RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 ARFGEF2Q9Y6D5 1785 aa21.09■□□□□ 0.97
DNMT1-221ENST00000589538 VAMP4O75379 141 aa21.08■□□□□ 0.97
DNMT1-221ENST00000589538 ERFEQ4G0M1 354 aa21.08■□□□□ 0.97
DNMT1-221ENST00000589538 NLRP10Q86W26 655 aa21.08■□□□□ 0.97
DNMT1-221ENST00000589538 NUTM1Q86Y26 1132 aa21.08■□□□□ 0.97
DNMT1-221ENST00000589538 TRIM28Q13263 835 aaKnown RBP21.07■□□□□ 0.96
DNMT1-221ENST00000589538 SLC4A2P04920 1241 aa21.06■□□□□ 0.96
DNMT1-221ENST00000589538 ISCA1Q9BUE6 129 aa21.06■□□□□ 0.96
DNMT1-221ENST00000589538 TRMT112Q9UI30 125 aaKnown RBP21.06■□□□□ 0.96
DNMT1-221ENST00000589538 ABCC12Q96J65 1359 aa21.06■□□□□ 0.96
DNMT1-221ENST00000589538 ALDH1B1P30837 517 aa21.05■□□□□ 0.96
DNMT1-221ENST00000589538 SLC10A5Q5PT55 438 aa21.05■□□□□ 0.96
DNMT1-221ENST00000589538 SOGA3Q5TF21 947 aa21.05■□□□□ 0.96
DNMT1-221ENST00000589538 SH3TC1Q8TE82 1336 aa21.04■□□□□ 0.96
DNMT1-221ENST00000589538 CRY2Q49AN0 593 aa21.04■□□□□ 0.96
DNMT1-221ENST00000589538 NLRP3Q96P20 1036 aa21.04■□□□□ 0.96
DNMT1-221ENST00000589538 TNRC6CQ9HCJ0 1690 aaKnown RBP21.03■□□□□ 0.96
DNMT1-221ENST00000589538 PRPF40BQ6NWY9 871 aaKnown RBP21.03■□□□□ 0.96
DNMT1-221ENST00000589538 KSR2Q6VAB6 950 aa21.03■□□□□ 0.96
DNMT1-221ENST00000589538 RPGRQ92834 1020 aaKnown RBP21.03■□□□□ 0.96
DNMT1-221ENST00000589538 ATP5J2-PTCD1G3V325 749 aa21.02■□□□□ 0.96
DNMT1-221ENST00000589538 TCERG1O14776 1098 aaKnown RBP21.02■□□□□ 0.96
DNMT1-221ENST00000589538 HSP90B1P14625 803 aaKnown RBP21.02■□□□□ 0.96
DNMT1-221ENST00000589538 SLFN5Q08AF3 891 aa21.02■□□□□ 0.96
DNMT1-221ENST00000589538 METTL22Q9BUU2 404 aaPredicted RBP21.02■□□□□ 0.96
DNMT1-221ENST00000589538 CACNA1SQ13698 1873 aa21.02■□□□□ 0.96
DNMT1-221ENST00000589538 NEXNQ0ZGT2 675 aa21.01■□□□□ 0.95
DNMT1-221ENST00000589538 FLIIQ13045 1269 aa21.01■□□□□ 0.95
DNMT1-221ENST00000589538 CCDC191Q8NCU4 936 aa21.01■□□□□ 0.95
DNMT1-221ENST00000589538 MYD88Q99836 296 aa21.01■□□□□ 0.95
DNMT1-221ENST00000589538 MAP3K2Q9Y2U5 619 aa21.01■□□□□ 0.95
DNMT1-221ENST00000589538 SLX4Q8IY92 1834 aa21.01■□□□□ 0.95
DNMT1-221ENST00000589538 PI4KAP2A4QPH2 592 aa21■□□□□ 0.95
DNMT1-221ENST00000589538 C21orf2O43822 256 aa21■□□□□ 0.95
DNMT1-221ENST00000589538 HOXA10P31260 410 aaPredicted RBP21■□□□□ 0.95
DNMT1-221ENST00000589538 PI4KAP1Q8N8J0 262 aa21■□□□□ 0.95
DNMT1-221ENST00000589538 ZNF428Q96B54 188 aa21■□□□□ 0.95
DNMT1-221ENST00000589538 RBM17Q96I25 401 aaKnown RBP21■□□□□ 0.95
DNMT1-221ENST00000589538 ZNF784Q8NCA9 323 aaPredicted RBP20.99■□□□□ 0.95
DNMT1-221ENST00000589538 CRAMP1Q96RY5 1269 aa20.99■□□□□ 0.95
DNMT1-221ENST00000589538 ADCY9O60503 1353 aa20.98■□□□□ 0.95
DNMT1-221ENST00000589538 FKBP5Q13451 457 aaPredicted RBP20.98■□□□□ 0.95
DNMT1-221ENST00000589538 G2E3Q7L622 706 aa20.98■□□□□ 0.95
DNMT1-221ENST00000589538 ZBTB38Q8NAP3 1195 aaPredicted RBP20.98■□□□□ 0.95
DNMT1-221ENST00000589538 CWC25Q9NXE8 425 aaPredicted RBP20.98■□□□□ 0.95
DNMT1-221ENST00000589538 HCLS1P14317 486 aaPredicted RBP20.97■□□□□ 0.95
DNMT1-221ENST00000589538 CCDC93Q567U6 631 aa20.97■□□□□ 0.95
DNMT1-221ENST00000589538 SBF1O95248 1867 aa20.96■□□□□ 0.95
DNMT1-221ENST00000589538 FER1L6Q2WGJ9 1857 aa20.96■□□□□ 0.95
DNMT1-221ENST00000589538 LMNB1P20700 586 aa20.96■□□□□ 0.95
DNMT1-221ENST00000589538 GRIPAP1Q4V328 841 aa20.96■□□□□ 0.95
DNMT1-221ENST00000589538 C9orf131Q5VYM1 1079 aa20.96■□□□□ 0.95
DNMT1-221ENST00000589538 CC2D2BQ6DHV5 1058 aa20.96■□□□□ 0.95
DNMT1-221ENST00000589538 TRMT2AQ8IZ69 625 aaKnown RBP20.96■□□□□ 0.95
DNMT1-221ENST00000589538 C7orf43Q8WVR3 580 aa20.96■□□□□ 0.95
DNMT1-221ENST00000589538 FAM89AQ96GI7 184 aa20.96■□□□□ 0.95
DNMT1-221ENST00000589538 ZNF219Q9P2Y4 722 aaPredicted RBP20.96■□□□□ 0.95
DNMT1-221ENST00000589538 LTBP3Q9NS15 1303 aa20.96■□□□□ 0.95
DNMT1-221ENST00000589538 LAMB2P55268 1798 aa20.95■□□□□ 0.94
DNMT1-221ENST00000589538 PCCAP05165 728 aaPredicted RBP20.95■□□□□ 0.94
DNMT1-221ENST00000589538 CT47B1P0C2W7 299 aaPredicted RBP20.95■□□□□ 0.94
DNMT1-221ENST00000589538 RTKN2Q8IZC4 609 aa20.95■□□□□ 0.94
DNMT1-221ENST00000589538 ZC3H4Q9UPT8 1303 aaKnown RBP20.95■□□□□ 0.94
DNMT1-221ENST00000589538 DDX60Q8IY21 1712 aaKnown RBP20.95■□□□□ 0.94
DNMT1-221ENST00000589538 IRS4O14654 1257 aaPredicted RBP20.94■□□□□ 0.94
DNMT1-221ENST00000589538 DDX46Q7L014 1031 aaKnown RBP20.94■□□□□ 0.94
DNMT1-221ENST00000589538 SYNE4Q8N205 404 aa20.94■□□□□ 0.94
DNMT1-221ENST00000589538 DNAAF4Q8WXU2 420 aa20.94■□□□□ 0.94
DNMT1-221ENST00000589538 CDCA7LQ96GN5 454 aa20.94■□□□□ 0.94
DNMT1-221ENST00000589538 TAOK3Q9H2K8 898 aa20.94■□□□□ 0.94
DNMT1-221ENST00000589538 RNF181Q9P0P0 153 aa20.94■□□□□ 0.94
DNMT1-221ENST00000589538 NFKBIEO00221 500 aa20.93■□□□□ 0.94
DNMT1-221ENST00000589538 RASSF7Q02833 373 aa20.93■□□□□ 0.94
DNMT1-221ENST00000589538 C3orf67Q6ZVT6 689 aa20.93■□□□□ 0.94
DNMT1-221ENST00000589538 TMX4Q9H1E5 349 aaPredicted RBP20.93■□□□□ 0.94
DNMT1-221ENST00000589538 IGKV5-2P06315 115 aa20.92■□□□□ 0.94
DNMT1-221ENST00000589538 SF3B3Q15393 1217 aaKnown RBP20.92■□□□□ 0.94
DNMT1-221ENST00000589538 NEURL1BA8MQ27 555 aa20.91■□□□□ 0.94
DNMT1-221ENST00000589538 PPEF1O14829 653 aaPredicted RBP20.91■□□□□ 0.94
DNMT1-221ENST00000589538 BBOX1O75936 387 aa20.91■□□□□ 0.94
DNMT1-221ENST00000589538 HNRNPUQ00839 825 aaKnown RBP eCLIP20.91■□□□□ 0.94
DNMT1-221ENST00000589538 CCDC88AQ3V6T2 1871 aa20.91■□□□□ 0.94
DNMT1-221ENST00000589538 TMC4Q7Z404 712 aa20.91■□□□□ 0.94
DNMT1-221ENST00000589538 LINS1Q8NG48 757 aa20.91■□□□□ 0.94
DNMT1-221ENST00000589538 CDHR2Q9BYE9 1310 aa20.91■□□□□ 0.94
DNMT1-221ENST00000589538 ABCC4O15439 1325 aa20.9■□□□□ 0.94
DNMT1-221ENST00000589538 FKBP4Q02790 459 aaKnown RBP eCLIP20.9■□□□□ 0.94
DNMT1-221ENST00000589538 ALDH1L2Q3SY69 923 aa20.9■□□□□ 0.94
DNMT1-221ENST00000589538 RTL5Q5HYW3 569 aaPredicted RBP20.9■□□□□ 0.94
DNMT1-221ENST00000589538 DICER1Q9UPY3 1922 aaKnown RBP20.89■□□□□ 0.93
DNMT1-221ENST00000589538 PDE8AO60658 829 aa20.89■□□□□ 0.93
DNMT1-221ENST00000589538 GRAPQ13588 217 aa20.89■□□□□ 0.93
DNMT1-221ENST00000589538 GRAPLQ8TC17 118 aaPredicted RBP20.89■□□□□ 0.93
DNMT1-221ENST00000589538 PTPRCP08575 1304 aa20.88■□□□□ 0.93
DNMT1-221ENST00000589538 CWF19L2Q2TBE0 894 aaKnown RBP20.88■□□□□ 0.93
DNMT1-221ENST00000589538 PSMD1Q99460 953 aa20.88■□□□□ 0.93
DNMT1-221ENST00000589538 GPBP1L1Q9HC44 474 aaPredicted RBP20.88■□□□□ 0.93
DNMT1-221ENST00000589538 ATP6V0A2Q9Y487 856 aa20.88■□□□□ 0.93
DNMT1-221ENST00000589538 GCKRQ14397 625 aa20.87■□□□□ 0.93
DNMT1-221ENST00000589538 CCDC152Q4G0S7 254 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms