RNA–Protein interactions for RNA: ENST00000591028.1

NFIX-213, Transcript of nuclear factor I X, humanhuman

TSL 3

Gene NFIX, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-213ENST00000591028 ALDH1L2Q3SY69 923 aa20.38■□□□□ 0.85
NFIX-213ENST00000591028 NBPF10Q6P3W6 841 aaKnown RBP20.38■□□□□ 0.85
NFIX-213ENST00000591028 CLEC4GQ6UXB4 293 aa20.38■□□□□ 0.85
NFIX-213ENST00000591028 NBPF15Q8N660 670 aa20.38■□□□□ 0.85
NFIX-213ENST00000591028 PDIA6Q15084 440 aa20.36■□□□□ 0.85
NFIX-213ENST00000591028 PRPF40BQ6NWY9 871 aaKnown RBP20.36■□□□□ 0.85
NFIX-213ENST00000591028 SMC1BQ8NDV3 1235 aa20.36■□□□□ 0.85
NFIX-213ENST00000591028 NECTIN2Q92692 538 aa20.36■□□□□ 0.85
NFIX-213ENST00000591028 PDZRN3Q9UPQ7 1066 aa20.36■□□□□ 0.85
NFIX-213ENST00000591028 SRGNP10124 158 aa20.35■□□□□ 0.85
NFIX-213ENST00000591028 HSP90AB3PQ58FF7 597 aa20.35■□□□□ 0.85
NFIX-213ENST00000591028 NBPF5PQ86XG9 351 aaPredicted RBP20.35■□□□□ 0.85
NFIX-213ENST00000591028 NUP98P52948 1817 aa20.34■□□□□ 0.85
NFIX-213ENST00000591028 MAP3K15Q6ZN16 1313 aa20.34■□□□□ 0.85
NFIX-213ENST00000591028 VEGFAP15692 232 aaPredicted RBP20.34■□□□□ 0.85
NFIX-213ENST00000591028 ERFEQ4G0M1 354 aa20.34■□□□□ 0.85
NFIX-213ENST00000591028 STYK1Q6J9G0 422 aa20.34■□□□□ 0.85
NFIX-213ENST00000591028 KLRG1Q96E93 195 aa20.34■□□□□ 0.85
NFIX-213ENST00000591028 TAOK3Q9H2K8 898 aa20.34■□□□□ 0.85
NFIX-213ENST00000591028 FAM177BA6PVY3 158 aa20.33■□□□□ 0.85
NFIX-213ENST00000591028 SLC4A2P04920 1241 aa20.33■□□□□ 0.85
NFIX-213ENST00000591028 CNKSR1Q969H4 720 aa20.33■□□□□ 0.85
NFIX-213ENST00000591028 MASTLQ96GX5 879 aa20.33■□□□□ 0.85
NFIX-213ENST00000591028 KIF16BQ96L93 1317 aa20.32■□□□□ 0.84
NFIX-213ENST00000591028 LTBP3Q9NS15 1303 aa20.32■□□□□ 0.84
NFIX-213ENST00000591028 POTECB2RU33 542 aa20.32■□□□□ 0.84
NFIX-213ENST00000591028 COPS6Q7L5N1 327 aa20.32■□□□□ 0.84
NFIX-213ENST00000591028 LRP10Q7Z4F1 713 aa20.32■□□□□ 0.84
NFIX-213ENST00000591028 XAGE3Q8WTP9 111 aa20.32■□□□□ 0.84
NFIX-213ENST00000591028 NIP7Q9Y221 180 aaKnown RBP eCLIP20.32■□□□□ 0.84
NFIX-213ENST00000591028 HLFQ16534 295 aa20.31■□□□□ 0.84
NFIX-213ENST00000591028 PLBD2Q8NHP8 589 aa20.31■□□□□ 0.84
NFIX-213ENST00000591028 PTPRCP08575 1304 aa20.3■□□□□ 0.84
NFIX-213ENST00000591028 PROSER3Q2NL68 480 aa20.3■□□□□ 0.84
NFIX-213ENST00000591028 GIGYF2Q6Y7W6 1299 aaKnown RBP20.3■□□□□ 0.84
NFIX-213ENST00000591028 ANKRD13DQ6ZTN6 518 aa20.3■□□□□ 0.84
NFIX-213ENST00000591028 SMC4Q9NTJ3 1288 aa20.3■□□□□ 0.84
NFIX-213ENST00000591028 CACNA1FO60840 1977 aa20.29■□□□□ 0.84
NFIX-213ENST00000591028 BRPF1P55201 1214 aaPredicted RBP20.29■□□□□ 0.84
NFIX-213ENST00000591028 AIMP1Q12904 312 aaKnown RBP20.29■□□□□ 0.84
NFIX-213ENST00000591028 FLIIQ13045 1269 aa20.29■□□□□ 0.84
NFIX-213ENST00000591028 OLFM4Q6UX06 510 aa20.29■□□□□ 0.84
NFIX-213ENST00000591028 ABCC12Q96J65 1359 aa20.29■□□□□ 0.84
NFIX-213ENST00000591028 NEXNQ0ZGT2 675 aa20.28■□□□□ 0.84
NFIX-213ENST00000591028 DPY19L2Q6NUT2 758 aa20.28■□□□□ 0.84
NFIX-213ENST00000591028 RIC3Q7Z5B4 369 aa20.28■□□□□ 0.84
NFIX-213ENST00000591028 IPO8O15397 1037 aaKnown RBP20.27■□□□□ 0.84
NFIX-213ENST00000591028 DDNO94850 711 aaPredicted RBP20.27■□□□□ 0.84
NFIX-213ENST00000591028 ANXA1P04083 346 aa20.27■□□□□ 0.84
NFIX-213ENST00000591028 FKBP5Q13451 457 aaPredicted RBP20.27■□□□□ 0.84
NFIX-213ENST00000591028 PARP10Q53GL7 1025 aa20.27■□□□□ 0.84
NFIX-213ENST00000591028 JMYQ8N9B5 988 aa20.27■□□□□ 0.84
NFIX-213ENST00000591028 C7orf43Q8WVR3 580 aa20.27■□□□□ 0.84
NFIX-213ENST00000591028 RNF123Q5XPI4 1314 aa20.27■□□□□ 0.83
NFIX-213ENST00000591028 POTEIP0CG38 1075 aa20.26■□□□□ 0.83
NFIX-213ENST00000591028 POTEJP0CG39 1038 aa20.26■□□□□ 0.83
NFIX-213ENST00000591028 NPR1P16066 1061 aa20.26■□□□□ 0.83
NFIX-213ENST00000591028 RARSP54136 660 aaKnown RBP20.26■□□□□ 0.83
NFIX-213ENST00000591028 CCDC93Q567U6 631 aa20.26■□□□□ 0.83
NFIX-213ENST00000591028 SOGA3Q5TF21 947 aa20.26■□□□□ 0.83
NFIX-213ENST00000591028 KSR2Q6VAB6 950 aa20.26■□□□□ 0.83
NFIX-213ENST00000591028 TTLL7Q6ZT98 887 aa20.26■□□□□ 0.83
NFIX-213ENST00000591028 SSH1Q8WYL5 1049 aa20.26■□□□□ 0.83
NFIX-213ENST00000591028 ZBTB3Q9H5J0 574 aa20.26■□□□□ 0.83
NFIX-213ENST00000591028 IBTKQ9P2D0 1353 aaPredicted RBP20.25■□□□□ 0.83
NFIX-213ENST00000591028 TPTE2Q6XPS3 522 aa20.25■□□□□ 0.83
NFIX-213ENST00000591028 NYXQ9GZU5 481 aa20.25■□□□□ 0.83
NFIX-213ENST00000591028 SCN4AP35499 1836 aa20.25■□□□□ 0.83
NFIX-213ENST00000591028 KLRG2A4D1S0 409 aaPredicted RBP20.24■□□□□ 0.83
NFIX-213ENST00000591028 HSP90B1P14625 803 aaKnown RBP20.24■□□□□ 0.83
NFIX-213ENST00000591028 NUTM1Q86Y26 1132 aa20.24■□□□□ 0.83
NFIX-213ENST00000591028 MRPL50Q8N5N7 158 aaKnown RBP20.24■□□□□ 0.83
NFIX-213ENST00000591028 PHAXQ9H814 394 aaKnown RBP20.24■□□□□ 0.83
NFIX-213ENST00000591028 ZNF277Q9NRM2 450 aaPredicted RBP20.24■□□□□ 0.83
NFIX-213ENST00000591028 CENPBP07199 599 aaPredicted RBP20.23■□□□□ 0.83
NFIX-213ENST00000591028 TCIRG1Q13488 830 aa20.23■□□□□ 0.83
NFIX-213ENST00000591028 PPP1R42Q7Z4L9 355 aa20.23■□□□□ 0.83
NFIX-213ENST00000591028 ARHGAP45Q92619 1136 aa20.23■□□□□ 0.83
NFIX-213ENST00000591028 API5Q9BZZ5 524 aaKnown RBP20.23■□□□□ 0.83
NFIX-213ENST00000591028 ZNF541Q9H0D2 1346 aa20.23■□□□□ 0.83
NFIX-213ENST00000591028 TCERG1O14776 1098 aaKnown RBP20.22■□□□□ 0.83
NFIX-213ENST00000591028 GTF2E1P29083 439 aaPredicted RBP20.22■□□□□ 0.83
NFIX-213ENST00000591028 FKBP4Q02790 459 aaKnown RBP eCLIP20.22■□□□□ 0.83
NFIX-213ENST00000591028 TRIM28Q13263 835 aaKnown RBP20.22■□□□□ 0.83
NFIX-213ENST00000591028 UBN2Q6ZU65 1347 aa20.22■□□□□ 0.83
NFIX-213ENST00000591028 PI4KAP2A4QPH2 592 aa20.21■□□□□ 0.83
NFIX-213ENST00000591028 GPTP24298 496 aa20.21■□□□□ 0.83
NFIX-213ENST00000591028 PI4KAP1Q8N8J0 262 aa20.21■□□□□ 0.83
NFIX-213ENST00000591028 DNAAF4Q8WXU2 420 aa20.21■□□□□ 0.83
NFIX-213ENST00000591028 METTL22Q9BUU2 404 aaPredicted RBP20.21■□□□□ 0.83
NFIX-213ENST00000591028 ANKRD36CQ5JPF3 1778 aa20.21■□□□□ 0.83
NFIX-213ENST00000591028 SNED1Q8TER0 1413 aa20.2■□□□□ 0.82
NFIX-213ENST00000591028 MS4A1P11836 297 aa20.2■□□□□ 0.82
NFIX-213ENST00000591028 SLC51AQ86UW1 340 aa20.2■□□□□ 0.82
NFIX-213ENST00000591028 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.2■□□□□ 0.82
NFIX-213ENST00000591028 MAP3K2Q9Y2U5 619 aa20.2■□□□□ 0.82
NFIX-213ENST00000591028 COL4A5P29400 1685 aa20.19■□□□□ 0.82
NFIX-213ENST00000591028 COL13A1Q5TAT6 717 aaPredicted RBP20.19■□□□□ 0.82
NFIX-213ENST00000591028 CHADLQ6NUI6 762 aa20.19■□□□□ 0.82
NFIX-213ENST00000591028 ZNF34Q8IZ26 560 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms