RNA–Protein interactions for RNA: ENST00000589686.5

CIRBP-224, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-224ENST00000589686 ALDH1B1P30837 517 aa27.13■■□□□ 1.93
CIRBP-224ENST00000589686 SLX4Q8IY92 1834 aa27.13■■□□□ 1.93
CIRBP-224ENST00000589686 NFKBIEO00221 500 aa27.12■■□□□ 1.93
CIRBP-224ENST00000589686 ANKRD36CQ5JPF3 1778 aa27.12■■□□□ 1.93
CIRBP-224ENST00000589686 ARFGEF2Q9Y6D5 1785 aa27.12■■□□□ 1.93
CIRBP-224ENST00000589686 SBF1O95248 1867 aa27.11■■□□□ 1.93
CIRBP-224ENST00000589686 GOLGA2Q08379 1002 aa27.11■■□□□ 1.93
CIRBP-224ENST00000589686 SLC10A5Q5PT55 438 aa27.11■■□□□ 1.93
CIRBP-224ENST00000589686 TNRC6CQ9HCJ0 1690 aaKnown RBP27.11■■□□□ 1.93
CIRBP-224ENST00000589686 TWISTNBQ3B726 338 aaPredicted RBP27.1■■□□□ 1.93
CIRBP-224ENST00000589686 C7orf43Q8WVR3 580 aa27.1■■□□□ 1.93
CIRBP-224ENST00000589686 RPGRQ92834 1020 aaKnown RBP27.1■■□□□ 1.93
CIRBP-224ENST00000589686 PHAXQ9H814 394 aaKnown RBP27.1■■□□□ 1.93
CIRBP-224ENST00000589686 RIC3Q7Z5B4 369 aa27.09■■□□□ 1.93
CIRBP-224ENST00000589686 NLRP3Q96P20 1036 aa27.09■■□□□ 1.93
CIRBP-224ENST00000589686 TRMT112Q9UI30 125 aaKnown RBP27.09■■□□□ 1.93
CIRBP-224ENST00000589686 FANCIQ9NVI1 1328 aa27.09■■□□□ 1.93
CIRBP-224ENST00000589686 CACNA1SQ13698 1873 aa27.08■■□□□ 1.93
CIRBP-224ENST00000589686 HOXA10P31260 410 aaPredicted RBP27.08■■□□□ 1.93
CIRBP-224ENST00000589686 ISCA1Q9BUE6 129 aa27.08■■□□□ 1.93
CIRBP-224ENST00000589686 STK31Q9BXU1 1019 aa27.08■■□□□ 1.93
CIRBP-224ENST00000589686 LTBP3Q9NS15 1303 aa27.08■■□□□ 1.93
CIRBP-224ENST00000589686 ZC3H4Q9UPT8 1303 aaKnown RBP27.08■■□□□ 1.93
CIRBP-224ENST00000589686 PRELPP51888 382 aa27.07■■□□□ 1.92
CIRBP-224ENST00000589686 CCDC93Q567U6 631 aa27.07■■□□□ 1.92
CIRBP-224ENST00000589686 TAOK3Q9H2K8 898 aa27.07■■□□□ 1.92
CIRBP-224ENST00000589686 SH3TC1Q8TE82 1336 aa27.07■■□□□ 1.92
CIRBP-224ENST00000589686 DDX58O95786 925 aaKnown RBP27.06■■□□□ 1.92
CIRBP-224ENST00000589686 C1QTNF8P60827 252 aa27.06■■□□□ 1.92
CIRBP-224ENST00000589686 RBM17Q96I25 401 aaKnown RBP27.06■■□□□ 1.92
CIRBP-224ENST00000589686 FER1L6Q2WGJ9 1857 aa27.06■■□□□ 1.92
CIRBP-224ENST00000589686 ATP5J2-PTCD1G3V325 749 aa27.05■■□□□ 1.92
CIRBP-224ENST00000589686 TRIM28Q13263 835 aaKnown RBP27.05■■□□□ 1.92
CIRBP-224ENST00000589686 CRAMP1Q96RY5 1269 aa27.05■■□□□ 1.92
CIRBP-224ENST00000589686 CCER2I3L3R5 266 aa27.04■■□□□ 1.92
CIRBP-224ENST00000589686 C3orf67Q6ZVT6 689 aa27.04■■□□□ 1.92
CIRBP-224ENST00000589686 MYH16Q9H6N6 1097 aa27.04■■□□□ 1.92
CIRBP-224ENST00000589686 RTKN2Q8IZC4 609 aa27.03■■□□□ 1.92
CIRBP-224ENST00000589686 KDM2BQ8NHM5 1336 aa27.03■■□□□ 1.92
CIRBP-224ENST00000589686 HCLS1P14317 486 aaPredicted RBP27.02■■□□□ 1.92
CIRBP-224ENST00000589686 SYNE4Q8N205 404 aa27.02■■□□□ 1.92
CIRBP-224ENST00000589686 SPINK5Q9NQ38 1064 aaPredicted RBP27.02■■□□□ 1.92
CIRBP-224ENST00000589686 TCERG1O14776 1098 aaKnown RBP27.01■■□□□ 1.91
CIRBP-224ENST00000589686 EXOSC9Q06265 439 aaKnown RBP27.01■■□□□ 1.91
CIRBP-224ENST00000589686 CC2D2BQ6DHV5 1058 aa27.01■■□□□ 1.91
CIRBP-224ENST00000589686 SLC4A2P04920 1241 aa27■■□□□ 1.91
CIRBP-224ENST00000589686 ZNF428Q96B54 188 aa27■■□□□ 1.91
CIRBP-224ENST00000589686 MYD88Q99836 296 aa27■■□□□ 1.91
CIRBP-224ENST00000589686 CCDC88AQ3V6T2 1871 aa27■■□□□ 1.91
CIRBP-224ENST00000589686 KIF3CO14782 793 aa26.99■■□□□ 1.91
CIRBP-224ENST00000589686 VAMP4O75379 141 aa26.99■■□□□ 1.91
CIRBP-224ENST00000589686 FKBP4Q02790 459 aaKnown RBP eCLIP26.99■■□□□ 1.91
CIRBP-224ENST00000589686 OLFM4Q6UX06 510 aa26.99■■□□□ 1.91
CIRBP-224ENST00000589686 FAM89AQ96GI7 184 aa26.99■■□□□ 1.91
CIRBP-224ENST00000589686 METTL22Q9BUU2 404 aaPredicted RBP26.99■■□□□ 1.91
CIRBP-224ENST00000589686 ZNF521Q96K83 1311 aa26.98■■□□□ 1.91
CIRBP-224ENST00000589686 GRIPAP1Q4V328 841 aa26.98■■□□□ 1.91
CIRBP-224ENST00000589686 KSR2Q6VAB6 950 aa26.98■■□□□ 1.91
CIRBP-224ENST00000589686 NMRK2Q9NPI5 230 aa26.98■■□□□ 1.91
CIRBP-224ENST00000589686 PPEF1O14829 653 aaPredicted RBP26.97■■□□□ 1.91
CIRBP-224ENST00000589686 CCDC191Q8NCU4 936 aa26.97■■□□□ 1.91
CIRBP-224ENST00000589686 MAP3K2Q9Y2U5 619 aa26.97■■□□□ 1.91
CIRBP-224ENST00000589686 PI4KAP2A4QPH2 592 aa26.96■■□□□ 1.91
CIRBP-224ENST00000589686 GLTPD2A6NH11 291 aa26.96■■□□□ 1.91
CIRBP-224ENST00000589686 PI4KAP1Q8N8J0 262 aa26.96■■□□□ 1.91
CIRBP-224ENST00000589686 ZBTB38Q8NAP3 1195 aaPredicted RBP26.96■■□□□ 1.91
CIRBP-224ENST00000589686 DDX46Q7L014 1031 aaKnown RBP26.95■■□□□ 1.9
CIRBP-224ENST00000589686 TMX4Q9H1E5 349 aaPredicted RBP26.95■■□□□ 1.9
CIRBP-224ENST00000589686 TIAM2Q8IVF5 1701 aa26.95■■□□□ 1.9
CIRBP-224ENST00000589686 DICER1Q9UPY3 1922 aaKnown RBP26.94■■□□□ 1.9
CIRBP-224ENST00000589686 ABCC4O15439 1325 aa26.94■■□□□ 1.9
CIRBP-224ENST00000589686 BBOX1O75936 387 aa26.94■■□□□ 1.9
CIRBP-224ENST00000589686 HSP90B1P14625 803 aaKnown RBP26.94■■□□□ 1.9
CIRBP-224ENST00000589686 DPY19L2Q6NUT2 758 aa26.94■■□□□ 1.9
CIRBP-224ENST00000589686 G2E3Q7L622 706 aa26.94■■□□□ 1.9
CIRBP-224ENST00000589686 PSMD1Q99460 953 aa26.94■■□□□ 1.9
CIRBP-224ENST00000589686 CWC25Q9NXE8 425 aaPredicted RBP26.94■■□□□ 1.9
CIRBP-224ENST00000589686 IRS4O14654 1257 aaPredicted RBP26.93■■□□□ 1.9
CIRBP-224ENST00000589686 NEXNQ0ZGT2 675 aa26.93■■□□□ 1.9
CIRBP-224ENST00000589686 RTL5Q5HYW3 569 aaPredicted RBP26.93■■□□□ 1.9
CIRBP-224ENST00000589686 ZNF277Q9NRM2 450 aaPredicted RBP26.93■■□□□ 1.9
CIRBP-224ENST00000589686 LAMB2P55268 1798 aa26.93■■□□□ 1.9
CIRBP-224ENST00000589686 SNED1Q8TER0 1413 aa26.92■■□□□ 1.9
CIRBP-224ENST00000589686 FLIIQ13045 1269 aa26.92■■□□□ 1.9
CIRBP-224ENST00000589686 SF3B3Q15393 1217 aaKnown RBP26.92■■□□□ 1.9
CIRBP-224ENST00000589686 ATP6V0A2Q9Y487 856 aa26.92■■□□□ 1.9
CIRBP-224ENST00000589686 DDX60Q8IY21 1712 aaKnown RBP26.91■■□□□ 1.9
CIRBP-224ENST00000589686 PCCAP05165 728 aaPredicted RBP26.91■■□□□ 1.9
CIRBP-224ENST00000589686 RRAGCQ9HB90 399 aa26.91■■□□□ 1.9
CIRBP-224ENST00000589686 CACNA1FO60840 1977 aa26.9■■□□□ 1.9
CIRBP-224ENST00000589686 TOMM70O94826 608 aa26.9■■□□□ 1.9
CIRBP-224ENST00000589686 IARSP41252 1262 aaKnown RBP26.9■■□□□ 1.9
CIRBP-224ENST00000589686 GRAPQ13588 217 aa26.9■■□□□ 1.9
CIRBP-224ENST00000589686 GRAPLQ8TC17 118 aaPredicted RBP26.9■■□□□ 1.9
CIRBP-224ENST00000589686 FKBP5Q13451 457 aaPredicted RBP26.89■■□□□ 1.9
CIRBP-224ENST00000589686 C16orf71Q8IYS4 520 aaPredicted RBP26.89■■□□□ 1.9
CIRBP-224ENST00000589686 E9PSI1 815 aa26.88■■□□□ 1.89
CIRBP-224ENST00000589686 IGKV5-2P06315 115 aa26.88■■□□□ 1.89
CIRBP-224ENST00000589686 DIEXFQ68CQ4 756 aaKnown RBP26.88■■□□□ 1.89
CIRBP-224ENST00000589686 TMC4Q7Z404 712 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms