RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 OTUD7AQ8TE49 926 aaPredicted RBP12.22□□□□□ -0.45
VPS25-202ENST00000589219 PIGBQ92521 554 aa12.22□□□□□ -0.45
VPS25-202ENST00000589219 TMOD3Q9NYL9 352 aa12.22□□□□□ -0.45
VPS25-202ENST00000589219 STAP2Q9UGK3 403 aa12.22□□□□□ -0.45
VPS25-202ENST00000589219 EXOC6BQ9Y2D4 811 aa12.22□□□□□ -0.45
VPS25-202ENST00000589219 C4BP0C0L5 1744 aa12.21□□□□□ -0.45
VPS25-202ENST00000589219 APBB1O00213 710 aa12.21□□□□□ -0.45
VPS25-202ENST00000589219 RABEP1Q15276 862 aa12.21□□□□□ -0.45
VPS25-202ENST00000589219 C16orf71Q8IYS4 520 aaPredicted RBP12.21□□□□□ -0.45
VPS25-202ENST00000589219 AK7Q96M32 723 aa12.21□□□□□ -0.45
VPS25-202ENST00000589219 SLKQ9H2G2 1235 aaPredicted RBP12.21□□□□□ -0.45
VPS25-202ENST00000589219 CHMP5Q9NZZ3 219 aa12.21□□□□□ -0.45
VPS25-202ENST00000589219 DSG3P32926 999 aa12.2□□□□□ -0.46
VPS25-202ENST00000589219 TTC5Q8N0Z6 440 aa12.2□□□□□ -0.46
VPS25-202ENST00000589219 KIF1BPQ96EK5 621 aa12.2□□□□□ -0.46
VPS25-202ENST00000589219 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
VPS25-202ENST00000589219 MAP3K2Q9Y2U5 619 aa12.2□□□□□ -0.46
VPS25-202ENST00000589219 UBR3Q6ZT12 1888 aa12.19□□□□□ -0.46
VPS25-202ENST00000589219 UTYO14607 1347 aa12.19□□□□□ -0.46
VPS25-202ENST00000589219 ERBB4Q15303 1308 aa12.19□□□□□ -0.46
VPS25-202ENST00000589219 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
VPS25-202ENST00000589219 ERC2O15083 957 aa12.19□□□□□ -0.46
VPS25-202ENST00000589219 SIK1P57059 783 aa12.19□□□□□ -0.46
VPS25-202ENST00000589219 PPP1R42Q7Z4L9 355 aa12.19□□□□□ -0.46
VPS25-202ENST00000589219 ZNF784Q8NCA9 323 aaPredicted RBP12.19□□□□□ -0.46
VPS25-202ENST00000589219 LINS1Q8NG48 757 aa12.19□□□□□ -0.46
VPS25-202ENST00000589219 KIF2CQ99661 725 aa12.19□□□□□ -0.46
VPS25-202ENST00000589219 K7ELQ4 463 aaPredicted RBP12.18□□□□□ -0.46
VPS25-202ENST00000589219 SRGAP3O43295 1099 aa12.18□□□□□ -0.46
VPS25-202ENST00000589219 EPB41L2O43491 1005 aaKnown RBP12.18□□□□□ -0.46
VPS25-202ENST00000589219 PROSER3Q2NL68 480 aa12.18□□□□□ -0.46
VPS25-202ENST00000589219 MSL1Q68DK7 614 aa12.18□□□□□ -0.46
VPS25-202ENST00000589219 ERC1Q8IUD2 1116 aa12.18□□□□□ -0.46
VPS25-202ENST00000589219 FMNL2Q96PY5 1086 aa12.18□□□□□ -0.46
VPS25-202ENST00000589219 UBR2Q8IWV8 1755 aa12.18□□□□□ -0.46
VPS25-202ENST00000589219 USP42Q9H9J4 1324 aaKnown RBP12.17□□□□□ -0.46
VPS25-202ENST00000589219 ERVV-2B6SEH9 535 aa12.17□□□□□ -0.46
VPS25-202ENST00000589219 GRIN3BO60391 1043 aa12.17□□□□□ -0.46
VPS25-202ENST00000589219 ANXA1P04083 346 aa12.17□□□□□ -0.46
VPS25-202ENST00000589219 SNRPA1P09661 255 aaKnown RBP12.17□□□□□ -0.46
VPS25-202ENST00000589219 SSFA2P28290 1259 aa12.17□□□□□ -0.46
VPS25-202ENST00000589219 IL27Q8NEV9 243 aa12.17□□□□□ -0.46
VPS25-202ENST00000589219 USP26Q9BXU7 913 aa12.17□□□□□ -0.46
VPS25-202ENST00000589219 C9orf78Q9NZ63 289 aaPredicted RBP12.17□□□□□ -0.46
VPS25-202ENST00000589219 ASAP1Q9ULH1 1129 aa12.17□□□□□ -0.46
VPS25-202ENST00000589219 CD2APQ9Y5K6 639 aa12.17□□□□□ -0.46
VPS25-202ENST00000589219 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
VPS25-202ENST00000589219 COL15A1P39059 1388 aa12.17□□□□□ -0.46
VPS25-202ENST00000589219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.16□□□□□ -0.46
VPS25-202ENST00000589219 FRAT2O75474 233 aaPredicted RBP12.16□□□□□ -0.46
VPS25-202ENST00000589219 SURF6O75683 361 aaKnown RBP12.16□□□□□ -0.46
VPS25-202ENST00000589219 NBPF7P0C2Y1 421 aaPredicted RBP12.16□□□□□ -0.46
VPS25-202ENST00000589219 MCCP23508 829 aa12.16□□□□□ -0.46
VPS25-202ENST00000589219 ATP6V1AP38606 617 aa12.16□□□□□ -0.46
VPS25-202ENST00000589219 CABP4P57796 275 aa12.16□□□□□ -0.46
VPS25-202ENST00000589219 NEXNQ0ZGT2 675 aa12.16□□□□□ -0.46
VPS25-202ENST00000589219 PDIA6Q15084 440 aa12.16□□□□□ -0.46
VPS25-202ENST00000589219 NLGN2Q8NFZ4 835 aa12.16□□□□□ -0.46
VPS25-202ENST00000589219 RHPN1Q8TCX5 695 aa12.16□□□□□ -0.46
VPS25-202ENST00000589219 TTC41PQ6P2S7 1318 aa12.15□□□□□ -0.46
VPS25-202ENST00000589219 GRM8O00222 908 aa12.15□□□□□ -0.46
VPS25-202ENST00000589219 PHF14O94880 888 aa12.15□□□□□ -0.46
VPS25-202ENST00000589219 DDIT3P35638 169 aa12.15□□□□□ -0.46
VPS25-202ENST00000589219 ESYT1Q9BSJ8 1104 aa12.15□□□□□ -0.46
VPS25-202ENST00000589219 ZNF831Q5JPB2 1677 aa12.15□□□□□ -0.46
VPS25-202ENST00000589219 PRAMEF22A3QJZ6 481 aa12.14□□□□□ -0.47
VPS25-202ENST00000589219 GNPATO15228 680 aa12.14□□□□□ -0.47
VPS25-202ENST00000589219 SLC39A6Q13433 755 aa12.14□□□□□ -0.47
VPS25-202ENST00000589219 RIC3Q7Z5B4 369 aa12.14□□□□□ -0.47
VPS25-202ENST00000589219 NFATC2IPQ8NCF5 419 aa12.14□□□□□ -0.47
VPS25-202ENST00000589219 LINC00116Q8NCU8 138 aa12.14□□□□□ -0.47
VPS25-202ENST00000589219 GPATCH3Q96I76 525 aa12.14□□□□□ -0.47
VPS25-202ENST00000589219 ZNF496Q96IT1 587 aaPredicted RBP12.14□□□□□ -0.47
VPS25-202ENST00000589219 ATG3Q9NT62 314 aa12.14□□□□□ -0.47
VPS25-202ENST00000589219 KCPQ6ZWJ8 1503 aa12.14□□□□□ -0.47
VPS25-202ENST00000589219 ARFGEF2Q9Y6D5 1785 aa12.13□□□□□ -0.47
VPS25-202ENST00000589219 ST18O60284 1047 aa12.13□□□□□ -0.47
VPS25-202ENST00000589219 CAPN15O75808 1086 aa12.13□□□□□ -0.47
VPS25-202ENST00000589219 PTMSP20962 102 aa12.13□□□□□ -0.47
VPS25-202ENST00000589219 ANAPC15P60006 121 aa12.13□□□□□ -0.47
VPS25-202ENST00000589219 OS9Q13438 667 aaPredicted RBP12.13□□□□□ -0.47
VPS25-202ENST00000589219 ITPK1Q13572 414 aa12.13□□□□□ -0.47
VPS25-202ENST00000589219 XAGE3Q8WTP9 111 aa12.13□□□□□ -0.47
VPS25-202ENST00000589219 METTL22Q9BUU2 404 aaPredicted RBP12.13□□□□□ -0.47
VPS25-202ENST00000589219 DDX11L8A8MPP1 907 aa12.12□□□□□ -0.47
VPS25-202ENST00000589219 NEURL1BA8MQ27 555 aa12.12□□□□□ -0.47
VPS25-202ENST00000589219 TRIM6-TRIM34B2RNG4 842 aa12.12□□□□□ -0.47
VPS25-202ENST00000589219 GLRX3O76003 335 aaKnown RBP12.12□□□□□ -0.47
VPS25-202ENST00000589219 HSP90AA1P07900 732 aaKnown RBP12.12□□□□□ -0.47
VPS25-202ENST00000589219 CHMLP26374 656 aa12.12□□□□□ -0.47
VPS25-202ENST00000589219 GSE1Q14687 1217 aa12.12□□□□□ -0.47
VPS25-202ENST00000589219 LRP10Q7Z4F1 713 aa12.12□□□□□ -0.47
VPS25-202ENST00000589219 CNTROBQ8N137 903 aa12.12□□□□□ -0.47
VPS25-202ENST00000589219 CLASRPQ8N2M8 674 aaKnown RBP12.12□□□□□ -0.47
VPS25-202ENST00000589219 PI4K2BQ8TCG2 481 aa12.12□□□□□ -0.47
VPS25-202ENST00000589219 IL17RAQ96F46 866 aa12.12□□□□□ -0.47
VPS25-202ENST00000589219 SUCLG2Q96I99 432 aa12.12□□□□□ -0.47
VPS25-202ENST00000589219 RBM42Q9BTD8 480 aaKnown RBP12.12□□□□□ -0.47
VPS25-202ENST00000589219 BCL11AQ9H165 835 aa12.12□□□□□ -0.47
VPS25-202ENST00000589219 IL1RAPL2Q9NP60 686 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms