RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 SYNE4Q8N205 404 aa12.77□□□□□ -0.37
PTPN2-208ENST00000589216 HYPKQ9NX55 129 aa12.77□□□□□ -0.37
PTPN2-208ENST00000589216 CACNA1FO60840 1977 aa12.77□□□□□ -0.37
PTPN2-208ENST00000589216 SNED1Q8TER0 1413 aa12.77□□□□□ -0.37
PTPN2-208ENST00000589216 TWISTNBQ3B726 338 aaPredicted RBP12.76□□□□□ -0.37
PTPN2-208ENST00000589216 CRY2Q49AN0 593 aa12.76□□□□□ -0.37
PTPN2-208ENST00000589216 STYK1Q6J9G0 422 aa12.76□□□□□ -0.37
PTPN2-208ENST00000589216 WDR63Q8IWG1 891 aa12.76□□□□□ -0.37
PTPN2-208ENST00000589216 PLBD2Q8NHP8 589 aa12.76□□□□□ -0.37
PTPN2-208ENST00000589216 LRRC37AA6NMS7 1700 aa12.75□□□□□ -0.37
PTPN2-208ENST00000589216 ATP5J2-PTCD1G3V325 749 aa12.75□□□□□ -0.37
PTPN2-208ENST00000589216 CCER2I3L3R5 266 aa12.75□□□□□ -0.37
PTPN2-208ENST00000589216 C21orf2O43822 256 aa12.75□□□□□ -0.37
PTPN2-208ENST00000589216 EXOSC9Q06265 439 aaKnown RBP12.75□□□□□ -0.37
PTPN2-208ENST00000589216 TCIRG1Q13488 830 aa12.75□□□□□ -0.37
PTPN2-208ENST00000589216 PARP10Q53GL7 1025 aa12.75□□□□□ -0.37
PTPN2-208ENST00000589216 OLFM4Q6UX06 510 aa12.75□□□□□ -0.37
PTPN2-208ENST00000589216 ZNF526Q8TF50 670 aaPredicted RBP12.75□□□□□ -0.37
PTPN2-208ENST00000589216 MASTLQ96GX5 879 aa12.75□□□□□ -0.37
PTPN2-208ENST00000589216 NYXQ9GZU5 481 aa12.75□□□□□ -0.37
PTPN2-208ENST00000589216 NPR1P16066 1061 aa12.74□□□□□ -0.37
PTPN2-208ENST00000589216 GTF2E1P29083 439 aaPredicted RBP12.74□□□□□ -0.37
PTPN2-208ENST00000589216 C9orf131Q5VYM1 1079 aa12.74□□□□□ -0.37
PTPN2-208ENST00000589216 ANKRD13DQ6ZTN6 518 aa12.74□□□□□ -0.37
PTPN2-208ENST00000589216 G2E3Q7L622 706 aa12.74□□□□□ -0.37
PTPN2-208ENST00000589216 ISCA1Q9BUE6 129 aa12.74□□□□□ -0.37
PTPN2-208ENST00000589216 PDZRN3Q9UPQ7 1066 aa12.74□□□□□ -0.37
PTPN2-208ENST00000589216 COL4A5P29400 1685 aa12.73□□□□□ -0.37
PTPN2-208ENST00000589216 GOLGA2Q08379 1002 aa12.73□□□□□ -0.37
PTPN2-208ENST00000589216 HSP90AB3PQ58FF7 597 aa12.73□□□□□ -0.37
PTPN2-208ENST00000589216 CCDC30Q5VVM6 783 aa12.73□□□□□ -0.37
PTPN2-208ENST00000589216 PPP1R42Q7Z4L9 355 aa12.73□□□□□ -0.37
PTPN2-208ENST00000589216 MIER1Q8N108 512 aa12.73□□□□□ -0.37
PTPN2-208ENST00000589216 C7orf43Q8WVR3 580 aa12.73□□□□□ -0.37
PTPN2-208ENST00000589216 CNKSR1Q969H4 720 aa12.73□□□□□ -0.37
PTPN2-208ENST00000589216 UTP14AQ9BVJ6 771 aaKnown RBP12.73□□□□□ -0.37
PTPN2-208ENST00000589216 RNF181Q9P0P0 153 aa12.73□□□□□ -0.37
PTPN2-208ENST00000589216 MYH3P11055 1940 aa12.72□□□□□ -0.37
PTPN2-208ENST00000589216 SPEF2Q9C093 1822 aa12.72□□□□□ -0.37
PTPN2-208ENST00000589216 HCLS1P14317 486 aaPredicted RBP12.72□□□□□ -0.37
PTPN2-208ENST00000589216 DIEXFQ68CQ4 756 aaKnown RBP12.72□□□□□ -0.37
PTPN2-208ENST00000589216 DUOX1Q9NRD9 1551 aa12.72□□□□□ -0.37
PTPN2-208ENST00000589216 RNF123Q5XPI4 1314 aa12.71□□□□□ -0.37
PTPN2-208ENST00000589216 SH3TC1Q8TE82 1336 aa12.71□□□□□ -0.37
PTPN2-208ENST00000589216 VAMP4O75379 141 aa12.71□□□□□ -0.37
PTPN2-208ENST00000589216 CACNB1Q02641 598 aaPredicted RBP12.71□□□□□ -0.37
PTPN2-208ENST00000589216 RTL5Q5HYW3 569 aaPredicted RBP12.71□□□□□ -0.37
PTPN2-208ENST00000589216 RIC3Q7Z5B4 369 aa12.71□□□□□ -0.37
PTPN2-208ENST00000589216 MYD88Q99836 296 aa12.71□□□□□ -0.37
PTPN2-208ENST00000589216 TRMT112Q9UI30 125 aaKnown RBP12.71□□□□□ -0.37
PTPN2-208ENST00000589216 LTBP1Q14766 1721 aa12.71□□□□□ -0.38
PTPN2-208ENST00000589216 ABCC4O15439 1325 aa12.7□□□□□ -0.38
PTPN2-208ENST00000589216 LTBP3Q9NS15 1303 aa12.7□□□□□ -0.38
PTPN2-208ENST00000589216 HOXA10P31260 410 aaPredicted RBP12.7□□□□□ -0.38
PTPN2-208ENST00000589216 SLC10A5Q5PT55 438 aa12.7□□□□□ -0.38
PTPN2-208ENST00000589216 RPGRQ92834 1020 aaKnown RBP12.7□□□□□ -0.38
PTPN2-208ENST00000589216 FAM89AQ96GI7 184 aa12.7□□□□□ -0.38
PTPN2-208ENST00000589216 STK31Q9BXU1 1019 aa12.7□□□□□ -0.38
PTPN2-208ENST00000589216 MYH16Q9H6N6 1097 aa12.7□□□□□ -0.38
PTPN2-208ENST00000589216 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
PTPN2-208ENST00000589216 PI4KAP2A4QPH2 592 aa12.69□□□□□ -0.38
PTPN2-208ENST00000589216 SLC4A2P04920 1241 aa12.69□□□□□ -0.38
PTPN2-208ENST00000589216 IGKV5-2P06315 115 aa12.69□□□□□ -0.38
PTPN2-208ENST00000589216 FLIIQ13045 1269 aa12.69□□□□□ -0.38
PTPN2-208ENST00000589216 PI4KAP1Q8N8J0 262 aa12.69□□□□□ -0.38
PTPN2-208ENST00000589216 JARID2Q92833 1246 aaPredicted RBP12.69□□□□□ -0.38
PTPN2-208ENST00000589216 CDCA7LQ96GN5 454 aa12.69□□□□□ -0.38
PTPN2-208ENST00000589216 METTL22Q9BUU2 404 aaPredicted RBP12.69□□□□□ -0.38
PTPN2-208ENST00000589216 LMNB1P20700 586 aa12.68□□□□□ -0.38
PTPN2-208ENST00000589216 TRIM28Q13263 835 aaKnown RBP12.68□□□□□ -0.38
PTPN2-208ENST00000589216 CCDC93Q567U6 631 aa12.68□□□□□ -0.38
PTPN2-208ENST00000589216 TAOK3Q9H2K8 898 aa12.68□□□□□ -0.38
PTPN2-208ENST00000589216 GPBP1L1Q9HC44 474 aaPredicted RBP12.68□□□□□ -0.38
PTPN2-208ENST00000589216 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
PTPN2-208ENST00000589216 DDX58O95786 925 aaKnown RBP12.67□□□□□ -0.38
PTPN2-208ENST00000589216 CWF19L2Q2TBE0 894 aaKnown RBP12.67□□□□□ -0.38
PTPN2-208ENST00000589216 KSR2Q6VAB6 950 aa12.67□□□□□ -0.38
PTPN2-208ENST00000589216 NLRP3Q96P20 1036 aa12.67□□□□□ -0.38
PTPN2-208ENST00000589216 NMRK2Q9NPI5 230 aa12.67□□□□□ -0.38
PTPN2-208ENST00000589216 WDR90Q96KV7 1748 aa12.67□□□□□ -0.38
PTPN2-208ENST00000589216 KIF3CO14782 793 aa12.66□□□□□ -0.38
PTPN2-208ENST00000589216 SLFN5Q08AF3 891 aa12.66□□□□□ -0.38
PTPN2-208ENST00000589216 CRAMP1Q96RY5 1269 aa12.66□□□□□ -0.38
PTPN2-208ENST00000589216 A0A1B0GUL6 1792 aa12.66□□□□□ -0.38
PTPN2-208ENST00000589216 NEURL1BA8MQ27 555 aa12.65□□□□□ -0.38
PTPN2-208ENST00000589216 E9PSI1 815 aa12.65□□□□□ -0.38
PTPN2-208ENST00000589216 F6X3S4 739 aa12.65□□□□□ -0.38
PTPN2-208ENST00000589216 IRS4O14654 1257 aaPredicted RBP12.65□□□□□ -0.38
PTPN2-208ENST00000589216 ALDH1B1P30837 517 aa12.65□□□□□ -0.38
PTPN2-208ENST00000589216 FKBP4Q02790 459 aaKnown RBP eCLIP12.65□□□□□ -0.38
PTPN2-208ENST00000589216 FKBP5Q13451 457 aaPredicted RBP12.65□□□□□ -0.38
PTPN2-208ENST00000589216 SOGA3Q5TF21 947 aa12.65□□□□□ -0.38
PTPN2-208ENST00000589216 CCDC191Q8NCU4 936 aa12.65□□□□□ -0.38
PTPN2-208ENST00000589216 RBM17Q96I25 401 aaKnown RBP12.65□□□□□ -0.38
PTPN2-208ENST00000589216 ZNF277Q9NRM2 450 aaPredicted RBP12.65□□□□□ -0.38
PTPN2-208ENST00000589216 CWC25Q9NXE8 425 aaPredicted RBP12.65□□□□□ -0.38
PTPN2-208ENST00000589216 ZC3H4Q9UPT8 1303 aaKnown RBP12.64□□□□□ -0.39
PTPN2-208ENST00000589216 PCCAP05165 728 aaPredicted RBP12.64□□□□□ -0.39
PTPN2-208ENST00000589216 ZBTB38Q8NAP3 1195 aaPredicted RBP12.64□□□□□ -0.39
PTPN2-208ENST00000589216 CELF1Q92879 486 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms