RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 C3orf67Q6ZVT6 689 aa19.06■□□□□ 0.64
USE1-205ENST00000594724 WDR63Q8IWG1 891 aa19.06■□□□□ 0.64
USE1-205ENST00000594724 SYNE4Q8N205 404 aa19.06■□□□□ 0.64
USE1-205ENST00000594724 ATP5J2-PTCD1G3V325 749 aa19.05■□□□□ 0.64
USE1-205ENST00000594724 TCERG1O14776 1098 aaKnown RBP19.05■□□□□ 0.64
USE1-205ENST00000594724 ALDH1B1P30837 517 aa19.05■□□□□ 0.64
USE1-205ENST00000594724 C1QTNF8P60827 252 aa19.05■□□□□ 0.64
USE1-205ENST00000594724 CRY2Q49AN0 593 aa19.05■□□□□ 0.64
USE1-205ENST00000594724 OLFM4Q6UX06 510 aa19.05■□□□□ 0.64
USE1-205ENST00000594724 C7orf43Q8WVR3 580 aa19.05■□□□□ 0.64
USE1-205ENST00000594724 TRMT112Q9UI30 125 aaKnown RBP19.05■□□□□ 0.64
USE1-205ENST00000594724 SBF1O95248 1867 aa19.05■□□□□ 0.64
USE1-205ENST00000594724 CACNA1SQ13698 1873 aa19.04■□□□□ 0.64
USE1-205ENST00000594724 TWISTNBQ3B726 338 aaPredicted RBP19.04■□□□□ 0.64
USE1-205ENST00000594724 SLC10A5Q5PT55 438 aa19.04■□□□□ 0.64
USE1-205ENST00000594724 RIC3Q7Z5B4 369 aa19.04■□□□□ 0.64
USE1-205ENST00000594724 RPGRQ92834 1020 aaKnown RBP19.04■□□□□ 0.64
USE1-205ENST00000594724 FANCIQ9NVI1 1328 aa19.03■□□□□ 0.64
USE1-205ENST00000594724 HCLS1P14317 486 aaPredicted RBP19.03■□□□□ 0.64
USE1-205ENST00000594724 NLRP3Q96P20 1036 aa19.03■□□□□ 0.64
USE1-205ENST00000594724 ISCA1Q9BUE6 129 aa19.03■□□□□ 0.64
USE1-205ENST00000594724 SPINK5Q9NQ38 1064 aaPredicted RBP19.03■□□□□ 0.64
USE1-205ENST00000594724 RIC1Q4ADV7 1423 aa19.02■□□□□ 0.64
USE1-205ENST00000594724 GOLGA2Q08379 1002 aa19.02■□□□□ 0.64
USE1-205ENST00000594724 SOGA3Q5TF21 947 aa19.02■□□□□ 0.64
USE1-205ENST00000594724 CHMP4AQ9BY43 222 aa19.02■□□□□ 0.64
USE1-205ENST00000594724 TAOK3Q9H2K8 898 aa19.02■□□□□ 0.64
USE1-205ENST00000594724 NMRK2Q9NPI5 230 aa19.02■□□□□ 0.64
USE1-205ENST00000594724 ANKRD36CQ5JPF3 1778 aa19.01■□□□□ 0.63
USE1-205ENST00000594724 KIF3CO14782 793 aa19.01■□□□□ 0.63
USE1-205ENST00000594724 HOXA10P31260 410 aaPredicted RBP19.01■□□□□ 0.63
USE1-205ENST00000594724 CCDC93Q567U6 631 aa19.01■□□□□ 0.63
USE1-205ENST00000594724 RBM17Q96I25 401 aaKnown RBP19.01■□□□□ 0.63
USE1-205ENST00000594724 ARFGEF2Q9Y6D5 1785 aa19.01■□□□□ 0.63
USE1-205ENST00000594724 SH3TC1Q8TE82 1336 aa19■□□□□ 0.63
USE1-205ENST00000594724 EXOSC9Q06265 439 aaKnown RBP19■□□□□ 0.63
USE1-205ENST00000594724 MYD88Q99836 296 aa19■□□□□ 0.63
USE1-205ENST00000594724 STK31Q9BXU1 1019 aa19■□□□□ 0.63
USE1-205ENST00000594724 RNF123Q5XPI4 1314 aa19■□□□□ 0.63
USE1-205ENST00000594724 LTBP3Q9NS15 1303 aa19■□□□□ 0.63
USE1-205ENST00000594724 FER1L6Q2WGJ9 1857 aa18.99■□□□□ 0.63
USE1-205ENST00000594724 RTL5Q5HYW3 569 aaPredicted RBP18.99■□□□□ 0.63
USE1-205ENST00000594724 FAM89AQ96GI7 184 aa18.99■□□□□ 0.63
USE1-205ENST00000594724 CRAMP1Q96RY5 1269 aa18.99■□□□□ 0.63
USE1-205ENST00000594724 CCDC88AQ3V6T2 1871 aa18.99■□□□□ 0.63
USE1-205ENST00000594724 SLC4A2P04920 1241 aa18.98■□□□□ 0.63
USE1-205ENST00000594724 TRIM28Q13263 835 aaKnown RBP18.98■□□□□ 0.63
USE1-205ENST00000594724 G2E3Q7L622 706 aa18.98■□□□□ 0.63
USE1-205ENST00000594724 SLC51AQ86UW1 340 aa18.98■□□□□ 0.63
USE1-205ENST00000594724 VAMP4O75379 141 aa18.97■□□□□ 0.63
USE1-205ENST00000594724 DDX58O95786 925 aaKnown RBP18.97■□□□□ 0.63
USE1-205ENST00000594724 FKBP4Q02790 459 aaKnown RBP eCLIP18.97■□□□□ 0.63
USE1-205ENST00000594724 RTKN2Q8IZC4 609 aa18.97■□□□□ 0.63
USE1-205ENST00000594724 RRAGCQ9HB90 399 aa18.97■□□□□ 0.63
USE1-205ENST00000594724 MAP3K2Q9Y2U5 619 aa18.97■□□□□ 0.63
USE1-205ENST00000594724 KDM2BQ8NHM5 1336 aa18.97■□□□□ 0.63
USE1-205ENST00000594724 ZC3H4Q9UPT8 1303 aaKnown RBP18.97■□□□□ 0.63
USE1-205ENST00000594724 PI4KAP2A4QPH2 592 aa18.96■□□□□ 0.63
USE1-205ENST00000594724 PPEF1O14829 653 aaPredicted RBP18.96■□□□□ 0.63
USE1-205ENST00000594724 PI4KAP1Q8N8J0 262 aa18.96■□□□□ 0.63
USE1-205ENST00000594724 METTL22Q9BUU2 404 aaPredicted RBP18.96■□□□□ 0.63
USE1-205ENST00000594724 ZNF277Q9NRM2 450 aaPredicted RBP18.96■□□□□ 0.63
USE1-205ENST00000594724 GLTPD2A6NH11 291 aa18.95■□□□□ 0.62
USE1-205ENST00000594724 KSR2Q6VAB6 950 aa18.95■□□□□ 0.62
USE1-205ENST00000594724 ABCC4O15439 1325 aa18.95■□□□□ 0.62
USE1-205ENST00000594724 JARID2Q92833 1246 aaPredicted RBP18.94■□□□□ 0.62
USE1-205ENST00000594724 MYH16Q9H6N6 1097 aa18.94■□□□□ 0.62
USE1-205ENST00000594724 ZNF521Q96K83 1311 aa18.94■□□□□ 0.62
USE1-205ENST00000594724 CCER2I3L3R5 266 aa18.93■□□□□ 0.62
USE1-205ENST00000594724 IRS4O14654 1257 aaPredicted RBP18.93■□□□□ 0.62
USE1-205ENST00000594724 CC2D2BQ6DHV5 1058 aa18.93■□□□□ 0.62
USE1-205ENST00000594724 DDX46Q7L014 1031 aaKnown RBP18.93■□□□□ 0.62
USE1-205ENST00000594724 ZBTB38Q8NAP3 1195 aaPredicted RBP18.93■□□□□ 0.62
USE1-205ENST00000594724 CCDC191Q8NCU4 936 aa18.93■□□□□ 0.62
USE1-205ENST00000594724 TIAM2Q8IVF5 1701 aa18.92■□□□□ 0.62
USE1-205ENST00000594724 LAMB2P55268 1798 aa18.92■□□□□ 0.62
USE1-205ENST00000594724 DPY19L2Q6NUT2 758 aa18.92■□□□□ 0.62
USE1-205ENST00000594724 CWC25Q9NXE8 425 aaPredicted RBP18.92■□□□□ 0.62
USE1-205ENST00000594724 SNED1Q8TER0 1413 aa18.91■□□□□ 0.62
USE1-205ENST00000594724 BBOX1O75936 387 aa18.91■□□□□ 0.62
USE1-205ENST00000594724 TOMM70O94826 608 aa18.91■□□□□ 0.62
USE1-205ENST00000594724 IGKV5-2P06315 115 aa18.91■□□□□ 0.62
USE1-205ENST00000594724 IARSP41252 1262 aaKnown RBP18.91■□□□□ 0.62
USE1-205ENST00000594724 FLIIQ13045 1269 aa18.91■□□□□ 0.62
USE1-205ENST00000594724 SF3B3Q15393 1217 aaKnown RBP18.91■□□□□ 0.62
USE1-205ENST00000594724 PSMD1Q99460 953 aa18.91■□□□□ 0.62
USE1-205ENST00000594724 ATP6V0A2Q9Y487 856 aa18.91■□□□□ 0.62
USE1-205ENST00000594724 DICER1Q9UPY3 1922 aaKnown RBP18.9■□□□□ 0.62
USE1-205ENST00000594724 DDNO94850 711 aaPredicted RBP18.9■□□□□ 0.62
USE1-205ENST00000594724 PCCAP05165 728 aaPredicted RBP18.9■□□□□ 0.62
USE1-205ENST00000594724 GRAPQ13588 217 aa18.9■□□□□ 0.62
USE1-205ENST00000594724 C16orf71Q8IYS4 520 aaPredicted RBP18.9■□□□□ 0.62
USE1-205ENST00000594724 GRAPLQ8TC17 118 aaPredicted RBP18.9■□□□□ 0.62
USE1-205ENST00000594724 DDX60Q8IY21 1712 aaKnown RBP18.9■□□□□ 0.62
USE1-205ENST00000594724 NEXNQ0ZGT2 675 aa18.89■□□□□ 0.61
USE1-205ENST00000594724 FKBP5Q13451 457 aaPredicted RBP18.89■□□□□ 0.61
USE1-205ENST00000594724 CWF19L2Q2TBE0 894 aaKnown RBP18.89■□□□□ 0.61
USE1-205ENST00000594724 TMX4Q9H1E5 349 aaPredicted RBP18.89■□□□□ 0.61
USE1-205ENST00000594724 POTECB2RU33 542 aa18.88■□□□□ 0.61
USE1-205ENST00000594724 VEGFAP15692 232 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms