RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 SLC10A5Q5PT55 438 aa23.93■■□□□ 1.42
MBD1-223ENST00000590215 NUTM1Q86Y26 1132 aa23.93■■□□□ 1.42
MBD1-223ENST00000590215 CCDC191Q8NCU4 936 aa23.93■■□□□ 1.42
MBD1-223ENST00000590215 N4BP2Q86UW6 1770 aaPredicted RBP23.93■■□□□ 1.42
MBD1-223ENST00000590215 ABCC12Q96J65 1359 aa23.92■■□□□ 1.42
MBD1-223ENST00000590215 IGKV5-2P06315 115 aa23.92■■□□□ 1.42
MBD1-223ENST00000590215 GTF2E1P29083 439 aaPredicted RBP23.92■■□□□ 1.42
MBD1-223ENST00000590215 CHRNA5P30532 468 aa23.92■■□□□ 1.42
MBD1-223ENST00000590215 RARSP54136 660 aaKnown RBP23.92■■□□□ 1.42
MBD1-223ENST00000590215 DNAAF4Q8WXU2 420 aa23.92■■□□□ 1.42
MBD1-223ENST00000590215 TRMT112Q9UI30 125 aaKnown RBP23.91■■□□□ 1.42
MBD1-223ENST00000590215 H0YIN7 160 aa23.9■■□□□ 1.42
MBD1-223ENST00000590215 NEXNQ0ZGT2 675 aa23.9■■□□□ 1.42
MBD1-223ENST00000590215 C2CD5Q86YS7 1000 aa23.9■■□□□ 1.42
MBD1-223ENST00000590215 PIM2Q9P1W9 311 aa23.9■■□□□ 1.42
MBD1-223ENST00000590215 BRCA1P38398 1863 aaKnown RBP23.9■■□□□ 1.42
MBD1-223ENST00000590215 PTPRCP08575 1304 aa23.89■■□□□ 1.42
MBD1-223ENST00000590215 SH3TC1Q8TE82 1336 aa23.89■■□□□ 1.42
MBD1-223ENST00000590215 SRGNP10124 158 aa23.89■■□□□ 1.41
MBD1-223ENST00000590215 BCL2L13Q9BXK5 485 aa23.89■■□□□ 1.41
MBD1-223ENST00000590215 SMC4Q9NTJ3 1288 aa23.89■■□□□ 1.41
MBD1-223ENST00000590215 CRY2Q49AN0 593 aa23.88■■□□□ 1.41
MBD1-223ENST00000590215 ZBTB38Q8NAP3 1195 aaPredicted RBP23.88■■□□□ 1.41
MBD1-223ENST00000590215 CWC25Q9NXE8 425 aaPredicted RBP23.88■■□□□ 1.41
MBD1-223ENST00000590215 DLEC1Q9Y238 1755 aa23.88■■□□□ 1.41
MBD1-223ENST00000590215 GOLGB1Q14789 3259 aaKnown RBP23.88■■□□□ 1.41
MBD1-223ENST00000590215 NEURL1BA8MQ27 555 aa23.87■■□□□ 1.41
MBD1-223ENST00000590215 F6X3S4 739 aa23.87■■□□□ 1.41
MBD1-223ENST00000590215 YBX3P16989 372 aaKnown RBP eCLIP23.87■■□□□ 1.41
MBD1-223ENST00000590215 SYNE4Q8N205 404 aa23.87■■□□□ 1.41
MBD1-223ENST00000590215 LINS1Q8NG48 757 aa23.87■■□□□ 1.41
MBD1-223ENST00000590215 DCAF8L1A6NGE4 600 aa23.86■■□□□ 1.41
MBD1-223ENST00000590215 PCCAP05165 728 aaPredicted RBP23.86■■□□□ 1.41
MBD1-223ENST00000590215 GPR162Q16538 588 aa23.86■■□□□ 1.41
MBD1-223ENST00000590215 BEND3Q5T5X7 828 aa23.86■■□□□ 1.41
MBD1-223ENST00000590215 STYK1Q6J9G0 422 aa23.86■■□□□ 1.41
MBD1-223ENST00000590215 FAM89AQ96GI7 184 aa23.86■■□□□ 1.41
MBD1-223ENST00000590215 MASTLQ96GX5 879 aa23.86■■□□□ 1.41
MBD1-223ENST00000590215 COL11A2P13942 1736 aaPredicted RBP23.85■■□□□ 1.41
MBD1-223ENST00000590215 CWF19L2Q2TBE0 894 aaKnown RBP23.85■■□□□ 1.41
MBD1-223ENST00000590215 DALRD3Q5D0E6 543 aaKnown RBP23.85■■□□□ 1.41
MBD1-223ENST00000590215 TNRC6CQ9HCJ0 1690 aaKnown RBP23.85■■□□□ 1.41
MBD1-223ENST00000590215 NPR1P16066 1061 aa23.84■■□□□ 1.41
MBD1-223ENST00000590215 TTLL6Q8N841 843 aa23.84■■□□□ 1.41
MBD1-223ENST00000590215 NLRP3Q96P20 1036 aa23.84■■□□□ 1.41
MBD1-223ENST00000590215 GRIN3BO60391 1043 aa23.83■■□□□ 1.41
MBD1-223ENST00000590215 HCLS1P14317 486 aaPredicted RBP23.83■■□□□ 1.41
MBD1-223ENST00000590215 HOXA10P31260 410 aaPredicted RBP23.83■■□□□ 1.41
MBD1-223ENST00000590215 GCKRQ14397 625 aa23.83■■□□□ 1.41
MBD1-223ENST00000590215 C3orf67Q6ZVT6 689 aa23.83■■□□□ 1.41
MBD1-223ENST00000590215 BCS1LQ9Y276 419 aa23.83■■□□□ 1.41
MBD1-223ENST00000590215 PELP1Q8IZL8 1130 aaKnown RBP23.82■■□□□ 1.4
MBD1-223ENST00000590215 CNKSR1Q969H4 720 aa23.82■■□□□ 1.4
MBD1-223ENST00000590215 ZNF622Q969S3 477 aaKnown RBP eCLIP23.82■■□□□ 1.42e-8■■□□□ 13.9
MBD1-223ENST00000590215 WWC3Q9ULE0 1092 aa23.82■■□□□ 1.4
MBD1-223ENST00000590215 H7C1W4 665 aa23.81■■□□□ 1.4
MBD1-223ENST00000590215 IRS4O14654 1257 aaPredicted RBP23.81■■□□□ 1.4
MBD1-223ENST00000590215 ALDH1L1O75891 902 aa23.81■■□□□ 1.4
MBD1-223ENST00000590215 ARHGAP45Q92619 1136 aa23.81■■□□□ 1.4
MBD1-223ENST00000590215 NOB1Q9ULX3 412 aaKnown RBP23.81■■□□□ 1.4
MBD1-223ENST00000590215 KIF16BQ96L93 1317 aa23.81■■□□□ 1.4
MBD1-223ENST00000590215 CDHR2Q9BYE9 1310 aa23.81■■□□□ 1.4
MBD1-223ENST00000590215 UTRNP46939 3433 aa23.81■■□□□ 1.4
MBD1-223ENST00000590215 HSP90B1P14625 803 aaKnown RBP23.8■■□□□ 1.4
MBD1-223ENST00000590215 BCAR3O75815 825 aa23.79■■□□□ 1.4
MBD1-223ENST00000590215 SF3B3Q15393 1217 aaKnown RBP23.79■■□□□ 1.4
MBD1-223ENST00000590215 SRCIN1Q9C0H9 1055 aa23.79■■□□□ 1.4
MBD1-223ENST00000590215 ARFGEF1Q9Y6D6 1849 aa23.79■■□□□ 1.4
MBD1-223ENST00000590215 DDX60Q8IY21 1712 aaKnown RBP23.79■■□□□ 1.4
MBD1-223ENST00000590215 ALDH1B1P30837 517 aa23.78■■□□□ 1.4
MBD1-223ENST00000590215 CASP7P55210 303 aa23.78■■□□□ 1.4
MBD1-223ENST00000590215 RTL5Q5HYW3 569 aaPredicted RBP23.78■■□□□ 1.4
MBD1-223ENST00000590215 SLC4A10Q6U841 1118 aa23.78■■□□□ 1.4
MBD1-223ENST00000590215 CRAMP1Q96RY5 1269 aa23.78■■□□□ 1.4
MBD1-223ENST00000590215 API5Q9BZZ5 524 aaKnown RBP23.78■■□□□ 1.4
MBD1-223ENST00000590215 PRPF40BQ6NWY9 871 aaKnown RBP23.77■■□□□ 1.4
MBD1-223ENST00000590215 RPGRQ92834 1020 aaKnown RBP23.77■■□□□ 1.4
MBD1-223ENST00000590215 LAMB2P55268 1798 aa23.76■■□□□ 1.39
MBD1-223ENST00000590215 C7orf43Q8WVR3 580 aa23.76■■□□□ 1.39
MBD1-223ENST00000590215 JARID2Q92833 1246 aaPredicted RBP23.76■■□□□ 1.39
MBD1-223ENST00000590215 RBM17Q96I25 401 aaKnown RBP23.76■■□□□ 1.39
MBD1-223ENST00000590215 PLA2G12BQ9BX93 195 aa23.76■■□□□ 1.39
MBD1-223ENST00000590215 IPO8O15397 1037 aaKnown RBP23.75■■□□□ 1.39
MBD1-223ENST00000590215 PDE8AO60658 829 aa23.75■■□□□ 1.39
MBD1-223ENST00000590215 UBE3BQ7Z3V4 1068 aa23.75■■□□□ 1.39
MBD1-223ENST00000590215 SLX4Q8IY92 1834 aa23.75■■□□□ 1.39
MBD1-223ENST00000590215 GRM8O00222 908 aa23.73■■□□□ 1.39
MBD1-223ENST00000590215 YTHDC1Q96MU7 727 aaKnown RBP23.73■■□□□ 1.39
MBD1-223ENST00000590215 UTYO14607 1347 aa23.73■■□□□ 1.39
MBD1-223ENST00000590215 ATF7IPQ6VMQ6 1270 aa23.72■■□□□ 1.39
MBD1-223ENST00000590215 ABCC4O15439 1325 aa23.72■■□□□ 1.39
MBD1-223ENST00000590215 TRIM27P14373 513 aa23.71■■□□□ 1.39
MBD1-223ENST00000590215 CCT4P50991 539 aaKnown RBP23.71■■□□□ 1.39
MBD1-223ENST00000590215 DDX46Q7L014 1031 aaKnown RBP23.71■■□□□ 1.39
MBD1-223ENST00000590215 C21orf2O43822 256 aa23.7■■□□□ 1.38
MBD1-223ENST00000590215 CTSWP56202 376 aa23.7■■□□□ 1.38
MBD1-223ENST00000590215 SOGA3Q5TF21 947 aa23.7■■□□□ 1.38
MBD1-223ENST00000590215 TTLL11Q8NHH1 800 aa23.7■■□□□ 1.38
MBD1-223ENST00000590215 C9orf78Q9NZ63 289 aaPredicted RBP23.7■■□□□ 1.38
MBD1-223ENST00000590215 BBOX1O75936 387 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms