RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 PARP10Q53GL7 1025 aa13.75□□□□□ -0.21
CLPTM1-211ENST00000589347 TTLL7Q6ZT98 887 aa13.75□□□□□ -0.21
CLPTM1-211ENST00000589347 PPP1R42Q7Z4L9 355 aa13.75□□□□□ -0.21
CLPTM1-211ENST00000589347 CCDC24Q8N4L8 307 aa13.75□□□□□ -0.21
CLPTM1-211ENST00000589347 POTEIP0CG38 1075 aa13.74□□□□□ -0.21
CLPTM1-211ENST00000589347 POTEJP0CG39 1038 aa13.74□□□□□ -0.21
CLPTM1-211ENST00000589347 SRGNP10124 158 aa13.74□□□□□ -0.21
CLPTM1-211ENST00000589347 NPR1P16066 1061 aa13.74□□□□□ -0.21
CLPTM1-211ENST00000589347 GIGYF2Q6Y7W6 1299 aaKnown RBP13.74□□□□□ -0.21
CLPTM1-211ENST00000589347 AIDAQ96BJ3 306 aa13.74□□□□□ -0.21
CLPTM1-211ENST00000589347 CHMP4AQ9BY43 222 aa13.74□□□□□ -0.21
CLPTM1-211ENST00000589347 DDX21Q9NR30 783 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLPTM1-211ENST00000589347 WBP1LQ9NX94 342 aa13.74□□□□□ -0.21
CLPTM1-211ENST00000589347 THSD7BQ9C0I4 1608 aa13.74□□□□□ -0.21
CLPTM1-211ENST00000589347 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
CLPTM1-211ENST00000589347 RNF123Q5XPI4 1314 aa13.73□□□□□ -0.21
CLPTM1-211ENST00000589347 MYH3P11055 1940 aa13.73□□□□□ -0.21
CLPTM1-211ENST00000589347 RGS19P49795 217 aa13.73□□□□□ -0.21
CLPTM1-211ENST00000589347 DPY19L2Q6NUT2 758 aa13.73□□□□□ -0.21
CLPTM1-211ENST00000589347 NECTIN2Q92692 538 aa13.73□□□□□ -0.21
CLPTM1-211ENST00000589347 MBIPQ9NS73 344 aa13.73□□□□□ -0.21
CLPTM1-211ENST00000589347 ABCC12Q96J65 1359 aa13.72□□□□□ -0.21
CLPTM1-211ENST00000589347 GPTP24298 496 aa13.72□□□□□ -0.21
CLPTM1-211ENST00000589347 VEGFBP49765 207 aa13.72□□□□□ -0.21
CLPTM1-211ENST00000589347 LBX1P52954 281 aa13.72□□□□□ -0.21
CLPTM1-211ENST00000589347 PRPF40BQ6NWY9 871 aaKnown RBP13.72□□□□□ -0.21
CLPTM1-211ENST00000589347 DBF4Q9UBU7 674 aaPredicted RBP13.72□□□□□ -0.21
CLPTM1-211ENST00000589347 ADAMTSL1Q8N6G6 1762 aa13.72□□□□□ -0.21
CLPTM1-211ENST00000589347 UBN2Q6ZU65 1347 aa13.71□□□□□ -0.21
CLPTM1-211ENST00000589347 LTBP3Q9NS15 1303 aa13.71□□□□□ -0.21
CLPTM1-211ENST00000589347 C21orf2O43822 256 aa13.71□□□□□ -0.21
CLPTM1-211ENST00000589347 HSPA8P11142 646 aaKnown RBP13.71□□□□□ -0.21
CLPTM1-211ENST00000589347 ALDH1B1P30837 517 aa13.71□□□□□ -0.21
CLPTM1-211ENST00000589347 AIMP1Q12904 312 aaKnown RBP13.71□□□□□ -0.21
CLPTM1-211ENST00000589347 PDIA6Q15084 440 aa13.71□□□□□ -0.21
CLPTM1-211ENST00000589347 CCDC27Q2M243 656 aa13.71□□□□□ -0.21
CLPTM1-211ENST00000589347 PROSER3Q2NL68 480 aa13.71□□□□□ -0.21
CLPTM1-211ENST00000589347 DUSP27Q5VZP5 1158 aa13.71□□□□□ -0.21
CLPTM1-211ENST00000589347 XAGE3Q8WTP9 111 aa13.71□□□□□ -0.21
CLPTM1-211ENST00000589347 RPGRQ92834 1020 aaKnown RBP13.71□□□□□ -0.21
CLPTM1-211ENST00000589347 TAOK3Q9H2K8 898 aa13.71□□□□□ -0.21
CLPTM1-211ENST00000589347 CHPF2Q9P2E5 772 aa13.71□□□□□ -0.21
CLPTM1-211ENST00000589347 SCN4AP35499 1836 aa13.71□□□□□ -0.22
CLPTM1-211ENST00000589347 ANXA1P04083 346 aa13.7□□□□□ -0.22
CLPTM1-211ENST00000589347 ZNF853P0CG23 659 aa13.7□□□□□ -0.22
CLPTM1-211ENST00000589347 MLLT1Q03111 559 aaPredicted RBP13.7□□□□□ -0.22
CLPTM1-211ENST00000589347 KRT24Q2M2I5 525 aa13.7□□□□□ -0.22
CLPTM1-211ENST00000589347 CCDC93Q567U6 631 aa13.7□□□□□ -0.22
CLPTM1-211ENST00000589347 COPS6Q7L5N1 327 aa13.7□□□□□ -0.22
CLPTM1-211ENST00000589347 LRP10Q7Z4F1 713 aa13.7□□□□□ -0.22
CLPTM1-211ENST00000589347 NUTM1Q86Y26 1132 aa13.7□□□□□ -0.22
CLPTM1-211ENST00000589347 ZNF34Q8IZ26 560 aa13.7□□□□□ -0.22
CLPTM1-211ENST00000589347 HYPKQ9NX55 129 aa13.7□□□□□ -0.22
CLPTM1-211ENST00000589347 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
CLPTM1-211ENST00000589347 KLRG2A4D1S0 409 aaPredicted RBP13.69□□□□□ -0.22
CLPTM1-211ENST00000589347 NTSR2O95665 410 aa13.69□□□□□ -0.22
CLPTM1-211ENST00000589347 GOLGA2Q08379 1002 aa13.69□□□□□ -0.22
CLPTM1-211ENST00000589347 ERFEQ4G0M1 354 aa13.69□□□□□ -0.22
CLPTM1-211ENST00000589347 CCDC184Q52MB2 194 aa13.69□□□□□ -0.22
CLPTM1-211ENST00000589347 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
CLPTM1-211ENST00000589347 LDHDQ86WU2 507 aa13.69□□□□□ -0.22
CLPTM1-211ENST00000589347 UTP14AQ9BVJ6 771 aaKnown RBP13.69□□□□□ -0.22
CLPTM1-211ENST00000589347 TMEM88BA6NKF7 163 aa13.68□□□□□ -0.22
CLPTM1-211ENST00000589347 SUSD4Q5VX71 490 aa13.68□□□□□ -0.22
CLPTM1-211ENST00000589347 RBM17Q96I25 401 aaKnown RBP13.68□□□□□ -0.22
CLPTM1-211ENST00000589347 L3MBTL3Q96JM7 780 aaPredicted RBP13.68□□□□□ -0.22
CLPTM1-211ENST00000589347 IL16Q14005 1332 aa13.67□□□□□ -0.22
CLPTM1-211ENST00000589347 PDE4DIPQ5VU43 2346 aa13.67□□□□□ -0.22
CLPTM1-211ENST00000589347 RASSF10A6NK89 507 aa13.67□□□□□ -0.22
CLPTM1-211ENST00000589347 ITGBL1O95965 494 aaPredicted RBP13.67□□□□□ -0.22
CLPTM1-211ENST00000589347 CRY2Q49AN0 593 aa13.67□□□□□ -0.22
CLPTM1-211ENST00000589347 PLBD2Q8NHP8 589 aa13.67□□□□□ -0.22
CLPTM1-211ENST00000589347 NLRP3Q96P20 1036 aa13.67□□□□□ -0.22
CLPTM1-211ENST00000589347 TMX4Q9H1E5 349 aaPredicted RBP13.67□□□□□ -0.22
CLPTM1-211ENST00000589347 TAF1P21675 1872 aa13.67□□□□□ -0.22
CLPTM1-211ENST00000589347 LRRC37AA6NMS7 1700 aa13.67□□□□□ -0.22
CLPTM1-211ENST00000589347 IQCA1LA6NCM1 817 aa13.66□□□□□ -0.22
CLPTM1-211ENST00000589347 DDNO94850 711 aaPredicted RBP13.66□□□□□ -0.22
CLPTM1-211ENST00000589347 TCIRG1Q13488 830 aa13.66□□□□□ -0.22
CLPTM1-211ENST00000589347 CCDC30Q5VVM6 783 aa13.66□□□□□ -0.22
CLPTM1-211ENST00000589347 RTKN2Q8IZC4 609 aa13.66□□□□□ -0.22
CLPTM1-211ENST00000589347 SH3TC1Q8TE82 1336 aa13.65□□□□□ -0.22
CLPTM1-211ENST00000589347 SPEF2Q9C093 1822 aa13.65□□□□□ -0.22
CLPTM1-211ENST00000589347 DDX58O95786 925 aaKnown RBP13.65□□□□□ -0.22
CLPTM1-211ENST00000589347 FKBP4Q02790 459 aaKnown RBP eCLIP13.65□□□□□ -0.22
CLPTM1-211ENST00000589347 GRIPAP1Q4V328 841 aa13.65□□□□□ -0.22
CLPTM1-211ENST00000589347 CC2D2BQ6DHV5 1058 aa13.65□□□□□ -0.22
CLPTM1-211ENST00000589347 ANKRD13DQ6ZTN6 518 aa13.65□□□□□ -0.22
CLPTM1-211ENST00000589347 NLRP10Q86W26 655 aa13.65□□□□□ -0.22
CLPTM1-211ENST00000589347 WWC1Q8IX03 1113 aa13.65□□□□□ -0.22
CLPTM1-211ENST00000589347 STK31Q9BXU1 1019 aa13.65□□□□□ -0.22
CLPTM1-211ENST00000589347 TAF1DQ9H5J8 278 aaPredicted RBP13.65□□□□□ -0.22
CLPTM1-211ENST00000589347 RIC3Q7Z5B4 369 aa13.64□□□□□ -0.23
CLPTM1-211ENST00000589347 CRAMP1Q96RY5 1269 aa13.64□□□□□ -0.23
CLPTM1-211ENST00000589347 TRMT112Q9UI30 125 aaKnown RBP13.64□□□□□ -0.23
CLPTM1-211ENST00000589347 LTBP1Q14766 1721 aa13.64□□□□□ -0.23
CLPTM1-211ENST00000589347 ELL2O00472 640 aaPredicted RBP13.63□□□□□ -0.23
CLPTM1-211ENST00000589347 PPEF1O14829 653 aaPredicted RBP13.63□□□□□ -0.23
CLPTM1-211ENST00000589347 HSP90B1P14625 803 aaKnown RBP13.63□□□□□ -0.23
CLPTM1-211ENST00000589347 HOXA10P31260 410 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 532.9 ms