RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 FYB1O15117 783 aa13.38□□□□□ -0.27
TUBD1-215ENST00000593110 HSPA1AP0DMV8 641 aaKnown RBP13.38□□□□□ -0.27
TUBD1-215ENST00000593110 HSPA1BP0DMV9 641 aaKnown RBP13.38□□□□□ -0.27
TUBD1-215ENST00000593110 GYS1P13807 737 aa13.38□□□□□ -0.27
TUBD1-215ENST00000593110 C16orf71Q8IYS4 520 aaPredicted RBP13.37□□□□□ -0.27
TUBD1-215ENST00000593110 GGNBP2Q9H3C7 697 aa13.37□□□□□ -0.27
TUBD1-215ENST00000593110 ATG3Q9NT62 314 aa13.37□□□□□ -0.27
TUBD1-215ENST00000593110 FAM198AQ9UFP1 575 aa13.37□□□□□ -0.27
TUBD1-215ENST00000593110 ADAMTS7Q9UKP4 1686 aa13.37□□□□□ -0.27
TUBD1-215ENST00000593110 TONSLQ96HA7 1378 aa13.36□□□□□ -0.27
TUBD1-215ENST00000593110 GOLGA8CPA6NN73 597 aa13.36□□□□□ -0.27
TUBD1-215ENST00000593110 ATP6V1AP38606 617 aa13.36□□□□□ -0.27
TUBD1-215ENST00000593110 TMF1P82094 1093 aa13.36□□□□□ -0.27
TUBD1-215ENST00000593110 NLGN1Q8N2Q7 840 aa13.36□□□□□ -0.27
TUBD1-215ENST00000593110 TTC13Q8NBP0 860 aa13.36□□□□□ -0.27
TUBD1-215ENST00000593110 CCDC87Q9NVE4 849 aa13.36□□□□□ -0.27
TUBD1-215ENST00000593110 SEPT9Q9UHD8 586 aaPredicted RBP13.36□□□□□ -0.27
TUBD1-215ENST00000593110 PNMA3Q9UL41 463 aa13.36□□□□□ -0.27
TUBD1-215ENST00000593110 KDM2BQ8NHM5 1336 aa13.36□□□□□ -0.27
TUBD1-215ENST00000593110 SMC1BQ8NDV3 1235 aa13.35□□□□□ -0.27
TUBD1-215ENST00000593110 RRAGCQ9HB90 399 aa13.35□□□□□ -0.27
TUBD1-215ENST00000593110 TMOD3Q9NYL9 352 aa13.35□□□□□ -0.27
TUBD1-215ENST00000593110 RNF181Q9P0P0 153 aa13.35□□□□□ -0.27
TUBD1-215ENST00000593110 TIAM2Q8IVF5 1701 aa13.35□□□□□ -0.27
TUBD1-215ENST00000593110 CNTNAP4Q9C0A0 1308 aa13.35□□□□□ -0.27
TUBD1-215ENST00000593110 LAPTM4BQ86VI4 370 aa13.34□□□□□ -0.27
TUBD1-215ENST00000593110 TATDN2Q93075 761 aa13.34□□□□□ -0.27
TUBD1-215ENST00000593110 TRAPPC3LQ5T215 181 aa13.33□□□□□ -0.28
TUBD1-215ENST00000593110 NUDT18Q6ZVK8 323 aa13.33□□□□□ -0.28
TUBD1-215ENST00000593110 RTCBQ9Y3I0 505 aaKnown RBP13.33□□□□□ -0.28
TUBD1-215ENST00000593110 EMILIN1Q9Y6C2 1016 aa13.33□□□□□ -0.28
TUBD1-215ENST00000593110 ZC3H4Q9UPT8 1303 aaKnown RBP13.33□□□□□ -0.28
TUBD1-215ENST00000593110 DLEC1Q9Y238 1755 aa13.32□□□□□ -0.28
TUBD1-215ENST00000593110 SMAPO00193 183 aa13.32□□□□□ -0.28
TUBD1-215ENST00000593110 PHKG2P15735 406 aa13.32□□□□□ -0.28
TUBD1-215ENST00000593110 ZEB1P37275 1124 aaPredicted RBP13.32□□□□□ -0.28
TUBD1-215ENST00000593110 DDR1Q08345 913 aa13.32□□□□□ -0.28
TUBD1-215ENST00000593110 MMRN1Q13201 1228 aa13.32□□□□□ -0.28
TUBD1-215ENST00000593110 NEUROD1Q13562 356 aa13.32□□□□□ -0.28
TUBD1-215ENST00000593110 RC3H1Q5TC82 1133 aaKnown RBP13.32□□□□□ -0.28
TUBD1-215ENST00000593110 PIM2Q9P1W9 311 aa13.32□□□□□ -0.28
TUBD1-215ENST00000593110 TJP1Q07157 1748 aa13.32□□□□□ -0.28
TUBD1-215ENST00000593110 RNF166Q96A37 237 aaPredicted RBP13.31□□□□□ -0.28
TUBD1-215ENST00000593110 PLSCR2Q9NRY7 297 aa13.31□□□□□ -0.28
TUBD1-215ENST00000593110 SPG7Q9UQ90 795 aa13.31□□□□□ -0.28
TUBD1-215ENST00000593110 PARP3Q9Y6F1 533 aa13.31□□□□□ -0.28
TUBD1-215ENST00000593110 NRXN2Q9P2S2 1712 aa13.3□□□□□ -0.28
TUBD1-215ENST00000593110 RPS6KA4O75676 772 aa13.3□□□□□ -0.28
TUBD1-215ENST00000593110 FECHP22830 423 aa13.3□□□□□ -0.28
TUBD1-215ENST00000593110 RASSF7Q02833 373 aa13.3□□□□□ -0.28
TUBD1-215ENST00000593110 DALRD3Q5D0E6 543 aaKnown RBP13.3□□□□□ -0.28
TUBD1-215ENST00000593110 ST20-MTHFSA0A0A6YYL1 179 aa13.29□□□□□ -0.28
TUBD1-215ENST00000593110 CHRNA5P30532 468 aa13.29□□□□□ -0.28
TUBD1-215ENST00000593110 IFNL2Q8IZJ0 200 aa13.29□□□□□ -0.28
TUBD1-215ENST00000593110 ZC3H15Q8WU90 426 aaKnown RBP13.29□□□□□ -0.28
TUBD1-215ENST00000593110 EYA1Q99502 592 aa13.29□□□□□ -0.28
TUBD1-215ENST00000593110 USP42Q9H9J4 1324 aaKnown RBP13.29□□□□□ -0.28
TUBD1-215ENST00000593110 AFDNP55196 1824 aaKnown RBP13.28□□□□□ -0.28
TUBD1-215ENST00000593110 POTECB2RU33 542 aa13.28□□□□□ -0.28
TUBD1-215ENST00000593110 SRP68Q9UHB9 627 aaKnown RBP13.28□□□□□ -0.28
TUBD1-215ENST00000593110 ADGRG1Q9Y653 693 aa13.28□□□□□ -0.28
TUBD1-215ENST00000593110 GLTPD2A6NH11 291 aa13.27□□□□□ -0.29
TUBD1-215ENST00000593110 C3orf80F5H4A9 247 aa13.27□□□□□ -0.29
TUBD1-215ENST00000593110 POLRMTO00411 1230 aaKnown RBP13.27□□□□□ -0.29
TUBD1-215ENST00000593110 RFC4P35249 363 aa13.27□□□□□ -0.29
TUBD1-215ENST00000593110 KCTD12Q96CX2 325 aaKnown RBP13.27□□□□□ -0.29
TUBD1-215ENST00000593110 WASHC2AQ641Q2 1341 aa13.27□□□□□ -0.29
TUBD1-215ENST00000593110 FAM161AQ3B820 660 aa13.26□□□□□ -0.29
TUBD1-215ENST00000593110 CCDC88AQ3V6T2 1871 aa13.26□□□□□ -0.29
TUBD1-215ENST00000593110 ANKK1Q8NFD2 765 aa13.26□□□□□ -0.29
TUBD1-215ENST00000593110 WNT2BQ93097 391 aa13.26□□□□□ -0.29
TUBD1-215ENST00000593110 ZFRQ96KR1 1074 aaKnown RBP13.26□□□□□ -0.29
TUBD1-215ENST00000593110 OATP04181 439 aa13.25□□□□□ -0.29
TUBD1-215ENST00000593110 VEGFAP15692 232 aaPredicted RBP13.25□□□□□ -0.29
TUBD1-215ENST00000593110 MAP2K5Q13163 448 aa13.25□□□□□ -0.29
TUBD1-215ENST00000593110 ERVV-2B6SEH9 535 aa13.24□□□□□ -0.29
TUBD1-215ENST00000593110 LMNB1P20700 586 aa13.24□□□□□ -0.29
TUBD1-215ENST00000593110 TM4SF1P30408 202 aa13.24□□□□□ -0.29
TUBD1-215ENST00000593110 CARD14Q9BXL6 1004 aa13.24□□□□□ -0.29
TUBD1-215ENST00000593110 DICER1Q9UPY3 1922 aaKnown RBP13.23□□□□□ -0.29
TUBD1-215ENST00000593110 NFKBIEO00221 500 aa13.23□□□□□ -0.29
TUBD1-215ENST00000593110 FOXN1O15353 648 aa13.23□□□□□ -0.29
TUBD1-215ENST00000593110 CRKLP46109 303 aaKnown RBP13.23□□□□□ -0.29
TUBD1-215ENST00000593110 KRI1Q8N9T8 703 aaKnown RBP13.23□□□□□ -0.29
TUBD1-215ENST00000593110 ZMYND10O75800 440 aa13.22□□□□□ -0.29
TUBD1-215ENST00000593110 VIRMAQ69YN4 1812 aaKnown RBP13.22□□□□□ -0.29
TUBD1-215ENST00000593110 CNTNAP1P78357 1384 aa13.21□□□□□ -0.29
TUBD1-215ENST00000593110 CARMIL3Q8ND23 1372 aa13.21□□□□□ -0.29
TUBD1-215ENST00000593110 FER1L6Q2WGJ9 1857 aa13.21□□□□□ -0.29
TUBD1-215ENST00000593110 EIF4A2Q14240 407 aaKnown RBP13.21□□□□□ -0.29
TUBD1-215ENST00000593110 PRDM10Q9NQV6 1147 aa13.21□□□□□ -0.29
TUBD1-215ENST00000593110 COL11A2P13942 1736 aaPredicted RBP13.21□□□□□ -0.3
TUBD1-215ENST00000593110 ANKRD31Q8N7Z5 1873 aa13.21□□□□□ -0.3
TUBD1-215ENST00000593110 INTS5Q6P9B9 1019 aaKnown RBP13.2□□□□□ -0.3
TUBD1-215ENST00000593110 LRCH3Q96II8 777 aa13.2□□□□□ -0.3
TUBD1-215ENST00000593110 POLKQ9UBT6 870 aa13.2□□□□□ -0.3
TUBD1-215ENST00000593110 SOS1Q07889 1333 aaPredicted RBP13.19□□□□□ -0.3
TUBD1-215ENST00000593110 DNAJB2P25686 324 aa13.19□□□□□ -0.3
TUBD1-215ENST00000593110 METTL3Q86U44 580 aaKnown RBP13.19□□□□□ -0.3
TUBD1-215ENST00000593110 PXYLP1Q8TE99 480 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms