RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 CCDC93Q567U6 631 aa19.33■□□□□ 0.68
SF3A2-207ENST00000592839 NGEFQ8N5V2 710 aa19.33■□□□□ 0.68
SF3A2-207ENST00000592839 XAGE3Q8WTP9 111 aa19.33■□□□□ 0.68
SF3A2-207ENST00000592839 CHMP4AQ9BY43 222 aa19.33■□□□□ 0.68
SF3A2-207ENST00000592839 NMRK2Q9NPI5 230 aa19.33■□□□□ 0.68
SF3A2-207ENST00000592839 HYPKQ9NX55 129 aa19.33■□□□□ 0.68
SF3A2-207ENST00000592839 CHPF2Q9P2E5 772 aa19.33■□□□□ 0.68
SF3A2-207ENST00000592839 GLTPD2A6NH11 291 aa19.32■□□□□ 0.68
SF3A2-207ENST00000592839 ANP32CO43423 234 aa19.32■□□□□ 0.68
SF3A2-207ENST00000592839 ANXA1P04083 346 aa19.32■□□□□ 0.68
SF3A2-207ENST00000592839 TRIM28Q13263 835 aaKnown RBP19.32■□□□□ 0.68
SF3A2-207ENST00000592839 TCIRG1Q13488 830 aa19.32■□□□□ 0.68
SF3A2-207ENST00000592839 GRIPAP1Q4V328 841 aa19.32■□□□□ 0.68
SF3A2-207ENST00000592839 CC2D2BQ6DHV5 1058 aa19.32■□□□□ 0.68
SF3A2-207ENST00000592839 C16orf71Q8IYS4 520 aaPredicted RBP19.32■□□□□ 0.68
SF3A2-207ENST00000592839 PLBD2Q8NHP8 589 aa19.32■□□□□ 0.68
SF3A2-207ENST00000592839 CRAMP1Q96RY5 1269 aa19.32■□□□□ 0.68
SF3A2-207ENST00000592839 DDX60Q8IY21 1712 aaKnown RBP19.31■□□□□ 0.68
SF3A2-207ENST00000592839 GPTP24298 496 aa19.31■□□□□ 0.68
SF3A2-207ENST00000592839 NLRP10Q86W26 655 aa19.31■□□□□ 0.68
SF3A2-207ENST00000592839 NUTM1Q86Y26 1132 aa19.31■□□□□ 0.68
SF3A2-207ENST00000592839 CACNA1FO60840 1977 aa19.3■□□□□ 0.68
SF3A2-207ENST00000592839 GTF2E1P29083 439 aaPredicted RBP19.3■□□□□ 0.68
SF3A2-207ENST00000592839 WWC1Q8IX03 1113 aa19.3■□□□□ 0.68
SF3A2-207ENST00000592839 RTKN2Q8IZC4 609 aa19.3■□□□□ 0.68
SF3A2-207ENST00000592839 RBM46Q8TBY0 533 aaKnown RBP19.3■□□□□ 0.68
SF3A2-207ENST00000592839 PSMD1Q99460 953 aa19.3■□□□□ 0.68
SF3A2-207ENST00000592839 ISCA1Q9BUE6 129 aa19.3■□□□□ 0.68
SF3A2-207ENST00000592839 LRRC37AA6NMS7 1700 aa19.29■□□□□ 0.68
SF3A2-207ENST00000592839 FKBP4Q02790 459 aaKnown RBP eCLIP19.29■□□□□ 0.68
SF3A2-207ENST00000592839 UTP14AQ9BVJ6 771 aaKnown RBP19.29■□□□□ 0.68
SF3A2-207ENST00000592839 LAS1LQ9Y4W2 734 aaKnown RBP19.29■□□□□ 0.68
SF3A2-207ENST00000592839 ANKRD13DQ6ZTN6 518 aa19.28■□□□□ 0.68
SF3A2-207ENST00000592839 MRS2Q9HD23 443 aa19.28■□□□□ 0.68
SF3A2-207ENST00000592839 SCN4AP35499 1836 aa19.27■□□□□ 0.68
SF3A2-207ENST00000592839 SH3TC1Q8TE82 1336 aa19.26■□□□□ 0.67
SF3A2-207ENST00000592839 FAM177BA6PVY3 158 aa19.26■□□□□ 0.67
SF3A2-207ENST00000592839 FSTL1Q12841 308 aa19.26■□□□□ 0.67
SF3A2-207ENST00000592839 NLRP3Q96P20 1036 aa19.26■□□□□ 0.67
SF3A2-207ENST00000592839 C3orf67Q6ZVT6 689 aa19.25■□□□□ 0.67
SF3A2-207ENST00000592839 DNAJC5GQ8N7S2 189 aa19.25■□□□□ 0.67
SF3A2-207ENST00000592839 C8orf58Q8NAV2 365 aa19.25■□□□□ 0.67
SF3A2-207ENST00000592839 NECTIN2Q92692 538 aa19.25■□□□□ 0.67
SF3A2-207ENST00000592839 RPGRQ92834 1020 aaKnown RBP19.25■□□□□ 0.67
SF3A2-207ENST00000592839 RRAGCQ9HB90 399 aa19.25■□□□□ 0.67
SF3A2-207ENST00000592839 POTECB2RU33 542 aa19.24■□□□□ 0.67
SF3A2-207ENST00000592839 AIMP1Q12904 312 aaKnown RBP19.24■□□□□ 0.67
SF3A2-207ENST00000592839 WDR63Q8IWG1 891 aa19.24■□□□□ 0.67
SF3A2-207ENST00000592839 RBM17Q96I25 401 aaKnown RBP19.24■□□□□ 0.67
SF3A2-207ENST00000592839 L3MBTL3Q96JM7 780 aaPredicted RBP19.24■□□□□ 0.67
SF3A2-207ENST00000592839 VEGFAP15692 232 aaPredicted RBP19.23■□□□□ 0.67
SF3A2-207ENST00000592839 DPY19L2Q6NUT2 758 aa19.23■□□□□ 0.67
SF3A2-207ENST00000592839 VPS33BQ9H267 617 aa19.23■□□□□ 0.67
SF3A2-207ENST00000592839 FZD9O00144 591 aa19.22■□□□□ 0.67
SF3A2-207ENST00000592839 SF3B3Q15393 1217 aaKnown RBP19.22■□□□□ 0.67
SF3A2-207ENST00000592839 CCDC30Q5VVM6 783 aa19.22■□□□□ 0.67
SF3A2-207ENST00000592839 LTBP1Q14766 1721 aa19.22■□□□□ 0.67
SF3A2-207ENST00000592839 COL4A5P29400 1685 aa19.21■□□□□ 0.67
SF3A2-207ENST00000592839 TMC4Q7Z404 712 aa19.21■□□□□ 0.67
SF3A2-207ENST00000592839 RTFDC1Q9BY42 306 aaPredicted RBP19.21■□□□□ 0.67
SF3A2-207ENST00000592839 ZNF219Q9P2Y4 722 aaPredicted RBP19.21■□□□□ 0.67
SF3A2-207ENST00000592839 ATP6V0A2Q9Y487 856 aa19.21■□□□□ 0.67
SF3A2-207ENST00000592839 ADAMTSL1Q8N6G6 1762 aa19.21■□□□□ 0.67
SF3A2-207ENST00000592839 ABCC4O15439 1325 aa19.21■□□□□ 0.67
SF3A2-207ENST00000592839 PPEF1O14829 653 aaPredicted RBP19.2■□□□□ 0.66
SF3A2-207ENST00000592839 BBOX1O75936 387 aa19.2■□□□□ 0.66
SF3A2-207ENST00000592839 IARSP41252 1262 aaKnown RBP19.2■□□□□ 0.66
SF3A2-207ENST00000592839 OLFM4Q6UX06 510 aa19.2■□□□□ 0.66
SF3A2-207ENST00000592839 TSPYL6Q8N831 410 aa19.2■□□□□ 0.66
SF3A2-207ENST00000592839 TRMT112Q9UI30 125 aaKnown RBP19.2■□□□□ 0.66
SF3A2-207ENST00000592839 DUOX1Q9NRD9 1551 aa19.19■□□□□ 0.66
SF3A2-207ENST00000592839 GOLGA2Q08379 1002 aa19.19■□□□□ 0.66
SF3A2-207ENST00000592839 CCDC191Q8NCU4 936 aa19.19■□□□□ 0.66
SF3A2-207ENST00000592839 PHAXQ9H814 394 aaKnown RBP19.19■□□□□ 0.66
SF3A2-207ENST00000592839 SMC1BQ8NDV3 1235 aa19.18■□□□□ 0.66
SF3A2-207ENST00000592839 TSR2Q969E8 191 aaKnown RBP19.18■□□□□ 0.66
SF3A2-207ENST00000592839 ZNF521Q96K83 1311 aa19.18■□□□□ 0.66
SF3A2-207ENST00000592839 FANCIQ9NVI1 1328 aa19.18■□□□□ 0.66
SF3A2-207ENST00000592839 DDX58O95786 925 aaKnown RBP19.17■□□□□ 0.66
SF3A2-207ENST00000592839 GRAPQ13588 217 aa19.17■□□□□ 0.66
SF3A2-207ENST00000592839 TWISTNBQ3B726 338 aaPredicted RBP19.17■□□□□ 0.66
SF3A2-207ENST00000592839 SP8Q8IXZ3 490 aa19.17■□□□□ 0.66
SF3A2-207ENST00000592839 SYNE4Q8N205 404 aa19.17■□□□□ 0.66
SF3A2-207ENST00000592839 ZBTB38Q8NAP3 1195 aaPredicted RBP19.17■□□□□ 0.66
SF3A2-207ENST00000592839 GRAPLQ8TC17 118 aaPredicted RBP19.17■□□□□ 0.66
SF3A2-207ENST00000592839 METTL22Q9BUU2 404 aaPredicted RBP19.17■□□□□ 0.66
SF3A2-207ENST00000592839 ZNF277Q9NRM2 450 aaPredicted RBP19.17■□□□□ 0.66
SF3A2-207ENST00000592839 HCLS1P14317 486 aaPredicted RBP19.16■□□□□ 0.66
SF3A2-207ENST00000592839 HSP90B1P14625 803 aaKnown RBP19.16■□□□□ 0.66
SF3A2-207ENST00000592839 TAF1P21675 1872 aa19.16■□□□□ 0.66
SF3A2-207ENST00000592839 IQCA1LA6NCM1 817 aa19.15■□□□□ 0.66
SF3A2-207ENST00000592839 ELL2O00472 640 aaPredicted RBP19.15■□□□□ 0.66
SF3A2-207ENST00000592839 KSR2Q6VAB6 950 aa19.15■□□□□ 0.66
SF3A2-207ENST00000592839 RIC3Q7Z5B4 369 aa19.15■□□□□ 0.66
SF3A2-207ENST00000592839 KLRG1Q96E93 195 aa19.15■□□□□ 0.66
SF3A2-207ENST00000592839 CDHR2Q9BYE9 1310 aa19.15■□□□□ 0.66
SF3A2-207ENST00000592839 MYH3P11055 1940 aa19.15■□□□□ 0.66
SF3A2-207ENST00000592839 COL4A1P02462 1669 aa19.14■□□□□ 0.66
SF3A2-207ENST00000592839 PCCAP05165 728 aaPredicted RBP19.14■□□□□ 0.65
SF3A2-207ENST00000592839 DDX46Q7L014 1031 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms