RNA–Protein interactions for RNA: ENST00000589759.1

ATP6V0A1-223, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-223	ENST00000589759	USP26	Q9BXU7	913 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	GNL3L	Q9NVN8	582 aa	Known RBP	6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	SETD1A	O15047	1707 aa	Known RBP	6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	KIAA1210	Q9ULL0	1709 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ABCA6	Q8N139	1617 aa		6.07	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	APAF1	O14727	1248 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	IPO7	O95373	1038 aa	Known RBP	6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ARID4A	P29374	1257 aa	Predicted RBP	6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ICA1	Q05084	483 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ADCY2	Q08462	1091 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CUL4A	Q13619	759 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	SMC1A	Q14683	1233 aa	Known RBP	6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CCDC93	Q567U6	631 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ARSI	Q5FYB1	569 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CCDC186	Q7Z3E2	898 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ANKRD23	Q86SG2	305 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CHD1L	Q86WJ1	897 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	PLA2G4D	Q86XP0	818 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	DZIP1L	Q8IYY4	767 aa	Known RBP	6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ZGPAT	Q8N5A5	531 aa	Known RBP	6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ERCC4	Q92889	916 aa	Predicted RBP	6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ZNF428	Q96B54	188 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	MIEF2	Q96C03	454 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	INTS4	Q96HW7	963 aa	Known RBP	6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	NUCKS1	Q9H1E3	243 aa	Known RBP	6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ETAA1	Q9NY74	926 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CHIC2	Q9UKJ5	165 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	EXOC6B	Q9Y2D4	811 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CD109	Q6YHK3	1445 aa		6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	POLR3A	O14802	1390 aa	Predicted RBP	6.06	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	SPHKAP	Q2M3C7	1700 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	COQ9	O75208	318 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	EIF3J	O75822	258 aa	Known RBP	6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	TBC1D8	O95759	1140 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ELF1	P32519	619 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	LMAN1	P49257	510 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ZNF75D	P51815	510 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	UBE2H	P62256	183 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	NEDD9	Q14511	834 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CCDC158	Q5M9N0	1113 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CCDC30	Q5VVM6	783 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CC2D2B	Q6DHV5	1058 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	WDR63	Q8IWG1	891 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	TEX11	Q8IYF3	940 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	SPC24	Q8NBT2	197 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	GIMAP7	Q8NHV1	300 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	FAM200A	Q8TCP9	573 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	TATDN2	Q93075	761 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	MKL1	Q969V6	931 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	GCC1	Q96CN9	775 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	SRRT	Q9BXP5	876 aa	Known RBP	6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ORC3	Q9UBD5	711 aa	Predicted RBP	6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ATP1B4	Q9UN42	357 aa	Predicted RBP	6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	TRAK1	Q9UPV9	953 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	TNN	Q9UQP3	1299 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	KNDC1	Q76NI1	1749 aa		6.05	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	WDR33	Q9C0J8	1336 aa	Known RBP	6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	FANCA	O15360	1455 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ATP10B	O94823	1461 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	U2SURP	O15042	1029 aa	Known RBP	6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	GADD45B	O75293	160 aa	Predicted RBP	6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CCDC192	P0DO97	292 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	GCFC2	P16383	781 aa	Known RBP	6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CAST	P20810	708 aa	Known RBP	6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	KCNJ6	P48051	423 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	DDR1	Q08345	913 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	LRMP	Q12912	555 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	GRIK3	Q13003	919 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	TRAF1	Q13077	416 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CRYM	Q14894	314 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	SETDB1	Q15047	1291 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CCDC27	Q2M243	656 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ERCC6L	Q2NKX8	1250 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	RGL3	Q3MIN7	710 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ARHGAP29	Q52LW3	1261 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	AP1AR	Q63HQ0	302 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	TTLL5	Q6EMB2	1281 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	GBP6	Q6ZN66	633 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	USP48	Q86UV5	1035 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	TESK2	Q96S53	571 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	SH3GL3	Q99963	347 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	CLIP2	Q9UDT6	1046 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	MCM8	Q9UJA3	840 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ADAM21	Q9UKJ8	722 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	NOS1	P29475	1434 aa		6.04	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	RAPGEF6	Q8TEU7	1601 aa		6.03	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	MADD	Q8WXG6	1647 aa		6.03	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	PHLPP2	Q6ZVD8	1323 aa		6.03	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	ATXN2	Q99700	1313 aa	Known RBP	6.03	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	TTC37	Q6PGP7	1564 aa		6.03	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	PPFIA4	O75335	1185 aa		6.03	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	SCP2	P22307	547 aa		6.03	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	HNRNPH1	P31943	449 aa	Known RBP	6.03	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	MNAT1	P51948	309 aa		6.03	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	MRPL12	P52815	198 aa	Known RBP	6.03	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	RWDD2B	P57060	319 aa		6.03	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	TMF1	P82094	1093 aa		6.03	□□□□□ -1.44
ATP6V0A1-223	ENST00000589759	WWC2	Q6AWC2	1192 aa		6.03	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms