RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 ARHGAP27Q6ZUM4 889 aa19.46■□□□□ 0.71
ERCC1-217ENST00000592905 UTP14AQ9BVJ6 771 aaKnown RBP19.46■□□□□ 0.71
ERCC1-217ENST00000592905 ZNF219Q9P2Y4 722 aaPredicted RBP19.46■□□□□ 0.71
ERCC1-217ENST00000592905 SYNE4Q8N205 404 aa19.45■□□□□ 0.7
ERCC1-217ENST00000592905 TTLL6Q8N841 843 aa19.45■□□□□ 0.7
ERCC1-217ENST00000592905 SLX4Q8IY92 1834 aa19.44■□□□□ 0.7
ERCC1-217ENST00000592905 E9PSI1 815 aa19.44■□□□□ 0.7
ERCC1-217ENST00000592905 SRGNP10124 158 aa19.44■□□□□ 0.7
ERCC1-217ENST00000592905 MYD88Q99836 296 aa19.44■□□□□ 0.7
ERCC1-217ENST00000592905 ISCA1Q9BUE6 129 aa19.44■□□□□ 0.7
ERCC1-217ENST00000592905 PDZRN3Q9UPQ7 1066 aa19.44■□□□□ 0.7
ERCC1-217ENST00000592905 DDX58O95786 925 aaKnown RBP19.43■□□□□ 0.7
ERCC1-217ENST00000592905 C3orf67Q6ZVT6 689 aa19.43■□□□□ 0.7
ERCC1-217ENST00000592905 MASTLQ96GX5 879 aa19.43■□□□□ 0.7
ERCC1-217ENST00000592905 TRMT112Q9UI30 125 aaKnown RBP19.43■□□□□ 0.7
ERCC1-217ENST00000592905 MAP3K2Q9Y2U5 619 aa19.43■□□□□ 0.7
ERCC1-217ENST00000592905 KLRG2A4D1S0 409 aaPredicted RBP19.42■□□□□ 0.7
ERCC1-217ENST00000592905 PI4KAP2A4QPH2 592 aa19.42■□□□□ 0.7
ERCC1-217ENST00000592905 RTL5Q5HYW3 569 aaPredicted RBP19.42■□□□□ 0.7
ERCC1-217ENST00000592905 PI4KAP1Q8N8J0 262 aa19.42■□□□□ 0.7
ERCC1-217ENST00000592905 IBTKQ9P2D0 1353 aaPredicted RBP19.42■□□□□ 0.7
ERCC1-217ENST00000592905 HCLS1P14317 486 aaPredicted RBP19.41■□□□□ 0.7
ERCC1-217ENST00000592905 NPR1P16066 1061 aa19.41■□□□□ 0.7
ERCC1-217ENST00000592905 STYK1Q6J9G0 422 aa19.41■□□□□ 0.7
ERCC1-217ENST00000592905 KSR2Q6VAB6 950 aa19.41■□□□□ 0.7
ERCC1-217ENST00000592905 LAMB2P55268 1798 aa19.4■□□□□ 0.7
ERCC1-217ENST00000592905 C21orf2O43822 256 aa19.4■□□□□ 0.7
ERCC1-217ENST00000592905 HNRNPUQ00839 825 aaKnown RBP eCLIP19.4■□□□□ 0.7
ERCC1-217ENST00000592905 FLIIQ13045 1269 aa19.4■□□□□ 0.7
ERCC1-217ENST00000592905 CNKSR1Q969H4 720 aa19.4■□□□□ 0.7
ERCC1-217ENST00000592905 FAM89AQ96GI7 184 aa19.4■□□□□ 0.7
ERCC1-217ENST00000592905 METTL22Q9BUU2 404 aaPredicted RBP19.4■□□□□ 0.7
ERCC1-217ENST00000592905 ADCY9O60503 1353 aa19.4■□□□□ 0.7
ERCC1-217ENST00000592905 CCDC88AQ3V6T2 1871 aa19.39■□□□□ 0.7
ERCC1-217ENST00000592905 FKBP5Q13451 457 aaPredicted RBP19.39■□□□□ 0.69
ERCC1-217ENST00000592905 SLC10A5Q5PT55 438 aa19.39■□□□□ 0.69
ERCC1-217ENST00000592905 PRPF40BQ6NWY9 871 aaKnown RBP19.39■□□□□ 0.69
ERCC1-217ENST00000592905 TRMT2AQ8IZ69 625 aaKnown RBP19.39■□□□□ 0.69
ERCC1-217ENST00000592905 JARID2Q92833 1246 aaPredicted RBP19.39■□□□□ 0.69
ERCC1-217ENST00000592905 SH3TC1Q8TE82 1336 aa19.39■□□□□ 0.69
ERCC1-217ENST00000592905 SBF1O95248 1867 aa19.38■□□□□ 0.69
ERCC1-217ENST00000592905 TAF1P21675 1872 aa19.38■□□□□ 0.69
ERCC1-217ENST00000592905 TRIM28Q13263 835 aaKnown RBP19.38■□□□□ 0.69
ERCC1-217ENST00000592905 DDX60Q8IY21 1712 aaKnown RBP19.38■□□□□ 0.69
ERCC1-217ENST00000592905 NLRP3Q96P20 1036 aa19.38■□□□□ 0.69
ERCC1-217ENST00000592905 RASSF7Q02833 373 aa19.37■□□□□ 0.69
ERCC1-217ENST00000592905 CRY2Q49AN0 593 aa19.37■□□□□ 0.69
ERCC1-217ENST00000592905 RPGRQ92834 1020 aaKnown RBP19.37■□□□□ 0.69
ERCC1-217ENST00000592905 IGKV5-2P06315 115 aa19.36■□□□□ 0.69
ERCC1-217ENST00000592905 OLFM4Q6UX06 510 aa19.36■□□□□ 0.69
ERCC1-217ENST00000592905 RIC1Q4ADV7 1423 aa19.35■□□□□ 0.69
ERCC1-217ENST00000592905 RNF123Q5XPI4 1314 aa19.35■□□□□ 0.69
ERCC1-217ENST00000592905 CWF19L2Q2TBE0 894 aaKnown RBP19.35■□□□□ 0.69
ERCC1-217ENST00000592905 CCDC191Q8NCU4 936 aa19.35■□□□□ 0.69
ERCC1-217ENST00000592905 CWC25Q9NXE8 425 aaPredicted RBP19.35■□□□□ 0.69
ERCC1-217ENST00000592905 F6X3S4 739 aa19.34■□□□□ 0.69
ERCC1-217ENST00000592905 ALDH1B1P30837 517 aa19.34■□□□□ 0.69
ERCC1-217ENST00000592905 NEXNQ0ZGT2 675 aa19.34■□□□□ 0.69
ERCC1-217ENST00000592905 DNAAF4Q8WXU2 420 aa19.34■□□□□ 0.69
ERCC1-217ENST00000592905 RBM17Q96I25 401 aaKnown RBP19.34■□□□□ 0.69
ERCC1-217ENST00000592905 BCL2L13Q9BXK5 485 aa19.34■□□□□ 0.69
ERCC1-217ENST00000592905 FER1L6Q2WGJ9 1857 aa19.34■□□□□ 0.69
ERCC1-217ENST00000592905 NFKBIEO00221 500 aa19.33■□□□□ 0.68
ERCC1-217ENST00000592905 IRS4O14654 1257 aaPredicted RBP19.33■□□□□ 0.68
ERCC1-217ENST00000592905 HOXA10P31260 410 aaPredicted RBP19.33■□□□□ 0.68
ERCC1-217ENST00000592905 C9orf131Q5VYM1 1079 aa19.33■□□□□ 0.68
ERCC1-217ENST00000592905 SLC51AQ86UW1 340 aa19.33■□□□□ 0.68
ERCC1-217ENST00000592905 MRPL50Q8N5N7 158 aaKnown RBP19.33■□□□□ 0.68
ERCC1-217ENST00000592905 ZBTB38Q8NAP3 1195 aaPredicted RBP19.33■□□□□ 0.68
ERCC1-217ENST00000592905 C7orf43Q8WVR3 580 aa19.33■□□□□ 0.68
ERCC1-217ENST00000592905 SSH1Q8WYL5 1049 aa19.33■□□□□ 0.68
ERCC1-217ENST00000592905 NEURL1BA8MQ27 555 aa19.32■□□□□ 0.68
ERCC1-217ENST00000592905 PRELPP51888 382 aa19.32■□□□□ 0.68
ERCC1-217ENST00000592905 ZNF784Q8NCA9 323 aaPredicted RBP19.32■□□□□ 0.68
ERCC1-217ENST00000592905 PCCAP05165 728 aaPredicted RBP19.31■□□□□ 0.68
ERCC1-217ENST00000592905 CRAMP1Q96RY5 1269 aa19.31■□□□□ 0.68
ERCC1-217ENST00000592905 RNF181Q9P0P0 153 aa19.31■□□□□ 0.68
ERCC1-217ENST00000592905 ZNF526Q8TF50 670 aaPredicted RBP19.3■□□□□ 0.68
ERCC1-217ENST00000592905 ABCC4O15439 1325 aa19.29■□□□□ 0.68
ERCC1-217ENST00000592905 PPEF1O14829 653 aaPredicted RBP19.28■□□□□ 0.68
ERCC1-217ENST00000592905 GCKRQ14397 625 aa19.28■□□□□ 0.68
ERCC1-217ENST00000592905 CCDC93Q567U6 631 aa19.28■□□□□ 0.68
ERCC1-217ENST00000592905 SLC4A10Q6U841 1118 aa19.28■□□□□ 0.68
ERCC1-217ENST00000592905 DDX46Q7L014 1031 aaKnown RBP19.28■□□□□ 0.68
ERCC1-217ENST00000592905 LINS1Q8NG48 757 aa19.28■□□□□ 0.68
ERCC1-217ENST00000592905 CCDC85AQ96PX6 553 aaPredicted RBP19.28■□□□□ 0.68
ERCC1-217ENST00000592905 SF3B3Q15393 1217 aaKnown RBP19.27■□□□□ 0.68
ERCC1-217ENST00000592905 BEND3Q5T5X7 828 aa19.27■□□□□ 0.68
ERCC1-217ENST00000592905 SOGA3Q5TF21 947 aa19.27■□□□□ 0.68
ERCC1-217ENST00000592905 SMC4Q9NTJ3 1288 aa19.27■□□□□ 0.68
ERCC1-217ENST00000592905 MYH3P11055 1940 aa19.26■□□□□ 0.67
ERCC1-217ENST00000592905 PDE8AO60658 829 aa19.26■□□□□ 0.67
ERCC1-217ENST00000592905 LMNB1P20700 586 aa19.26■□□□□ 0.67
ERCC1-217ENST00000592905 ALDH1L2Q3SY69 923 aa19.26■□□□□ 0.67
ERCC1-217ENST00000592905 UBE3BQ7Z3V4 1068 aa19.26■□□□□ 0.67
ERCC1-217ENST00000592905 TAOK3Q9H2K8 898 aa19.26■□□□□ 0.67
ERCC1-217ENST00000592905 COL4A1P02462 1669 aa19.26■□□□□ 0.67
ERCC1-217ENST00000592905 DICER1Q9UPY3 1922 aaKnown RBP19.25■□□□□ 0.67
ERCC1-217ENST00000592905 H7C1W4 665 aa19.25■□□□□ 0.67
ERCC1-217ENST00000592905 SEC31BQ9NQW1 1179 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms