RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 BEGAINQ9BUH8 593 aa11.51□□□□□ -0.57
RETREG3-207ENST00000589007 GLIS2Q9BZE0 524 aaPredicted RBP11.51□□□□□ -0.57
RETREG3-207ENST00000589007 DDX60Q8IY21 1712 aaKnown RBP11.51□□□□□ -0.57
RETREG3-207ENST00000589007 RANBP2P49792 3224 aaKnown RBP11.5□□□□□ -0.57
RETREG3-207ENST00000589007 KCNQ3O43525 872 aa11.5□□□□□ -0.57
RETREG3-207ENST00000589007 CELF2O95319 508 aaKnown RBP11.5□□□□□ -0.57
RETREG3-207ENST00000589007 ZNF790Q6PG37 636 aa11.5□□□□□ -0.57
RETREG3-207ENST00000589007 RTKN2Q8IZC4 609 aa11.5□□□□□ -0.57
RETREG3-207ENST00000589007 IL17REQ8NFR9 667 aa11.5□□□□□ -0.57
RETREG3-207ENST00000589007 GPRC5DQ9NZD1 345 aa11.5□□□□□ -0.57
RETREG3-207ENST00000589007 SHTN1A0MZ66 631 aa11.49□□□□□ -0.57
RETREG3-207ENST00000589007 STARD3NLO95772 234 aa11.49□□□□□ -0.57
RETREG3-207ENST00000589007 DZIP3Q86Y13 1208 aaKnown RBP11.49□□□□□ -0.57
RETREG3-207ENST00000589007 COL6A3P12111 3177 aa11.48□□□□□ -0.57
RETREG3-207ENST00000589007 NBPF26B4DH59 902 aa11.48□□□□□ -0.57
RETREG3-207ENST00000589007 NBPF10Q6P3W6 841 aaKnown RBP11.48□□□□□ -0.57
RETREG3-207ENST00000589007 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
RETREG3-207ENST00000589007 TRPM4Q8TD43 1214 aa11.48□□□□□ -0.57
RETREG3-207ENST00000589007 SAGE1Q9NXZ1 904 aa11.48□□□□□ -0.57
RETREG3-207ENST00000589007 GJA3Q9Y6H8 435 aa11.48□□□□□ -0.57
RETREG3-207ENST00000589007 NPC1L1Q9UHC9 1359 aa11.48□□□□□ -0.57
RETREG3-207ENST00000589007 DLG5Q8TDM6 1919 aa11.47□□□□□ -0.57
RETREG3-207ENST00000589007 HMOX1P09601 288 aa11.47□□□□□ -0.57
RETREG3-207ENST00000589007 CLEC4GQ6UXB4 293 aa11.47□□□□□ -0.57
RETREG3-207ENST00000589007 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
RETREG3-207ENST00000589007 NBPF5PQ86XG9 351 aaPredicted RBP11.47□□□□□ -0.57
RETREG3-207ENST00000589007 ADARB2Q9NS39 739 aaKnown RBP11.47□□□□□ -0.57
RETREG3-207ENST00000589007 USP16Q9Y5T5 823 aa11.47□□□□□ -0.57
RETREG3-207ENST00000589007 IBTKQ9P2D0 1353 aaPredicted RBP11.46□□□□□ -0.57
RETREG3-207ENST00000589007 RGL2O15211 777 aa11.46□□□□□ -0.57
RETREG3-207ENST00000589007 NOGQ13253 232 aa11.46□□□□□ -0.57
RETREG3-207ENST00000589007 HLFQ16534 295 aa11.46□□□□□ -0.57
RETREG3-207ENST00000589007 ZNF330Q9Y3S2 320 aaPredicted RBP11.46□□□□□ -0.57
RETREG3-207ENST00000589007 KIF7Q2M1P5 1343 aa11.45□□□□□ -0.58
RETREG3-207ENST00000589007 UBN2Q6ZU65 1347 aa11.45□□□□□ -0.58
RETREG3-207ENST00000589007 LMOD1P29536 600 aaPredicted RBP11.45□□□□□ -0.58
RETREG3-207ENST00000589007 HOXA10P31260 410 aaPredicted RBP11.45□□□□□ -0.58
RETREG3-207ENST00000589007 HABP4Q5JVS0 413 aaKnown RBP11.45□□□□□ -0.58
RETREG3-207ENST00000589007 HPS5Q9UPZ3 1129 aa11.45□□□□□ -0.58
RETREG3-207ENST00000589007 CDHR2Q9BYE9 1310 aa11.44□□□□□ -0.58
RETREG3-207ENST00000589007 EGFRP00533 1210 aa11.44□□□□□ -0.58
RETREG3-207ENST00000589007 GMPSP49915 693 aaPredicted RBP11.44□□□□□ -0.58
RETREG3-207ENST00000589007 FXR1P51114 621 aaKnown RBP eCLIP11.44□□□□□ -0.58
RETREG3-207ENST00000589007 EIF6P56537 245 aaKnown RBP11.44□□□□□ -0.58
RETREG3-207ENST00000589007 CXCL9Q07325 125 aa11.44□□□□□ -0.58
RETREG3-207ENST00000589007 RNF186Q9NXI6 227 aa11.44□□□□□ -0.58
RETREG3-207ENST00000589007 AOC3Q16853 763 aa11.43□□□□□ -0.58
RETREG3-207ENST00000589007 AMER1Q5JTC6 1135 aaPredicted RBP11.43□□□□□ -0.58
RETREG3-207ENST00000589007 CTU1Q7Z7A3 348 aaKnown RBP11.43□□□□□ -0.58
RETREG3-207ENST00000589007 TTC5Q8N0Z6 440 aa11.43□□□□□ -0.58
RETREG3-207ENST00000589007 JDP2Q8WYK2 163 aa11.43□□□□□ -0.58
RETREG3-207ENST00000589007 TEX13AQ9BXU3 409 aaPredicted RBP11.43□□□□□ -0.58
RETREG3-207ENST00000589007 PANK3Q9H999 370 aa11.43□□□□□ -0.58
RETREG3-207ENST00000589007 YDJCA8MPS7 323 aa11.42□□□□□ -0.58
RETREG3-207ENST00000589007 SLC10A3P09131 477 aa11.42□□□□□ -0.58
RETREG3-207ENST00000589007 KIF23Q02241 960 aaPredicted RBP11.42□□□□□ -0.58
RETREG3-207ENST00000589007 NUTM1Q86Y26 1132 aa11.42□□□□□ -0.58
RETREG3-207ENST00000589007 LARGE2Q8N3Y3 721 aa11.42□□□□□ -0.58
RETREG3-207ENST00000589007 FMNL2Q96PY5 1086 aa11.42□□□□□ -0.58
RETREG3-207ENST00000589007 RTFDC1Q9BY42 306 aaPredicted RBP11.42□□□□□ -0.58
RETREG3-207ENST00000589007 NIP7Q9Y221 180 aaKnown RBP eCLIP11.42□□□□□ -0.58
RETREG3-207ENST00000589007 LAMA3Q16787 3333 aa11.41□□□□□ -0.58
RETREG3-207ENST00000589007 ALDH1B1P30837 517 aa11.41□□□□□ -0.58
RETREG3-207ENST00000589007 HUNKP57058 714 aa11.41□□□□□ -0.58
RETREG3-207ENST00000589007 CC2D2BQ6DHV5 1058 aa11.41□□□□□ -0.58
RETREG3-207ENST00000589007 ZC3H15Q8WU90 426 aaKnown RBP11.41□□□□□ -0.58
RETREG3-207ENST00000589007 TRIOBPQ9H2D6 2365 aa11.41□□□□□ -0.58
RETREG3-207ENST00000589007 CEP290O15078 2479 aa11.4□□□□□ -0.58
RETREG3-207ENST00000589007 RGMBQ6NW40 437 aa11.4□□□□□ -0.58
RETREG3-207ENST00000589007 TPTE2Q6XPS3 522 aa11.4□□□□□ -0.58
RETREG3-207ENST00000589007 CSRNP1Q96S65 589 aa11.4□□□□□ -0.58
RETREG3-207ENST00000589007 ZNF408Q9H9D4 720 aa11.4□□□□□ -0.58
RETREG3-207ENST00000589007 A0A0C4DFX4 3053 aa11.4□□□□□ -0.58
RETREG3-207ENST00000589007 CUL9Q8IWT3 2517 aa11.4□□□□□ -0.59
RETREG3-207ENST00000589007 FAM177BA6PVY3 158 aa11.39□□□□□ -0.59
RETREG3-207ENST00000589007 PPEF1O14829 653 aaPredicted RBP11.39□□□□□ -0.59
RETREG3-207ENST00000589007 PPIP5K2O43314 1243 aa11.39□□□□□ -0.59
RETREG3-207ENST00000589007 TRPA1O75762 1119 aa11.39□□□□□ -0.59
RETREG3-207ENST00000589007 NTSR2O95665 410 aa11.39□□□□□ -0.59
RETREG3-207ENST00000589007 MORC1Q86VD1 984 aa11.39□□□□□ -0.59
RETREG3-207ENST00000589007 RASAL3Q86YV0 1011 aa11.39□□□□□ -0.59
RETREG3-207ENST00000589007 NIM1KQ8IY84 436 aa11.39□□□□□ -0.59
RETREG3-207ENST00000589007 CRAMP1Q96RY5 1269 aa11.39□□□□□ -0.59
RETREG3-207ENST00000589007 KIAA0100Q14667 2235 aaKnown RBP11.38□□□□□ -0.59
RETREG3-207ENST00000589007 ADM5C9JUS6 153 aa11.38□□□□□ -0.59
RETREG3-207ENST00000589007 NPHP1O15259 732 aa11.38□□□□□ -0.59
RETREG3-207ENST00000589007 CDC37L1Q7L3B6 337 aa11.38□□□□□ -0.59
RETREG3-207ENST00000589007 ZNRF3Q9ULT6 936 aa11.38□□□□□ -0.59
RETREG3-207ENST00000589007 RTL9Q8NET4 1388 aa11.38□□□□□ -0.59
RETREG3-207ENST00000589007 ABCC4O15439 1325 aa11.37□□□□□ -0.59
RETREG3-207ENST00000589007 ZNF609O15014 1411 aa11.37□□□□□ -0.59
RETREG3-207ENST00000589007 KIAA2012Q0VF49 1180 aa11.37□□□□□ -0.59
RETREG3-207ENST00000589007 USP48Q86UV5 1035 aa11.37□□□□□ -0.59
RETREG3-207ENST00000589007 GBA2Q9HCG7 927 aaPredicted RBP11.37□□□□□ -0.59
RETREG3-207ENST00000589007 ZNF652Q9Y2D9 606 aa11.37□□□□□ -0.59
RETREG3-207ENST00000589007 ASTN2O75129 1339 aaPredicted RBP11.36□□□□□ -0.59
RETREG3-207ENST00000589007 GNAT3A8MTJ3 354 aa11.36□□□□□ -0.59
RETREG3-207ENST00000589007 TEFQ10587 303 aa11.36□□□□□ -0.59
RETREG3-207ENST00000589007 SUSD4Q5VX71 490 aa11.36□□□□□ -0.59
RETREG3-207ENST00000589007 PHACTR3Q96KR7 559 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms