RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 PIP4K2AP48426 406 aaPredicted RBP24.69■■□□□ 1.54
GCDH-214ENST00000591043 EPHA10Q5JZY3 1008 aa24.69■■□□□ 1.54
GCDH-214ENST00000591043 THRAP3Q9Y2W1 955 aaKnown RBP24.69■■□□□ 1.54
GCDH-214ENST00000591043 EXOC5O00471 708 aa24.68■■□□□ 1.54
GCDH-214ENST00000591043 A1BGP04217 495 aa24.68■■□□□ 1.54
GCDH-214ENST00000591043 NUCB2P80303 420 aa24.68■■□□□ 1.54
GCDH-214ENST00000591043 ATP5J2-PTCD1G3V325 749 aa24.67■■□□□ 1.54
GCDH-214ENST00000591043 EAF2Q96CJ1 260 aaPredicted RBP24.67■■□□□ 1.54
GCDH-214ENST00000591043 NRAPQ86VF7 1730 aa24.67■■□□□ 1.54
GCDH-214ENST00000591043 BCL9O00512 1426 aa24.67■■□□□ 1.54
GCDH-214ENST00000591043 PTPN12Q05209 780 aaKnown RBP24.67■■□□□ 1.54
GCDH-214ENST00000591043 TRIM28Q13263 835 aaKnown RBP24.67■■□□□ 1.54
GCDH-214ENST00000591043 TTLL7Q6ZT98 887 aa24.67■■□□□ 1.54
GCDH-214ENST00000591043 ATG3Q9NT62 314 aa24.67■■□□□ 1.54
GCDH-214ENST00000591043 PIGBQ92521 554 aa24.66■■□□□ 1.54
GCDH-214ENST00000591043 NWD2Q9ULI1 1742 aa24.66■■□□□ 1.54
GCDH-214ENST00000591043 NEK4P51957 841 aa24.65■■□□□ 1.54
GCDH-214ENST00000591043 KIF6Q6ZMV9 814 aa24.65■■□□□ 1.54
GCDH-214ENST00000591043 TICAM2Q86XR7 235 aa24.65■■□□□ 1.54
GCDH-214ENST00000591043 MAP4K4O95819 1239 aaPredicted RBP24.65■■□□□ 1.54
GCDH-214ENST00000591043 POTEAQ6S8J7 498 aa24.65■■□□□ 1.54
GCDH-214ENST00000591043 CLEC17AQ6ZS10 378 aa24.65■■□□□ 1.54
GCDH-214ENST00000591043 SIL1Q9H173 461 aa24.65■■□□□ 1.54
GCDH-214ENST00000591043 RFX7Q2KHR2 1363 aa24.64■■□□□ 1.54
GCDH-214ENST00000591043 ISCA1Q9BUE6 129 aa24.64■■□□□ 1.53
GCDH-214ENST00000591043 GPR108Q9NPR9 543 aa24.64■■□□□ 1.53
GCDH-214ENST00000591043 FOXO4P98177 505 aa24.63■■□□□ 1.53
GCDH-214ENST00000591043 TCIRG1Q13488 830 aa24.63■■□□□ 1.53
GCDH-214ENST00000591043 LSG1Q9H089 658 aaKnown RBP24.63■■□□□ 1.53
GCDH-214ENST00000591043 TNPO1Q92973 898 aaKnown RBP24.62■■□□□ 1.53
GCDH-214ENST00000591043 FBXO3Q9UK99 471 aa24.62■■□□□ 1.53
GCDH-214ENST00000591043 ANKRD36CQ5JPF3 1778 aa24.62■■□□□ 1.53
GCDH-214ENST00000591043 ATP5JP18859 108 aa24.62■■□□□ 1.53
GCDH-214ENST00000591043 HSP90AB3PQ58FF7 597 aa24.62■■□□□ 1.53
GCDH-214ENST00000591043 TNNI3KQ59H18 835 aa24.62■■□□□ 1.53
GCDH-214ENST00000591043 LMBR1LQ6UX01 489 aa24.62■■□□□ 1.53
GCDH-214ENST00000591043 SNRKQ9NRH2 765 aa24.62■■□□□ 1.53
GCDH-214ENST00000591043 FPGT-TNNI3KV9GXZ4 949 aa24.62■■□□□ 1.53
GCDH-214ENST00000591043 CWC27Q6UX04 472 aaKnown RBP24.61■■□□□ 1.53
GCDH-214ENST00000591043 CCDC8Q9H0W5 538 aaPredicted RBP24.61■■□□□ 1.53
GCDH-214ENST00000591043 ZBTB3Q9H5J0 574 aa24.61■■□□□ 1.53
GCDH-214ENST00000591043 ASAP1Q9ULH1 1129 aa24.61■■□□□ 1.53
GCDH-214ENST00000591043 INTS4Q96HW7 963 aaKnown RBP24.6■■□□□ 1.53
GCDH-214ENST00000591043 DOT1LQ8TEK3 1739 aa24.6■■□□□ 1.53
GCDH-214ENST00000591043 GOLGA6L22H0YM25 854 aa24.59■■□□□ 1.53
GCDH-214ENST00000591043 CIAO1O76071 339 aa24.59■■□□□ 1.53
GCDH-214ENST00000591043 IL15P40933 162 aaPredicted RBP24.59■■□□□ 1.53
GCDH-214ENST00000591043 SKOR2Q2VWA4 1001 aaPredicted RBP24.59■■□□□ 1.53
GCDH-214ENST00000591043 DNAJC10Q8IXB1 793 aa24.59■■□□□ 1.53
GCDH-214ENST00000591043 PALD1Q9ULE6 856 aa24.59■■□□□ 1.53
GCDH-214ENST00000591043 CUL4AQ13619 759 aa24.58■■□□□ 1.53
GCDH-214ENST00000591043 KLHDC4Q8TBB5 520 aa24.58■■□□□ 1.53
GCDH-214ENST00000591043 TFCP2Q12800 502 aa24.57■■□□□ 1.52
GCDH-214ENST00000591043 PLA2G12BQ9BX93 195 aa24.57■■□□□ 1.52
GCDH-214ENST00000591043 SPATA31A1Q5TZJ5 1347 aa24.57■■□□□ 1.52
GCDH-214ENST00000591043 MAP3K15Q6ZN16 1313 aa24.57■■□□□ 1.52
GCDH-214ENST00000591043 CICQ96RK0 1608 aaPredicted RBP24.57■■□□□ 1.52
GCDH-214ENST00000591043 PCCAP05165 728 aaPredicted RBP24.57■■□□□ 1.52
GCDH-214ENST00000591043 SPEF2Q9C093 1822 aa24.56■■□□□ 1.52
GCDH-214ENST00000591043 KCNB2Q92953 911 aa24.56■■□□□ 1.52
GCDH-214ENST00000591043 TMX3Q96JJ7 454 aa24.56■■□□□ 1.52
GCDH-214ENST00000591043 IL25Q9H293 177 aa24.56■■□□□ 1.52
GCDH-214ENST00000591043 FOXD4L1Q9NU39 408 aa24.56■■□□□ 1.52
GCDH-214ENST00000591043 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.56■■□□□ 1.52
GCDH-214ENST00000591043 GIGYF2Q6Y7W6 1299 aaKnown RBP24.55■■□□□ 1.52
GCDH-214ENST00000591043 JARID2Q92833 1246 aaPredicted RBP24.55■■□□□ 1.52
GCDH-214ENST00000591043 FSD1Q9BTV5 496 aa24.55■■□□□ 1.52
GCDH-214ENST00000591043 TM6SF1Q9BZW5 370 aa24.55■■□□□ 1.52
GCDH-214ENST00000591043 BOLA2Q9H3K6 86 aa24.54■■□□□ 1.52
GCDH-214ENST00000591043 TLR7Q9NYK1 1049 aaKnown RBP24.54■■□□□ 1.52
GCDH-214ENST00000591043 DBNLQ9UJU6 430 aaKnown RBP24.54■■□□□ 1.52
GCDH-214ENST00000591043 CHMP3Q9Y3E7 222 aa24.54■■□□□ 1.52
GCDH-214ENST00000591043 SNX14Q9Y5W7 946 aa24.54■■□□□ 1.52
GCDH-214ENST00000591043 CCDC171Q6TFL3 1326 aa24.54■■□□□ 1.52
GCDH-214ENST00000591043 CDHR2Q9BYE9 1310 aa24.54■■□□□ 1.52
GCDH-214ENST00000591043 TRAK2O60296 914 aa24.54■■□□□ 1.52
GCDH-214ENST00000591043 CYP2E1P05181 493 aaPredicted RBP24.54■■□□□ 1.52
GCDH-214ENST00000591043 CYP19A1P11511 503 aaPredicted RBP24.54■■□□□ 1.52
GCDH-214ENST00000591043 EYA2O00167 538 aa24.53■■□□□ 1.52
GCDH-214ENST00000591043 ZBTB38Q8NAP3 1195 aaPredicted RBP24.53■■□□□ 1.52
GCDH-214ENST00000591043 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.53■■□□□ 1.52
GCDH-214ENST00000591043 ZKSCAN1P17029 563 aaPredicted RBP24.52■■□□□ 1.52
GCDH-214ENST00000591043 DDB1Q16531 1140 aa24.52■■□□□ 1.52
GCDH-214ENST00000591043 MYH3P11055 1940 aa24.52■■□□□ 1.52
GCDH-214ENST00000591043 KAT6BQ8WYB5 2073 aa24.52■■□□□ 1.52
GCDH-214ENST00000591043 ERVV-1B6SEH8 477 aa24.52■■□□□ 1.52
GCDH-214ENST00000591043 IL6STP40189 918 aaPredicted RBP24.52■■□□□ 1.52
GCDH-214ENST00000591043 BARGINQ6ZT62 677 aa24.52■■□□□ 1.52
GCDH-214ENST00000591043 HAUS7Q99871 368 aa24.52■■□□□ 1.52
GCDH-214ENST00000591043 NUP98P52948 1817 aa24.51■■□□□ 1.51
GCDH-214ENST00000591043 CCDC57Q2TAC2 916 aa24.51■■□□□ 1.51
GCDH-214ENST00000591043 RNF20Q5VTR2 975 aa24.51■■□□□ 1.51
GCDH-214ENST00000591043 ATG9AQ7Z3C6 839 aa24.51■■□□□ 1.51
GCDH-214ENST00000591043 MED23Q9ULK4 1368 aa24.5■■□□□ 1.51
GCDH-214ENST00000591043 NMIQ13287 307 aaPredicted RBP24.5■■□□□ 1.51
GCDH-214ENST00000591043 MAP4K1Q92918 833 aa24.5■■□□□ 1.51
GCDH-214ENST00000591043 SLIT2O94813 1529 aa24.5■■□□□ 1.51
GCDH-214ENST00000591043 SSFA2P28290 1259 aa24.49■■□□□ 1.51
GCDH-214ENST00000591043 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.49■■□□□ 1.51
GCDH-214ENST00000591043 JCADQ9P266 1359 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms