RNA–Protein interactions for RNA: ENST00000592706.5

GFAP-223, Transcript of glial fibrillary acidic protein, human

TSL 4

Gene GFAP, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-223	ENST00000592706	CRY2	Q49AN0	593 aa		13.37	□□□□□ -0.27
GFAP-223	ENST00000592706	ERFE	Q4G0M1	354 aa		13.37	□□□□□ -0.27
GFAP-223	ENST00000592706	PLBD2	Q8NHP8	589 aa		13.37	□□□□□ -0.27
GFAP-223	ENST00000592706	MYH3	P11055	1940 aa		13.37	□□□□□ -0.27
GFAP-223	ENST00000592706	C1QTNF8	P60827	252 aa		13.36	□□□□□ -0.27
GFAP-223	ENST00000592706	LRRC37A	A6NMS7	1700 aa		13.36	□□□□□ -0.27
GFAP-223	ENST00000592706	ALDH1B1	P30837	517 aa		13.35	□□□□□ -0.27
GFAP-223	ENST00000592706	GOLGA2	Q08379	1002 aa		13.35	□□□□□ -0.27
GFAP-223	ENST00000592706	TCIRG1	Q13488	830 aa		13.35	□□□□□ -0.27
GFAP-223	ENST00000592706	CCDC93	Q567U6	631 aa		13.35	□□□□□ -0.27
GFAP-223	ENST00000592706	CCDC30	Q5VVM6	783 aa		13.35	□□□□□ -0.27
GFAP-223	ENST00000592706	NLRP10	Q86W26	655 aa		13.35	□□□□□ -0.27
GFAP-223	ENST00000592706	C8orf58	Q8NAV2	365 aa		13.35	□□□□□ -0.27
GFAP-223	ENST00000592706	RPGR	Q92834	1020 aa	Known RBP	13.35	□□□□□ -0.27
GFAP-223	ENST00000592706	TSR2	Q969E8	191 aa	Known RBP	13.35	□□□□□ -0.27
GFAP-223	ENST00000592706	UTP14A	Q9BVJ6	771 aa	Known RBP	13.35	□□□□□ -0.27
GFAP-223	ENST00000592706	TAOK3	Q9H2K8	898 aa		13.35	□□□□□ -0.27
GFAP-223	ENST00000592706	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.35	□□□□□ -0.27
GFAP-223	ENST00000592706	WDR90	Q96KV7	1748 aa		13.35	□□□□□ -0.27
GFAP-223	ENST00000592706	KDM2B	Q8NHM5	1336 aa		13.35	□□□□□ -0.27
GFAP-223	ENST00000592706	TAF1	P21675	1872 aa		13.34	□□□□□ -0.27
GFAP-223	ENST00000592706	SENP3-EIF4A1	A0A087X0R7	540 aa		13.34	□□□□□ -0.27
GFAP-223	ENST00000592706	ELL2	O00472	640 aa	Predicted RBP	13.34	□□□□□ -0.27
GFAP-223	ENST00000592706	ANKRD13D	Q6ZTN6	518 aa		13.34	□□□□□ -0.27
GFAP-223	ENST00000592706	FAM9B	Q8IZU0	186 aa		13.34	□□□□□ -0.27
GFAP-223	ENST00000592706	SNED1	Q8TER0	1413 aa		13.33	□□□□□ -0.28
GFAP-223	ENST00000592706	HOXA10	P31260	410 aa	Predicted RBP	13.33	□□□□□ -0.28
GFAP-223	ENST00000592706	PRELP	P51888	382 aa		13.33	□□□□□ -0.28
GFAP-223	ENST00000592706	WDR63	Q8IWG1	891 aa		13.33	□□□□□ -0.28
GFAP-223	ENST00000592706	C7orf43	Q8WVR3	580 aa		13.33	□□□□□ -0.28
GFAP-223	ENST00000592706	FANCI	Q9NVI1	1328 aa		13.33	□□□□□ -0.28
GFAP-223	ENST00000592706	KIF3C	O14782	793 aa		13.32	□□□□□ -0.28
GFAP-223	ENST00000592706	TWISTNB	Q3B726	338 aa	Predicted RBP	13.32	□□□□□ -0.28
GFAP-223	ENST00000592706	SLC10A5	Q5PT55	438 aa		13.32	□□□□□ -0.28
GFAP-223	ENST00000592706	NLRP3	Q96P20	1036 aa		13.32	□□□□□ -0.28
GFAP-223	ENST00000592706	ISCA1	Q9BUE6	129 aa		13.32	□□□□□ -0.28
GFAP-223	ENST00000592706	SH3TC1	Q8TE82	1336 aa		13.32	□□□□□ -0.28
GFAP-223	ENST00000592706	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
GFAP-223	ENST00000592706	RTKN2	Q8IZC4	609 aa		13.31	□□□□□ -0.28
GFAP-223	ENST00000592706	TSPYL6	Q8N831	410 aa		13.31	□□□□□ -0.28
GFAP-223	ENST00000592706	RBM17	Q96I25	401 aa	Known RBP	13.31	□□□□□ -0.28
GFAP-223	ENST00000592706	CRAMP1	Q96RY5	1269 aa		13.31	□□□□□ -0.28
GFAP-223	ENST00000592706	STK31	Q9BXU1	1019 aa		13.31	□□□□□ -0.28
GFAP-223	ENST00000592706	PHAX	Q9H814	394 aa	Known RBP	13.31	□□□□□ -0.28
GFAP-223	ENST00000592706	TRMT112	Q9UI30	125 aa	Known RBP	13.31	□□□□□ -0.28
GFAP-223	ENST00000592706	SALL2	Q9Y467	1007 aa	Predicted RBP	13.31	□□□□□ -0.28
GFAP-223	ENST00000592706	SCN4A	P35499	1836 aa		13.31	□□□□□ -0.28
GFAP-223	ENST00000592706	SPEF2	Q9C093	1822 aa		13.3	□□□□□ -0.28
GFAP-223	ENST00000592706	DDX58	O95786	925 aa	Known RBP	13.3	□□□□□ -0.28
GFAP-223	ENST00000592706	CC2D2B	Q6DHV5	1058 aa		13.3	□□□□□ -0.28
GFAP-223	ENST00000592706	C3orf67	Q6ZVT6	689 aa		13.3	□□□□□ -0.28
GFAP-223	ENST00000592706	RIC3	Q7Z5B4	369 aa		13.3	□□□□□ -0.28
GFAP-223	ENST00000592706	MIER1	Q8N108	512 aa		13.3	□□□□□ -0.28
GFAP-223	ENST00000592706	NMRK2	Q9NPI5	230 aa		13.3	□□□□□ -0.28
GFAP-223	ENST00000592706	PPEF1	O14829	653 aa	Predicted RBP	13.29	□□□□□ -0.28
GFAP-223	ENST00000592706	TRIM28	Q13263	835 aa	Known RBP	13.29	□□□□□ -0.28
GFAP-223	ENST00000592706	GRIPAP1	Q4V328	841 aa		13.29	□□□□□ -0.28
GFAP-223	ENST00000592706	MYH16	Q9H6N6	1097 aa		13.29	□□□□□ -0.28
GFAP-223	ENST00000592706	ABCC4	O15439	1325 aa		13.29	□□□□□ -0.28
GFAP-223	ENST00000592706	GLTPD2	A6NH11	291 aa		13.28	□□□□□ -0.28
GFAP-223	ENST00000592706	ATP5J2-PTCD1	G3V325	749 aa		13.28	□□□□□ -0.28
GFAP-223	ENST00000592706	PSMD1	Q99460	953 aa		13.28	□□□□□ -0.28
GFAP-223	ENST00000592706	LTBP1	Q14766	1721 aa		13.27	□□□□□ -0.28
GFAP-223	ENST00000592706	HCLS1	P14317	486 aa	Predicted RBP	13.27	□□□□□ -0.29
GFAP-223	ENST00000592706	OLFM4	Q6UX06	510 aa		13.27	□□□□□ -0.29
GFAP-223	ENST00000592706	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.27	□□□□□ -0.29
GFAP-223	ENST00000592706	METTL22	Q9BUU2	404 aa	Predicted RBP	13.27	□□□□□ -0.29
GFAP-223	ENST00000592706	TOMM70	O94826	608 aa		13.26	□□□□□ -0.29
GFAP-223	ENST00000592706	HSP90B1	P14625	803 aa	Known RBP	13.26	□□□□□ -0.29
GFAP-223	ENST00000592706	DPY19L2	Q6NUT2	758 aa		13.26	□□□□□ -0.29
GFAP-223	ENST00000592706	DDX46	Q7L014	1031 aa	Known RBP	13.26	□□□□□ -0.29
GFAP-223	ENST00000592706	SYNE4	Q8N205	404 aa		13.26	□□□□□ -0.29
GFAP-223	ENST00000592706	CCDC191	Q8NCU4	936 aa		13.26	□□□□□ -0.29
GFAP-223	ENST00000592706	FAM89A	Q96GI7	184 aa		13.26	□□□□□ -0.29
GFAP-223	ENST00000592706	ZNF521	Q96K83	1311 aa		13.26	□□□□□ -0.29
GFAP-223	ENST00000592706	MYD88	Q99836	296 aa		13.26	□□□□□ -0.29
GFAP-223	ENST00000592706	TMX4	Q9H1E5	349 aa	Predicted RBP	13.26	□□□□□ -0.29
GFAP-223	ENST00000592706	DUOX1	Q9NRD9	1551 aa		13.26	□□□□□ -0.29
GFAP-223	ENST00000592706	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.26	□□□□□ -0.29
GFAP-223	ENST00000592706	COL4A1	P02462	1669 aa		13.25	□□□□□ -0.29
GFAP-223	ENST00000592706	COL4A5	P29400	1685 aa		13.25	□□□□□ -0.29
GFAP-223	ENST00000592706	CCER2	I3L3R5	266 aa		13.25	□□□□□ -0.29
GFAP-223	ENST00000592706	IRS4	O14654	1257 aa	Predicted RBP	13.25	□□□□□ -0.29
GFAP-223	ENST00000592706	TCERG1	O14776	1098 aa	Known RBP	13.25	□□□□□ -0.29
GFAP-223	ENST00000592706	IARS	P41252	1262 aa	Known RBP	13.25	□□□□□ -0.29
GFAP-223	ENST00000592706	EXOSC9	Q06265	439 aa	Known RBP	13.25	□□□□□ -0.29
GFAP-223	ENST00000592706	GRAP	Q13588	217 aa		13.25	□□□□□ -0.29
GFAP-223	ENST00000592706	KSR2	Q6VAB6	950 aa		13.25	□□□□□ -0.29
GFAP-223	ENST00000592706	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.25	□□□□□ -0.29
GFAP-223	ENST00000592706	RBM46	Q8TBY0	533 aa	Known RBP	13.25	□□□□□ -0.29
GFAP-223	ENST00000592706	GRAPL	Q8TC17	118 aa	Predicted RBP	13.25	□□□□□ -0.29
GFAP-223	ENST00000592706	CWC25	Q9NXE8	425 aa	Predicted RBP	13.25	□□□□□ -0.29
GFAP-223	ENST00000592706	MAP3K2	Q9Y2U5	619 aa		13.25	□□□□□ -0.29
GFAP-223	ENST00000592706	PI4KAP2	A4QPH2	592 aa		13.24	□□□□□ -0.29
GFAP-223	ENST00000592706	BBOX1	O75936	387 aa		13.24	□□□□□ -0.29
GFAP-223	ENST00000592706	SLC4A2	P04920	1241 aa		13.24	□□□□□ -0.29
GFAP-223	ENST00000592706	PCCA	P05165	728 aa	Predicted RBP	13.24	□□□□□ -0.29
GFAP-223	ENST00000592706	NEXN	Q0ZGT2	675 aa		13.24	□□□□□ -0.29
GFAP-223	ENST00000592706	FLII	Q13045	1269 aa		13.24	□□□□□ -0.29
GFAP-223	ENST00000592706	TMC4	Q7Z404	712 aa		13.24	□□□□□ -0.29

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