RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 PKD1L3Q7Z443 1732 aa13.9□□□□□ -0.18
ZNF540-210ENST00000592533 MYH15Q9Y2K3 1946 aa13.9□□□□□ -0.19
ZNF540-210ENST00000592533 COL18A1P39060 1754 aa13.89□□□□□ -0.19
ZNF540-210ENST00000592533 ZKSCAN1P17029 563 aaPredicted RBP13.89□□□□□ -0.19
ZNF540-210ENST00000592533 CWF19L2Q2TBE0 894 aaKnown RBP13.89□□□□□ -0.19
ZNF540-210ENST00000592533 CREB3L3Q68CJ9 461 aa13.89□□□□□ -0.19
ZNF540-210ENST00000592533 ANKRD24Q8TF21 1146 aa13.89□□□□□ -0.19
ZNF540-210ENST00000592533 RFX7Q2KHR2 1363 aa13.89□□□□□ -0.19
ZNF540-210ENST00000592533 XPCQ01831 940 aaPredicted RBP13.89□□□□□ -0.19
ZNF540-210ENST00000592533 TSGA10IPQ3SY00 556 aa13.89□□□□□ -0.19
ZNF540-210ENST00000592533 RBM8AQ9Y5S9 174 aaKnown RBP13.89□□□□□ -0.19
ZNF540-210ENST00000592533 PARP4Q9UKK3 1724 aaKnown RBP13.89□□□□□ -0.19
ZNF540-210ENST00000592533 CPA1P15085 419 aa13.88□□□□□ -0.19
ZNF540-210ENST00000592533 CCDC83Q8IWF9 413 aa13.88□□□□□ -0.19
ZNF540-210ENST00000592533 EAF2Q96CJ1 260 aaPredicted RBP13.88□□□□□ -0.19
ZNF540-210ENST00000592533 BICC1Q9H694 974 aaKnown RBP13.88□□□□□ -0.19
ZNF540-210ENST00000592533 PSMA5P28066 241 aa13.88□□□□□ -0.19
ZNF540-210ENST00000592533 ME3Q16798 604 aa13.88□□□□□ -0.19
ZNF540-210ENST00000592533 ELP1O95163 1332 aa13.88□□□□□ -0.19
ZNF540-210ENST00000592533 FOXD4L6Q3SYB3 417 aaPredicted RBP13.88□□□□□ -0.19
ZNF540-210ENST00000592533 FOXD4L3Q6VB84 417 aaPredicted RBP13.88□□□□□ -0.19
ZNF540-210ENST00000592533 GLI3P10071 1580 aa13.88□□□□□ -0.19
ZNF540-210ENST00000592533 ADAMTSL3P82987 1691 aa13.87□□□□□ -0.19
ZNF540-210ENST00000592533 G3BP1Q13283 466 aaKnown RBP eCLIP13.87□□□□□ -0.19
ZNF540-210ENST00000592533 NMIQ13287 307 aaPredicted RBP13.87□□□□□ -0.19
ZNF540-210ENST00000592533 PDCL3Q9H2J4 239 aa13.87□□□□□ -0.19
ZNF540-210ENST00000592533 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.87□□□□□ -0.19
ZNF540-210ENST00000592533 KDM6AO15550 1401 aaPredicted RBP13.87□□□□□ -0.19
ZNF540-210ENST00000592533 SLC27A2O14975 620 aa13.87□□□□□ -0.19
ZNF540-210ENST00000592533 IGKV5-2P06315 115 aa13.87□□□□□ -0.19
ZNF540-210ENST00000592533 KIAA2012Q0VF49 1180 aa13.87□□□□□ -0.19
ZNF540-210ENST00000592533 ANKRD1Q15327 319 aa13.87□□□□□ -0.19
ZNF540-210ENST00000592533 LAMA4Q16363 1823 aa13.87□□□□□ -0.19
ZNF540-210ENST00000592533 PRAMEF22A3QJZ6 481 aa13.86□□□□□ -0.19
ZNF540-210ENST00000592533 HMG20BQ9P0W2 317 aa13.86□□□□□ -0.19
ZNF540-210ENST00000592533 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.86□□□□□ -0.19
ZNF540-210ENST00000592533 GLIPR1L2Q4G1C9 344 aa13.86□□□□□ -0.19
ZNF540-210ENST00000592533 LARP1Q6PKG0 1096 aaKnown RBP13.86□□□□□ -0.19
ZNF540-210ENST00000592533 FAM227BQ96M60 508 aa13.86□□□□□ -0.19
ZNF540-210ENST00000592533 TPCN1Q9ULQ1 816 aa13.86□□□□□ -0.19
ZNF540-210ENST00000592533 R3HCC1Q9Y3T6 440 aaKnown RBP13.86□□□□□ -0.19
ZNF540-210ENST00000592533 DNM1Q05193 864 aaKnown RBP13.86□□□□□ -0.19
ZNF540-210ENST00000592533 USPL1Q5W0Q7 1092 aa13.86□□□□□ -0.19
ZNF540-210ENST00000592533 LARP6Q9BRS8 491 aaKnown RBP13.86□□□□□ -0.19
ZNF540-210ENST00000592533 FIBPO43427 364 aa13.85□□□□□ -0.19
ZNF540-210ENST00000592533 PDCP20941 246 aa13.85□□□□□ -0.19
ZNF540-210ENST00000592533 RNF20Q5VTR2 975 aa13.85□□□□□ -0.19
ZNF540-210ENST00000592533 SASS6Q6UVJ0 657 aa13.85□□□□□ -0.19
ZNF540-210ENST00000592533 ERBB3P21860 1342 aa13.85□□□□□ -0.19
ZNF540-210ENST00000592533 NEURL1BA8MQ27 555 aa13.85□□□□□ -0.19
ZNF540-210ENST00000592533 A0A0D9SFI3 127 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 KDM4AO75164 1064 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 PIBF1Q8WXW3 757 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 AXIN2Q9Y2T1 843 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 DYNC1I1O14576 645 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 PTMAP06454 111 aaKnown RBP13.84□□□□□ -0.19
ZNF540-210ENST00000592533 HCLS1P14317 486 aaPredicted RBP13.84□□□□□ -0.19
ZNF540-210ENST00000592533 RPS6KB1P23443 525 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 ZNF790Q6PG37 636 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 COPRSQ9NQ92 184 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 NUP188Q5SRE5 1749 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 ADCY5O95622 1261 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 GCKRQ14397 625 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 LRP10Q7Z4F1 713 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 MAP7D2Q96T17 732 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 METTL22Q9BUU2 404 aaPredicted RBP13.84□□□□□ -0.19
ZNF540-210ENST00000592533 SLC52A2Q9HAB3 445 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 TLR7Q9NYK1 1049 aaKnown RBP13.84□□□□□ -0.19
ZNF540-210ENST00000592533 USP25Q9UHP3 1055 aa13.84□□□□□ -0.19
ZNF540-210ENST00000592533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.83□□□□□ -0.2
ZNF540-210ENST00000592533 NPHP3Q7Z494 1330 aa13.83□□□□□ -0.2
ZNF540-210ENST00000592533 BLOC1S2Q6QNY1 142 aa13.83□□□□□ -0.2
ZNF540-210ENST00000592533 ORAI2Q96SN7 254 aa13.83□□□□□ -0.2
ZNF540-210ENST00000592533 SPTLC3Q9NUV7 552 aa13.83□□□□□ -0.2
ZNF540-210ENST00000592533 SPEF2Q9C093 1822 aa13.82□□□□□ -0.2
ZNF540-210ENST00000592533 ZBTB7CA1YPR0 619 aa13.82□□□□□ -0.2
ZNF540-210ENST00000592533 ATP5JP18859 108 aa13.82□□□□□ -0.2
ZNF540-210ENST00000592533 KRT85P78386 507 aa13.82□□□□□ -0.2
ZNF540-210ENST00000592533 NEXNQ0ZGT2 675 aa13.82□□□□□ -0.2
ZNF540-210ENST00000592533 TOB2Q14106 344 aaPredicted RBP13.82□□□□□ -0.2
ZNF540-210ENST00000592533 CCDC8Q9H0W5 538 aaPredicted RBP13.82□□□□□ -0.2
ZNF540-210ENST00000592533 UQCRHLA0A096LP55 91 aa13.82□□□□□ -0.2
ZNF540-210ENST00000592533 UQCRHP07919 91 aa13.82□□□□□ -0.2
ZNF540-210ENST00000592533 RFX5P48382 616 aaPredicted RBP13.82□□□□□ -0.2
ZNF540-210ENST00000592533 RABL6Q3YEC7 729 aaPredicted RBP13.82□□□□□ -0.2
ZNF540-210ENST00000592533 TICAM2Q86XR7 235 aa13.82□□□□□ -0.2
ZNF540-210ENST00000592533 FSD1Q9BTV5 496 aa13.82□□□□□ -0.2
ZNF540-210ENST00000592533 UBR2Q8IWV8 1755 aa13.82□□□□□ -0.2
ZNF540-210ENST00000592533 C1orf167Q5SNV9 1468 aa13.82□□□□□ -0.2
ZNF540-210ENST00000592533 KRT32Q14532 448 aa13.81□□□□□ -0.2
ZNF540-210ENST00000592533 LARP1BQ659C4 914 aaKnown RBP13.81□□□□□ -0.2
ZNF540-210ENST00000592533 RIC3Q7Z5B4 369 aa13.81□□□□□ -0.2
ZNF540-210ENST00000592533 TJP1Q07157 1748 aa13.81□□□□□ -0.2
ZNF540-210ENST00000592533 TAF5LO75529 589 aa13.81□□□□□ -0.2
ZNF540-210ENST00000592533 KCNJ4P48050 445 aa13.81□□□□□ -0.2
ZNF540-210ENST00000592533 TTC6Q86TZ1 520 aa13.81□□□□□ -0.2
ZNF540-210ENST00000592533 NECAB1Q8N987 351 aa13.81□□□□□ -0.2
ZNF540-210ENST00000592533 CDC37L1Q7L3B6 337 aa13.81□□□□□ -0.2
ZNF540-210ENST00000592533 BOLA2Q9H3K6 86 aa13.81□□□□□ -0.2
ZNF540-210ENST00000592533 TMEM94Q12767 1356 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms