RNA–Protein interactions for RNA: ENST00000590278.1

LRP3-203, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 3,278 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-203ENST00000590278 SPATA32Q96LK8 384 aa17.48■□□□□ 0.39
LRP3-203ENST00000590278 TLR7Q9NYK1 1049 aaKnown RBP17.48■□□□□ 0.39
LRP3-203ENST00000590278 TAOK2Q9UL54 1235 aa17.48■□□□□ 0.39
LRP3-203ENST00000590278 PPP4R3BQ5MIZ7 849 aa17.47■□□□□ 0.39
LRP3-203ENST00000590278 TTC41PQ6P2S7 1318 aa17.47■□□□□ 0.39
LRP3-203ENST00000590278 EVI5LQ96CN4 794 aa17.47■□□□□ 0.39
LRP3-203ENST00000590278 ZSWIM6Q9HCJ5 1215 aa17.47■□□□□ 0.39
LRP3-203ENST00000590278 TAF6LQ9Y6J9 622 aa17.47■□□□□ 0.39
LRP3-203ENST00000590278 ANO6Q4KMQ2 910 aa17.46■□□□□ 0.39
LRP3-203ENST00000590278 C16orf45Q96MC5 204 aaPredicted RBP17.46■□□□□ 0.39
LRP3-203ENST00000590278 KCNF1Q9H3M0 494 aa17.46■□□□□ 0.39
LRP3-203ENST00000590278 TYRO3Q06418 890 aa17.46■□□□□ 0.39
LRP3-203ENST00000590278 ST3GAL1Q11201 340 aa17.46■□□□□ 0.39
LRP3-203ENST00000590278 LARP1Q6PKG0 1096 aaKnown RBP17.46■□□□□ 0.39
LRP3-203ENST00000590278 CCDC186Q7Z3E2 898 aa17.46■□□□□ 0.39
LRP3-203ENST00000590278 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.46■□□□□ 0.39
LRP3-203ENST00000590278 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.46■□□□□ 0.39
LRP3-203ENST00000590278 A0A0D9SFI3 127 aa17.46■□□□□ 0.39
LRP3-203ENST00000590278 MYL6BP14649 208 aa17.46■□□□□ 0.39
LRP3-203ENST00000590278 LRMPQ12912 555 aa17.46■□□□□ 0.39
LRP3-203ENST00000590278 C1orf141Q5JVX7 400 aa17.46■□□□□ 0.39
LRP3-203ENST00000590278 ZNF592Q92610 1267 aa17.46■□□□□ 0.39
LRP3-203ENST00000590278 EAF2Q96CJ1 260 aaPredicted RBP17.46■□□□□ 0.39
LRP3-203ENST00000590278 DBF4Q9UBU7 674 aaPredicted RBP17.46■□□□□ 0.39
LRP3-203ENST00000590278 LRRC2Q9BYS8 371 aa17.45■□□□□ 0.38
LRP3-203ENST00000590278 RIOK3O14730 519 aaKnown RBP17.45■□□□□ 0.38
LRP3-203ENST00000590278 PSMA5P28066 241 aa17.45■□□□□ 0.38
LRP3-203ENST00000590278 CCDC94Q9BW85 323 aaPredicted RBP17.45■□□□□ 0.38
LRP3-203ENST00000590278 BCL2L12Q9HB09 334 aa17.45■□□□□ 0.38
LRP3-203ENST00000590278 H3BQV1 296 aa17.45■□□□□ 0.38
LRP3-203ENST00000590278 SLC27A2O14975 620 aa17.45■□□□□ 0.38
LRP3-203ENST00000590278 EPB41L2O43491 1005 aaKnown RBP17.45■□□□□ 0.38
LRP3-203ENST00000590278 IFFO2Q5TF58 517 aa17.45■□□□□ 0.38
LRP3-203ENST00000590278 RNF20Q5VTR2 975 aa17.45■□□□□ 0.38
LRP3-203ENST00000590278 ZNF710Q8N1W2 664 aa17.45■□□□□ 0.38
LRP3-203ENST00000590278 FAM200AQ8TCP9 573 aa17.45■□□□□ 0.38
LRP3-203ENST00000590278 PTPRUQ92729 1446 aa17.44■□□□□ 0.38
LRP3-203ENST00000590278 KCNA6P17658 529 aa17.44■□□□□ 0.38
LRP3-203ENST00000590278 BICC1Q9H694 974 aaKnown RBP17.44■□□□□ 0.38
LRP3-203ENST00000590278 NRBP1Q9UHY1 535 aa17.44■□□□□ 0.38
LRP3-203ENST00000590278 NECTIN1Q15223 517 aa17.44■□□□□ 0.38
LRP3-203ENST00000590278 RIC3Q7Z5B4 369 aa17.44■□□□□ 0.38
LRP3-203ENST00000590278 SUCLG2Q96I99 432 aa17.44■□□□□ 0.38
LRP3-203ENST00000590278 PIP4K2AP48426 406 aaPredicted RBP17.43■□□□□ 0.38
LRP3-203ENST00000590278 ERC1Q8IUD2 1116 aa17.43■□□□□ 0.38
LRP3-203ENST00000590278 KIAA1524Q8TCG1 905 aa17.43■□□□□ 0.38
LRP3-203ENST00000590278 DNAJC2Q99543 621 aaKnown RBP17.43■□□□□ 0.38
LRP3-203ENST00000590278 FUCA2Q9BTY2 467 aa17.43■□□□□ 0.38
LRP3-203ENST00000590278 JAK2O60674 1132 aa17.43■□□□□ 0.38
LRP3-203ENST00000590278 PDCP20941 246 aa17.43■□□□□ 0.38
LRP3-203ENST00000590278 DNAJC25Q9H1X3 360 aa17.43■□□□□ 0.38
LRP3-203ENST00000590278 ADCY9O60503 1353 aa17.42■□□□□ 0.38
LRP3-203ENST00000590278 PSME1Q06323 249 aa17.42■□□□□ 0.38
LRP3-203ENST00000590278 PDCL2Q8N4E4 241 aa17.42■□□□□ 0.38
LRP3-203ENST00000590278 ZNF589Q86UQ0 364 aaPredicted RBP17.42■□□□□ 0.38
LRP3-203ENST00000590278 MRVI1Q9Y6F6 885 aa17.42■□□□□ 0.38
LRP3-203ENST00000590278 IGSF3O75054 1194 aa17.41■□□□□ 0.38
LRP3-203ENST00000590278 CHGBP05060 677 aa17.41■□□□□ 0.38
LRP3-203ENST00000590278 IL17RAQ96F46 866 aa17.41■□□□□ 0.38
LRP3-203ENST00000590278 CBX8Q9HC52 389 aa17.41■□□□□ 0.38
LRP3-203ENST00000590278 SASH1O94885 1247 aa17.41■□□□□ 0.38
LRP3-203ENST00000590278 KSR2Q6VAB6 950 aa17.41■□□□□ 0.38
LRP3-203ENST00000590278 CCDC129Q6ZRS4 1044 aa17.41■□□□□ 0.38
LRP3-203ENST00000590278 GRM8O00222 908 aa17.4■□□□□ 0.38
LRP3-203ENST00000590278 NR1I2O75469 434 aa17.4■□□□□ 0.38
LRP3-203ENST00000590278 ESCO1Q5FWF5 840 aa17.4■□□□□ 0.38
LRP3-203ENST00000590278 A0A087WWV3 80 aa17.4■□□□□ 0.38
LRP3-203ENST00000590278 ZNF165P49910 485 aa17.4■□□□□ 0.38
LRP3-203ENST00000590278 SLC39A6Q13433 755 aa17.4■□□□□ 0.38
LRP3-203ENST00000590278 PLEKHO1Q53GL0 409 aaPredicted RBP17.4■□□□□ 0.38
LRP3-203ENST00000590278 TM6SF1Q9BZW5 370 aa17.4■□□□□ 0.38
LRP3-203ENST00000590278 RGPD1P0DJD0 1748 aa17.39■□□□□ 0.38
LRP3-203ENST00000590278 MAP4K1Q92918 833 aa17.39■□□□□ 0.38
LRP3-203ENST00000590278 SCAND2PQ9GZW5 306 aaPredicted RBP17.39■□□□□ 0.38
LRP3-203ENST00000590278 BABAM1Q9NWV8 329 aa17.39■□□□□ 0.38
LRP3-203ENST00000590278 AGLP35573 1532 aa17.39■□□□□ 0.37
LRP3-203ENST00000590278 U2AF2P26368 475 aaKnown RBP eCLIP17.39■□□□□ 0.37
LRP3-203ENST00000590278 PLEKHG1Q9ULL1 1385 aa17.39■□□□□ 0.37
LRP3-203ENST00000590278 LEO1Q8WVC0 666 aaPredicted RBP17.39■□□□□ 0.37
LRP3-203ENST00000590278 SPTLC3Q9NUV7 552 aa17.39■□□□□ 0.37
LRP3-203ENST00000590278 XRN1Q8IZH2 1706 aaKnown RBP17.39■□□□□ 0.37
LRP3-203ENST00000590278 GOLGA6L19H0YKK7 550 aa17.38■□□□□ 0.37
LRP3-203ENST00000590278 BRF1Q92994 677 aa17.38■□□□□ 0.37
LRP3-203ENST00000590278 CHMP4AQ9BY43 222 aa17.38■□□□□ 0.37
LRP3-203ENST00000590278 PHF8Q9UPP1 1060 aa17.38■□□□□ 0.37
LRP3-203ENST00000590278 HIP1O00291 1037 aa17.38■□□□□ 0.37
LRP3-203ENST00000590278 TPM3P06753 285 aa17.38■□□□□ 0.37
LRP3-203ENST00000590278 RPS6KB1P23443 525 aa17.38■□□□□ 0.37
LRP3-203ENST00000590278 ATP2B3Q16720 1220 aa17.38■□□□□ 0.37
LRP3-203ENST00000590278 TPD52L1Q16890 204 aaPredicted RBP17.38■□□□□ 0.37
LRP3-203ENST00000590278 SEC62Q99442 399 aaKnown RBP17.38■□□□□ 0.37
LRP3-203ENST00000590278 DDX58O95786 925 aaKnown RBP17.38■□□□□ 0.37
LRP3-203ENST00000590278 ANKRD1Q15327 319 aa17.38■□□□□ 0.37
LRP3-203ENST00000590278 CLIP2Q9UDT6 1046 aa17.38■□□□□ 0.37
LRP3-203ENST00000590278 FAM208AQ9UK61 1670 aaKnown RBP17.37■□□□□ 0.37
LRP3-203ENST00000590278 GUCY1B3Q02153 619 aa17.37■□□□□ 0.37
LRP3-203ENST00000590278 IP6K1Q92551 441 aa17.37■□□□□ 0.37
LRP3-203ENST00000590278 PXDNLA1KZ92 1463 aa17.37■□□□□ 0.37
LRP3-203ENST00000590278 GIGYF1O75420 1035 aaPredicted RBP17.37■□□□□ 0.37
LRP3-203ENST00000590278 ERCC4Q92889 916 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms