RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 CCDC125Q86Z20 511 aa7.54□□□□□ -1.2
NPC1-213ENST00000591955 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.54□□□□□ -1.2
NPC1-213ENST00000591955 RRAGCQ9HB90 399 aa7.54□□□□□ -1.2
NPC1-213ENST00000591955 RCAN3Q9UKA8 241 aa7.54□□□□□ -1.2
NPC1-213ENST00000591955 GCC2Q8IWJ2 1684 aa7.54□□□□□ -1.2
NPC1-213ENST00000591955 FHOD3Q2V2M9 1422 aa7.53□□□□□ -1.2
NPC1-213ENST00000591955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.53□□□□□ -1.2
NPC1-213ENST00000591955 GRIN2CQ14957 1233 aa7.53□□□□□ -1.2
NPC1-213ENST00000591955 CC2D2BQ6DHV5 1058 aa7.53□□□□□ -1.2
NPC1-213ENST00000591955 TAS1R3Q7RTX0 852 aa7.53□□□□□ -1.2
NPC1-213ENST00000591955 PROCA1Q8NCQ7 364 aaPredicted RBP7.53□□□□□ -1.2
NPC1-213ENST00000591955 KIF15Q9NS87 1388 aa7.53□□□□□ -1.2
NPC1-213ENST00000591955 NUP153P49790 1475 aaKnown RBP7.53□□□□□ -1.2
NPC1-213ENST00000591955 SAMD9Q5K651 1589 aa7.53□□□□□ -1.2
NPC1-213ENST00000591955 NAIPQ13075 1403 aa7.52□□□□□ -1.2
NPC1-213ENST00000591955 POGZQ7Z3K3 1410 aa7.52□□□□□ -1.2
NPC1-213ENST00000591955 NINLQ9Y2I6 1382 aa7.52□□□□□ -1.21
NPC1-213ENST00000591955 TNNT2P45379 298 aaPredicted RBP7.52□□□□□ -1.21
NPC1-213ENST00000591955 UBAP2LQ14157 1087 aaKnown RBP7.52□□□□□ -1.21
NPC1-213ENST00000591955 SH3D19Q5HYK7 790 aa7.52□□□□□ -1.21
NPC1-213ENST00000591955 CD163Q86VB7 1156 aa7.52□□□□□ -1.21
NPC1-213ENST00000591955 KRTAP1-3Q8IUG1 177 aa7.52□□□□□ -1.21
NPC1-213ENST00000591955 GOLGA6L1Q8N7Z2 621 aa7.52□□□□□ -1.21
NPC1-213ENST00000591955 PHF24Q9UPV7 400 aa7.52□□□□□ -1.21
NPC1-213ENST00000591955 UHRF1BP1Q6BDS2 1440 aa7.52□□□□□ -1.21
NPC1-213ENST00000591955 SPATA31E1Q6ZUB1 1445 aa7.52□□□□□ -1.21
NPC1-213ENST00000591955 TAF3Q5VWG9 929 aa7.51□□□□□ -1.21
NPC1-213ENST00000591955 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.51□□□□□ -1.21
NPC1-213ENST00000591955 CYP2U1Q7Z449 544 aa7.51□□□□□ -1.21
NPC1-213ENST00000591955 SMAP1Q8IYB5 467 aaPredicted RBP7.51□□□□□ -1.21
NPC1-213ENST00000591955 TRIM44Q96DX7 344 aaPredicted RBP7.51□□□□□ -1.21
NPC1-213ENST00000591955 UPF2Q9HAU5 1272 aaKnown RBP7.51□□□□□ -1.21
NPC1-213ENST00000591955 FSD2A1L4K1 749 aa7.5□□□□□ -1.21
NPC1-213ENST00000591955 USP17L8P0C7I0 530 aa7.5□□□□□ -1.21
NPC1-213ENST00000591955 SLCO4C1Q6ZQN7 724 aa7.5□□□□□ -1.21
NPC1-213ENST00000591955 ANP32BQ92688 251 aaKnown RBP7.5□□□□□ -1.21
NPC1-213ENST00000591955 EHBP1L1Q8N3D4 1523 aa7.5□□□□□ -1.21
NPC1-213ENST00000591955 PTPRTO14522 1441 aa7.5□□□□□ -1.21
NPC1-213ENST00000591955 MYOM3Q5VTT5 1437 aa7.5□□□□□ -1.21
NPC1-213ENST00000591955 MAPK8IP3Q9UPT6 1336 aa7.5□□□□□ -1.21
NPC1-213ENST00000591955 RPRD2Q5VT52 1461 aaKnown RBP7.49□□□□□ -1.21
NPC1-213ENST00000591955 ABCA6Q8N139 1617 aa7.49□□□□□ -1.21
NPC1-213ENST00000591955 PIK3R2O00459 728 aa7.49□□□□□ -1.21
NPC1-213ENST00000591955 GNB5O14775 395 aa7.49□□□□□ -1.21
NPC1-213ENST00000591955 CHRNA4P43681 627 aa7.49□□□□□ -1.21
NPC1-213ENST00000591955 HS1BP3Q53T59 392 aa7.49□□□□□ -1.21
NPC1-213ENST00000591955 UTP14CQ5TAP6 766 aaKnown RBP7.49□□□□□ -1.21
NPC1-213ENST00000591955 NGEFQ8N5V2 710 aa7.49□□□□□ -1.21
NPC1-213ENST00000591955 TMC1Q8TDI8 760 aa7.49□□□□□ -1.21
NPC1-213ENST00000591955 PNISRQ8TF01 805 aaKnown RBP7.49□□□□□ -1.21
NPC1-213ENST00000591955 GPAMQ9HCL2 828 aa7.49□□□□□ -1.21
NPC1-213ENST00000591955 C9orf84Q5VXU9 1444 aa7.49□□□□□ -1.21
NPC1-213ENST00000591955 DIP2CQ9Y2E4 1556 aa7.49□□□□□ -1.21
NPC1-213ENST00000591955 MYBBP1AQ9BQG0 1328 aaKnown RBP7.49□□□□□ -1.21
NPC1-213ENST00000591955 TCOF1Q13428 1488 aaKnown RBP7.49□□□□□ -1.21
NPC1-213ENST00000591955 IQSEC2Q5JU85 1478 aa7.49□□□□□ -1.21
NPC1-213ENST00000591955 DHX29Q7Z478 1369 aaKnown RBP7.48□□□□□ -1.21
NPC1-213ENST00000591955 C2CD2LO14523 706 aa7.48□□□□□ -1.21
NPC1-213ENST00000591955 TRAK2O60296 914 aa7.48□□□□□ -1.21
NPC1-213ENST00000591955 SCTRP47872 440 aa7.48□□□□□ -1.21
NPC1-213ENST00000591955 LBRQ14739 615 aaKnown RBP7.48□□□□□ -1.21
NPC1-213ENST00000591955 SKOR2Q2VWA4 1001 aaPredicted RBP7.48□□□□□ -1.21
NPC1-213ENST00000591955 MYH16Q9H6N6 1097 aa7.48□□□□□ -1.21
NPC1-213ENST00000591955 SLC24A3Q9HC58 644 aa7.48□□□□□ -1.21
NPC1-213ENST00000591955 ARHGEF10LQ9HCE6 1279 aa7.48□□□□□ -1.21
NPC1-213ENST00000591955 PCDHB9Q9Y5E1 797 aa7.48□□□□□ -1.21
NPC1-213ENST00000591955 CAMSAP1Q5T5Y3 1602 aa7.48□□□□□ -1.21
NPC1-213ENST00000591955 KIF7Q2M1P5 1343 aa7.48□□□□□ -1.21
NPC1-213ENST00000591955 CDK13Q14004 1512 aaKnown RBP7.47□□□□□ -1.21
NPC1-213ENST00000591955 ROCK1Q13464 1354 aa7.47□□□□□ -1.21
NPC1-213ENST00000591955 A0A1B0GTH6 734 aa7.47□□□□□ -1.21
NPC1-213ENST00000591955 ZBBXA8MT70 800 aa7.47□□□□□ -1.21
NPC1-213ENST00000591955 AMPD1P23109 780 aa7.47□□□□□ -1.21
NPC1-213ENST00000591955 DGKGP49619 791 aa7.47□□□□□ -1.21
NPC1-213ENST00000591955 BTBD6Q96KE9 485 aa7.47□□□□□ -1.21
NPC1-213ENST00000591955 TRIM34Q9BYJ4 488 aa7.47□□□□□ -1.21
NPC1-213ENST00000591955 SEMA6BQ9H3T3 888 aa7.47□□□□□ -1.21
NPC1-213ENST00000591955 OSBPL3Q9H4L5 887 aa7.47□□□□□ -1.21
NPC1-213ENST00000591955 RRAGDQ9NQL2 400 aaPredicted RBP7.47□□□□□ -1.21
NPC1-213ENST00000591955 GGA1Q9UJY5 639 aa7.47□□□□□ -1.21
NPC1-213ENST00000591955 ATXN7L1Q9ULK2 861 aaPredicted RBP7.47□□□□□ -1.21
NPC1-213ENST00000591955 ZNF335Q9H4Z2 1342 aaPredicted RBP7.47□□□□□ -1.21
NPC1-213ENST00000591955 SUPT6HQ7KZ85 1726 aaKnown RBP7.47□□□□□ -1.21
NPC1-213ENST00000591955 MYO5CQ9NQX4 1742 aa7.47□□□□□ -1.21
NPC1-213ENST00000591955 ANKRD30AQ9BXX3 1397 aa7.46□□□□□ -1.21
NPC1-213ENST00000591955 UBAP1LF5GYI3 381 aa7.46□□□□□ -1.22
NPC1-213ENST00000591955 FRAT2O75474 233 aaPredicted RBP7.46□□□□□ -1.22
NPC1-213ENST00000591955 BMP4P12644 408 aa7.46□□□□□ -1.22
NPC1-213ENST00000591955 FGD1P98174 961 aa7.46□□□□□ -1.22
NPC1-213ENST00000591955 RNF20Q5VTR2 975 aa7.46□□□□□ -1.22
NPC1-213ENST00000591955 NDFIP2Q9NV92 336 aa7.46□□□□□ -1.22
NPC1-213ENST00000591955 NOP53Q9NZM5 478 aaKnown RBP7.46□□□□□ -1.22
NPC1-213ENST00000591955 ATP10AO60312 1499 aa7.46□□□□□ -1.22
NPC1-213ENST00000591955 MAGI2Q86UL8 1455 aa7.46□□□□□ -1.22
NPC1-213ENST00000591955 KDM2BQ8NHM5 1336 aa7.46□□□□□ -1.22
NPC1-213ENST00000591955 VIRMAQ69YN4 1812 aaKnown RBP7.45□□□□□ -1.22
NPC1-213ENST00000591955 KIF14Q15058 1648 aa7.45□□□□□ -1.22
NPC1-213ENST00000591955 MYO3AQ8NEV4 1616 aa7.45□□□□□ -1.22
NPC1-213ENST00000591955 EPXP11678 715 aa7.45□□□□□ -1.22
NPC1-213ENST00000591955 ZMYM1Q5SVZ6 1142 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms