RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 CHPF2Q9P2E5 772 aa16.58■□□□□ 0.24
RFX1-207ENST00000589937 ZNF541Q9H0D2 1346 aa16.58■□□□□ 0.24
RFX1-207ENST00000589937 SCN4AP35499 1836 aa16.58■□□□□ 0.24
RFX1-207ENST00000589937 APAF1O14727 1248 aa16.57■□□□□ 0.24
RFX1-207ENST00000589937 SYNE4Q8N205 404 aa16.57■□□□□ 0.24
RFX1-207ENST00000589937 LTBP1Q14766 1721 aa16.56■□□□□ 0.24
RFX1-207ENST00000589937 DDNO94850 711 aaPredicted RBP16.56■□□□□ 0.24
RFX1-207ENST00000589937 APLP1P51693 650 aa16.56■□□□□ 0.24
RFX1-207ENST00000589937 COPS6Q7L5N1 327 aa16.56■□□□□ 0.24
RFX1-207ENST00000589937 MBIPQ9NS73 344 aa16.56■□□□□ 0.24
RFX1-207ENST00000589937 PCNTO95613 3336 aa16.55■□□□□ 0.24
RFX1-207ENST00000589937 TCERG1O14776 1098 aaKnown RBP16.55■□□□□ 0.24
RFX1-207ENST00000589937 POTEIP0CG38 1075 aa16.55■□□□□ 0.24
RFX1-207ENST00000589937 POTEJP0CG39 1038 aa16.55■□□□□ 0.24
RFX1-207ENST00000589937 FKBP4Q02790 459 aaKnown RBP eCLIP16.55■□□□□ 0.24
RFX1-207ENST00000589937 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
RFX1-207ENST00000589937 HDGFL1Q5TGJ6 251 aa16.55■□□□□ 0.24
RFX1-207ENST00000589937 ADAMTSL1Q8N6G6 1762 aa16.55■□□□□ 0.24
RFX1-207ENST00000589937 LRRC37AA6NMS7 1700 aa16.55■□□□□ 0.24
RFX1-207ENST00000589937 VEGFAP15692 232 aaPredicted RBP16.54■□□□□ 0.24
RFX1-207ENST00000589937 FSTL1Q12841 308 aa16.54■□□□□ 0.24
RFX1-207ENST00000589937 RPGRQ92834 1020 aaKnown RBP16.54■□□□□ 0.24
RFX1-207ENST00000589937 DDX21Q9NR30 783 aaKnown RBP eCLIP16.54■□□□□ 0.24
RFX1-207ENST00000589937 NLRP10Q86W26 655 aa16.53■□□□□ 0.24
RFX1-207ENST00000589937 DNAJC5GQ8N7S2 189 aa16.53■□□□□ 0.24
RFX1-207ENST00000589937 SMC1BQ8NDV3 1235 aa16.53■□□□□ 0.24
RFX1-207ENST00000589937 DUOX1Q9NRD9 1551 aa16.52■□□□□ 0.24
RFX1-207ENST00000589937 ZNF853P0CG23 659 aa16.52■□□□□ 0.24
RFX1-207ENST00000589937 HCLS1P14317 486 aaPredicted RBP16.52■□□□□ 0.24
RFX1-207ENST00000589937 HOXA10P31260 410 aaPredicted RBP16.52■□□□□ 0.24
RFX1-207ENST00000589937 PARP10Q53GL7 1025 aa16.52■□□□□ 0.24
RFX1-207ENST00000589937 DUSP27Q5VZP5 1158 aa16.52■□□□□ 0.24
RFX1-207ENST00000589937 PPP1R42Q7Z4L9 355 aa16.52■□□□□ 0.24
RFX1-207ENST00000589937 CFAP44Q96MT7 982 aa16.52■□□□□ 0.24
RFX1-207ENST00000589937 UTP14AQ9BVJ6 771 aaKnown RBP16.52■□□□□ 0.24
RFX1-207ENST00000589937 SPEF2Q9C093 1822 aa16.52■□□□□ 0.23
RFX1-207ENST00000589937 ABCC4O15439 1325 aa16.51■□□□□ 0.23
RFX1-207ENST00000589937 PPEF1O14829 653 aaPredicted RBP16.51■□□□□ 0.23
RFX1-207ENST00000589937 ALDH1B1P30837 517 aa16.51■□□□□ 0.23
RFX1-207ENST00000589937 IARSP41252 1262 aaKnown RBP16.51■□□□□ 0.23
RFX1-207ENST00000589937 DPY19L2Q6NUT2 758 aa16.51■□□□□ 0.23
RFX1-207ENST00000589937 ELL2O00472 640 aaPredicted RBP16.5■□□□□ 0.23
RFX1-207ENST00000589937 RTKN2Q8IZC4 609 aa16.5■□□□□ 0.23
RFX1-207ENST00000589937 ATP5J2-PTCD1G3V325 749 aa16.49■□□□□ 0.23
RFX1-207ENST00000589937 TCIRG1Q13488 830 aa16.49■□□□□ 0.23
RFX1-207ENST00000589937 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
RFX1-207ENST00000589937 HOXB7P09629 217 aa16.48■□□□□ 0.23
RFX1-207ENST00000589937 C8orf58Q8NAV2 365 aa16.48■□□□□ 0.23
RFX1-207ENST00000589937 CRAMP1Q96RY5 1269 aa16.48■□□□□ 0.23
RFX1-207ENST00000589937 PSMD1Q99460 953 aa16.48■□□□□ 0.23
RFX1-207ENST00000589937 IFT57Q9NWB7 429 aa16.48■□□□□ 0.23
RFX1-207ENST00000589937 RNF123Q5XPI4 1314 aa16.47■□□□□ 0.23
RFX1-207ENST00000589937 RTL5Q5HYW3 569 aaPredicted RBP16.47■□□□□ 0.23
RFX1-207ENST00000589937 SLC10A5Q5PT55 438 aa16.47■□□□□ 0.23
RFX1-207ENST00000589937 PLBD2Q8NHP8 589 aa16.47■□□□□ 0.23
RFX1-207ENST00000589937 TSR2Q969E8 191 aaKnown RBP16.47■□□□□ 0.23
RFX1-207ENST00000589937 L3MBTL3Q96JM7 780 aaPredicted RBP16.47■□□□□ 0.23
RFX1-207ENST00000589937 NLRP3Q96P20 1036 aa16.47■□□□□ 0.23
RFX1-207ENST00000589937 PHAXQ9H814 394 aaKnown RBP16.47■□□□□ 0.23
RFX1-207ENST00000589937 TRMT112Q9UI30 125 aaKnown RBP16.47■□□□□ 0.23
RFX1-207ENST00000589937 MYH3P11055 1940 aa16.47■□□□□ 0.23
RFX1-207ENST00000589937 FZD9O00144 591 aa16.46■□□□□ 0.23
RFX1-207ENST00000589937 HSP90AB3PQ58FF7 597 aa16.46■□□□□ 0.23
RFX1-207ENST00000589937 TSPYL6Q8N831 410 aa16.46■□□□□ 0.23
RFX1-207ENST00000589937 DBF4Q9UBU7 674 aaPredicted RBP16.46■□□□□ 0.23
RFX1-207ENST00000589937 SH3TC1Q8TE82 1336 aa16.45■□□□□ 0.22
RFX1-207ENST00000589937 GNAI1P63096 354 aa16.45■□□□□ 0.22
RFX1-207ENST00000589937 KLRG1Q96E93 195 aa16.45■□□□□ 0.22
RFX1-207ENST00000589937 FAM89AQ96GI7 184 aa16.45■□□□□ 0.22
RFX1-207ENST00000589937 ISCA1Q9BUE6 129 aa16.45■□□□□ 0.22
RFX1-207ENST00000589937 TAF1DQ9H5J8 278 aaPredicted RBP16.45■□□□□ 0.22
RFX1-207ENST00000589937 AOC3Q16853 763 aa16.44■□□□□ 0.22
RFX1-207ENST00000589937 ANKRD13DQ6ZTN6 518 aa16.44■□□□□ 0.22
RFX1-207ENST00000589937 HYPKQ9NX55 129 aa16.44■□□□□ 0.22
RFX1-207ENST00000589937 ATP6V0A2Q9Y487 856 aa16.44■□□□□ 0.22
RFX1-207ENST00000589937 EAPPQ56P03 285 aaPredicted RBP16.43■□□□□ 0.22
RFX1-207ENST00000589937 CHADLQ6NUI6 762 aa16.43■□□□□ 0.22
RFX1-207ENST00000589937 LARGE2Q8N3Y3 721 aa16.43■□□□□ 0.22
RFX1-207ENST00000589937 GJA3Q9Y6H8 435 aa16.43■□□□□ 0.22
RFX1-207ENST00000589937 PPIP5K2O43314 1243 aa16.42■□□□□ 0.22
RFX1-207ENST00000589937 CC2D2BQ6DHV5 1058 aa16.42■□□□□ 0.22
RFX1-207ENST00000589937 MRS2Q9HD23 443 aa16.42■□□□□ 0.22
RFX1-207ENST00000589937 SCN9AQ15858 1988 aa16.42■□□□□ 0.22
RFX1-207ENST00000589937 IQCA1LA6NCM1 817 aa16.41■□□□□ 0.22
RFX1-207ENST00000589937 ZNF316A6NFI3 1004 aaPredicted RBP16.41■□□□□ 0.22
RFX1-207ENST00000589937 EPHX2P34913 555 aa16.41■□□□□ 0.22
RFX1-207ENST00000589937 GRAPQ13588 217 aa16.41■□□□□ 0.22
RFX1-207ENST00000589937 GRAPLQ8TC17 118 aaPredicted RBP16.41■□□□□ 0.22
RFX1-207ENST00000589937 JDP2Q8WYK2 163 aa16.41■□□□□ 0.22
RFX1-207ENST00000589937 JARID2Q92833 1246 aaPredicted RBP16.41■□□□□ 0.22
RFX1-207ENST00000589937 HACL1Q9UJ83 578 aa16.41■□□□□ 0.22
RFX1-207ENST00000589937 TRPM7Q96QT4 1865 aa16.41■□□□□ 0.22
RFX1-207ENST00000589937 ZEB1P37275 1124 aaPredicted RBP16.4■□□□□ 0.22
RFX1-207ENST00000589937 CALD1Q05682 793 aaKnown RBP16.4■□□□□ 0.22
RFX1-207ENST00000589937 GOLGA2Q08379 1002 aa16.4■□□□□ 0.22
RFX1-207ENST00000589937 DDX46Q7L014 1031 aaKnown RBP16.4■□□□□ 0.22
RFX1-207ENST00000589937 RIC3Q7Z5B4 369 aa16.4■□□□□ 0.22
RFX1-207ENST00000589937 LDHDQ86WU2 507 aa16.4■□□□□ 0.22
RFX1-207ENST00000589937 GPC2Q8N158 579 aa16.4■□□□□ 0.22
RFX1-207ENST00000589937 CELF1Q92879 486 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms