P04920	1241 aa		32.45	■■■□□ 2.79
UBA52-204	ENST00000595158	SF3B3	Q15393	1217 aa	Known RBP	32.45	■■■□□ 2.79
UBA52-204	ENST00000595158	DPY19L2	Q6NUT2	758 aa		32.45	■■■□□ 2.79
UBA52-204	ENST00000595158	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.45	■■■□□ 2.79
UBA52-204	ENST00000595158	PI4KAP2	A4QPH2	592 aa		32.44	■■■□□ 2.78
UBA52-204	ENST00000595158	IARS	P41252	1262 aa	Known RBP	32.44	■■■□□ 2.78
UBA52-204	ENST00000595158	PI4KAP1	Q8N8J0	262 aa		32.44	■■■□□ 2.78
UBA52-204	ENST00000595158	MYH16	Q9H6N6	1097 aa		32.44	■■■□□ 2.78
UBA52-204	ENST00000595158	POTEC	B2RU33	542 aa		32.43	■■■□□ 2.78
UBA52-204	ENST00000595158	BBOX1	O75936	387 aa		32.43	■■■□□ 2.78
UBA52-204	ENST00000595158	DDX46	Q7L014	1031 aa	Known RBP	32.43	■■■□□ 2.78
UBA52-204	ENST00000595158	RBM46	Q8TBY0	533 aa	Known RBP	32.43	■■■□□ 2.78
UBA52-204	ENST00000595158	IRS4	O14654	1257 aa	Predicted RBP	32.42	■■■□□ 2.78
UBA52-204	ENST00000595158	GRAP	Q13588	217 aa		32.42	■■■□□ 2.78
UBA52-204	ENST00000595158	RTL5	Q5HYW3	569 aa	Predicted RBP	32.42	■■■□□ 2.78
UBA52-204	ENST00000595158	GRAPL	Q8TC17	118 aa	Predicted RBP	32.42	■■■□□ 2.78
UBA52-204	ENST00000595158	COL4A5	P29400	1685 aa		32.42	■■■□□ 2.78
UBA52-204	ENST00000595158	CCER2	I3L3R5	266 aa		32.41	■■■□□ 2.78
UBA52-204	ENST00000595158	PCCA	P05165	728 aa	Predicted RBP	32.41	■■■□□ 2.78
UBA52-204	ENST00000595158	IGKV5-2	P06315	115 aa		32.41	■■■□□ 2.78
UBA52-204	ENST00000595158	VEGFA	P15692	232 aa	Predicted RBP	32.41	■■■□□ 2.78
UBA52-204	ENST00000595158	CWC25	Q9NXE8	425 aa	Predicted RBP	32.41	■■■□□ 2.78
UBA52-204	ENST00000595158	LRRC37A	A6NMS7	1700 aa		32.4	■■■□□ 2.78
UBA52-204	ENST00000595158	TAF1	P21675	1872 aa		32.4	■■■□□ 2.78
UBA52-204	ENST00000595158	CACNA1F	O60840	1977 aa		32.4	■■■□□ 2.78
UBA52-204	ENST00000595158	COL4A1	P02462	1669 aa		32.4	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms