RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 LMNB1P20700 586 aa15.56■□□□□ 0.08
TPM4-212ENST00000590180 SLC10A5Q5PT55 438 aa15.56■□□□□ 0.08
TPM4-212ENST00000590180 SOGA3Q5TF21 947 aa15.56■□□□□ 0.08
TPM4-212ENST00000590180 RBM17Q96I25 401 aaKnown RBP15.56■□□□□ 0.08
TPM4-212ENST00000590180 STK31Q9BXU1 1019 aa15.56■□□□□ 0.08
TPM4-212ENST00000590180 ADCY9O60503 1353 aa15.56■□□□□ 0.08
TPM4-212ENST00000590180 ABCC12Q96J65 1359 aa15.56■□□□□ 0.08
TPM4-212ENST00000590180 ARFGEF1Q9Y6D6 1849 aa15.55■□□□□ 0.08
TPM4-212ENST00000590180 NFKBIEO00221 500 aa15.55■□□□□ 0.08
TPM4-212ENST00000590180 HCLS1P14317 486 aaPredicted RBP15.55■□□□□ 0.08
TPM4-212ENST00000590180 SYNE4Q8N205 404 aa15.55■□□□□ 0.08
TPM4-212ENST00000590180 IBTKQ9P2D0 1353 aaPredicted RBP15.54■□□□□ 0.08
TPM4-212ENST00000590180 DDX58O95786 925 aaKnown RBP15.54■□□□□ 0.08
TPM4-212ENST00000590180 CRY2Q49AN0 593 aa15.54■□□□□ 0.08
TPM4-212ENST00000590180 C7orf43Q8WVR3 580 aa15.54■□□□□ 0.08
TPM4-212ENST00000590180 ISCA1Q9BUE6 129 aa15.54■□□□□ 0.08
TPM4-212ENST00000590180 TAOK3Q9H2K8 898 aa15.54■□□□□ 0.08
TPM4-212ENST00000590180 SH3TC1Q8TE82 1336 aa15.53■□□□□ 0.08
TPM4-212ENST00000590180 FANCIQ9NVI1 1328 aa15.53■□□□□ 0.08
TPM4-212ENST00000590180 SLC4A2P04920 1241 aa15.53■□□□□ 0.08
TPM4-212ENST00000590180 HOXA10P31260 410 aaPredicted RBP15.53■□□□□ 0.08
TPM4-212ENST00000590180 PRELPP51888 382 aa15.53■□□□□ 0.08
TPM4-212ENST00000590180 C1QTNF8P60827 252 aa15.53■□□□□ 0.08
TPM4-212ENST00000590180 EXOSC9Q06265 439 aaKnown RBP15.53■□□□□ 0.08
TPM4-212ENST00000590180 CCDC93Q567U6 631 aa15.53■□□□□ 0.08
TPM4-212ENST00000590180 C3orf67Q6ZVT6 689 aa15.53■□□□□ 0.08
TPM4-212ENST00000590180 MYD88Q99836 296 aa15.53■□□□□ 0.08
TPM4-212ENST00000590180 RTL5Q5HYW3 569 aaPredicted RBP15.52■□□□□ 0.08
TPM4-212ENST00000590180 OLFM4Q6UX06 510 aa15.52■□□□□ 0.08
TPM4-212ENST00000590180 FAM89AQ96GI7 184 aa15.52■□□□□ 0.08
TPM4-212ENST00000590180 CRAMP1Q96RY5 1269 aa15.52■□□□□ 0.08
TPM4-212ENST00000590180 MYH16Q9H6N6 1097 aa15.52■□□□□ 0.08
TPM4-212ENST00000590180 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.08
TPM4-212ENST00000590180 SLX4Q8IY92 1834 aa15.52■□□□□ 0.07
TPM4-212ENST00000590180 RNF123Q5XPI4 1314 aa15.51■□□□□ 0.07
TPM4-212ENST00000590180 CCER2I3L3R5 266 aa15.51■□□□□ 0.07
TPM4-212ENST00000590180 VAMP4O75379 141 aa15.51■□□□□ 0.07
TPM4-212ENST00000590180 TRIM28Q13263 835 aaKnown RBP15.51■□□□□ 0.07
TPM4-212ENST00000590180 RTKN2Q8IZC4 609 aa15.51■□□□□ 0.07
TPM4-212ENST00000590180 TMX4Q9H1E5 349 aaPredicted RBP15.51■□□□□ 0.07
TPM4-212ENST00000590180 KDM2BQ8NHM5 1336 aa15.5■□□□□ 0.07
TPM4-212ENST00000590180 DLEC1Q9Y238 1755 aa15.5■□□□□ 0.07
TPM4-212ENST00000590180 KSR2Q6VAB6 950 aa15.5■□□□□ 0.07
TPM4-212ENST00000590180 G2E3Q7L622 706 aa15.5■□□□□ 0.07
TPM4-212ENST00000590180 NMRK2Q9NPI5 230 aa15.5■□□□□ 0.07
TPM4-212ENST00000590180 MAP3K2Q9Y2U5 619 aa15.5■□□□□ 0.07
TPM4-212ENST00000590180 COL11A2P13942 1736 aaPredicted RBP15.49■□□□□ 0.07
TPM4-212ENST00000590180 PI4KAP2A4QPH2 592 aa15.49■□□□□ 0.07
TPM4-212ENST00000590180 KIF3CO14782 793 aa15.49■□□□□ 0.07
TPM4-212ENST00000590180 FKBP4Q02790 459 aaKnown RBP eCLIP15.49■□□□□ 0.07
TPM4-212ENST00000590180 CC2D2BQ6DHV5 1058 aa15.49■□□□□ 0.07
TPM4-212ENST00000590180 DPY19L2Q6NUT2 758 aa15.49■□□□□ 0.07
TPM4-212ENST00000590180 DDX46Q7L014 1031 aaKnown RBP15.49■□□□□ 0.07
TPM4-212ENST00000590180 PI4KAP1Q8N8J0 262 aa15.49■□□□□ 0.07
TPM4-212ENST00000590180 METTL22Q9BUU2 404 aaPredicted RBP15.49■□□□□ 0.07
TPM4-212ENST00000590180 RRAGCQ9HB90 399 aa15.49■□□□□ 0.07
TPM4-212ENST00000590180 LTBP3Q9NS15 1303 aa15.48■□□□□ 0.07
TPM4-212ENST00000590180 IRS4O14654 1257 aaPredicted RBP15.48■□□□□ 0.07
TPM4-212ENST00000590180 PPEF1O14829 653 aaPredicted RBP15.48■□□□□ 0.07
TPM4-212ENST00000590180 C16orf71Q8IYS4 520 aaPredicted RBP15.48■□□□□ 0.07
TPM4-212ENST00000590180 CCDC191Q8NCU4 936 aa15.48■□□□□ 0.07
TPM4-212ENST00000590180 JARID2Q92833 1246 aaPredicted RBP15.48■□□□□ 0.07
TPM4-212ENST00000590180 ZNF277Q9NRM2 450 aaPredicted RBP15.48■□□□□ 0.07
TPM4-212ENST00000590180 ZC3H4Q9UPT8 1303 aaKnown RBP15.47■□□□□ 0.07
TPM4-212ENST00000590180 GLTPD2A6NH11 291 aa15.47■□□□□ 0.07
TPM4-212ENST00000590180 BBOX1O75936 387 aa15.47■□□□□ 0.07
TPM4-212ENST00000590180 SBF1O95248 1867 aa15.47■□□□□ 0.07
TPM4-212ENST00000590180 NEXNQ0ZGT2 675 aa15.47■□□□□ 0.07
TPM4-212ENST00000590180 RIC1Q4ADV7 1423 aa15.47■□□□□ 0.07
TPM4-212ENST00000590180 DIEXFQ68CQ4 756 aaKnown RBP15.47■□□□□ 0.07
TPM4-212ENST00000590180 ZBTB38Q8NAP3 1195 aaPredicted RBP15.47■□□□□ 0.07
TPM4-212ENST00000590180 CWC25Q9NXE8 425 aaPredicted RBP15.47■□□□□ 0.07
TPM4-212ENST00000590180 HSP90B1P14625 803 aaKnown RBP15.46■□□□□ 0.07
TPM4-212ENST00000590180 FLIIQ13045 1269 aa15.46■□□□□ 0.07
TPM4-212ENST00000590180 FKBP5Q13451 457 aaPredicted RBP15.46■□□□□ 0.07
TPM4-212ENST00000590180 ABCC4O15439 1325 aa15.45■□□□□ 0.06
TPM4-212ENST00000590180 SF3B3Q15393 1217 aaKnown RBP15.45■□□□□ 0.06
TPM4-212ENST00000590180 GRIPAP1Q4V328 841 aa15.45■□□□□ 0.06
TPM4-212ENST00000590180 ATP6V0A2Q9Y487 856 aa15.45■□□□□ 0.06
TPM4-212ENST00000590180 TNRC6CQ9HCJ0 1690 aaKnown RBP15.44■□□□□ 0.06
TPM4-212ENST00000590180 CACNA1SQ13698 1873 aa15.44■□□□□ 0.06
TPM4-212ENST00000590180 PCCAP05165 728 aaPredicted RBP15.44■□□□□ 0.06
TPM4-212ENST00000590180 IARSP41252 1262 aaKnown RBP15.44■□□□□ 0.06
TPM4-212ENST00000590180 GRAPQ13588 217 aa15.44■□□□□ 0.06
TPM4-212ENST00000590180 SP8Q8IXZ3 490 aa15.44■□□□□ 0.06
TPM4-212ENST00000590180 GRAPLQ8TC17 118 aaPredicted RBP15.44■□□□□ 0.06
TPM4-212ENST00000590180 PSMD1Q99460 953 aa15.44■□□□□ 0.06
TPM4-212ENST00000590180 CCDC88AQ3V6T2 1871 aa15.44■□□□□ 0.06
TPM4-212ENST00000590180 ZNF521Q96K83 1311 aa15.43■□□□□ 0.06
TPM4-212ENST00000590180 TOMM70O94826 608 aa15.43■□□□□ 0.06
TPM4-212ENST00000590180 IGKV5-2P06315 115 aa15.43■□□□□ 0.06
TPM4-212ENST00000590180 VEGFAP15692 232 aaPredicted RBP15.43■□□□□ 0.06
TPM4-212ENST00000590180 SLC51AQ86UW1 340 aa15.43■□□□□ 0.06
TPM4-212ENST00000590180 MIER1Q8N108 512 aa15.43■□□□□ 0.06
TPM4-212ENST00000590180 JDP2Q8WYK2 163 aa15.43■□□□□ 0.06
TPM4-212ENST00000590180 FER1L6Q2WGJ9 1857 aa15.42■□□□□ 0.06
TPM4-212ENST00000590180 E9PSI1 815 aa15.42■□□□□ 0.06
TPM4-212ENST00000590180 PDE8AO60658 829 aa15.42■□□□□ 0.06
TPM4-212ENST00000590180 DDNO94850 711 aaPredicted RBP15.42■□□□□ 0.06
TPM4-212ENST00000590180 CWF19L2Q2TBE0 894 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms