RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 EAF2Q96CJ1 260 aaPredicted RBP18.5■□□□□ 0.55
MBD1-217ENST00000588937 SPATA31A1Q5TZJ5 1347 aa18.49■□□□□ 0.55
MBD1-217ENST00000588937 ATP5J2-PTCD1G3V325 749 aa18.49■□□□□ 0.55
MBD1-217ENST00000588937 GOLGA6L22H0YM25 854 aa18.49■□□□□ 0.55
MBD1-217ENST00000588937 PTCD1O75127 700 aaKnown RBP18.49■□□□□ 0.55
MBD1-217ENST00000588937 CLEC17AQ6ZS10 378 aa18.49■□□□□ 0.55
MBD1-217ENST00000588937 SIL1Q9H173 461 aa18.49■□□□□ 0.55
MBD1-217ENST00000588937 CWC25Q9NXE8 425 aaPredicted RBP18.49■□□□□ 0.55
MBD1-217ENST00000588937 PALD1Q9ULE6 856 aa18.49■□□□□ 0.55
MBD1-217ENST00000588937 TOGARAM1Q9Y4F4 1720 aa18.49■□□□□ 0.55
MBD1-217ENST00000588937 SKOR2Q2VWA4 1001 aaPredicted RBP18.48■□□□□ 0.55
MBD1-217ENST00000588937 VSIG10Q8N0Z9 540 aa18.48■□□□□ 0.55
MBD1-217ENST00000588937 FNBP4Q8N3X1 1017 aaPredicted RBP18.48■□□□□ 0.55
MBD1-217ENST00000588937 SPATA31A5Q5VU36 1347 aa18.48■□□□□ 0.55
MBD1-217ENST00000588937 SPATA31A7Q8IWB4 1347 aa18.48■□□□□ 0.55
MBD1-217ENST00000588937 NUTM2BA6NNL0 878 aaPredicted RBP18.47■□□□□ 0.55
MBD1-217ENST00000588937 NUTM2EB1AL46 878 aaPredicted RBP18.47■□□□□ 0.55
MBD1-217ENST00000588937 H7C1W4 665 aa18.47■□□□□ 0.55
MBD1-217ENST00000588937 RFX5P48382 616 aaPredicted RBP18.47■□□□□ 0.55
MBD1-217ENST00000588937 CASP7P55210 303 aa18.47■□□□□ 0.55
MBD1-217ENST00000588937 CWC27Q6UX04 472 aaKnown RBP18.47■□□□□ 0.55
MBD1-217ENST00000588937 NUTM2AQ8IVF1 878 aaPredicted RBP18.47■□□□□ 0.55
MBD1-217ENST00000588937 LSG1Q9H089 658 aaKnown RBP18.47■□□□□ 0.55
MBD1-217ENST00000588937 CCDC8Q9H0W5 538 aaPredicted RBP18.47■□□□□ 0.55
MBD1-217ENST00000588937 A1BGP04217 495 aa18.47■□□□□ 0.55
MBD1-217ENST00000588937 PTPN12Q05209 780 aaKnown RBP18.47■□□□□ 0.55
MBD1-217ENST00000588937 CCDC191Q8NCU4 936 aa18.47■□□□□ 0.55
MBD1-217ENST00000588937 LRP6O75581 1613 aa18.46■□□□□ 0.55
MBD1-217ENST00000588937 BARGINQ6ZT62 677 aa18.46■□□□□ 0.55
MBD1-217ENST00000588937 TTLL7Q6ZT98 887 aa18.46■□□□□ 0.55
MBD1-217ENST00000588937 IL25Q9H293 177 aa18.46■□□□□ 0.55
MBD1-217ENST00000588937 BCL9LQ86UU0 1499 aa18.46■□□□□ 0.55
MBD1-217ENST00000588937 SSFA2P28290 1259 aa18.45■□□□□ 0.54
MBD1-217ENST00000588937 TMX3Q96JJ7 454 aa18.45■□□□□ 0.54
MBD1-217ENST00000588937 CUL4AQ13619 759 aa18.45■□□□□ 0.54
MBD1-217ENST00000588937 L1TD1Q5T7N2 865 aaKnown RBP18.45■□□□□ 0.54
MBD1-217ENST00000588937 KLHDC4Q8TBB5 520 aa18.45■□□□□ 0.54
MBD1-217ENST00000588937 INTS4Q96HW7 963 aaKnown RBP18.45■□□□□ 0.54
MBD1-217ENST00000588937 CYP2E1P05181 493 aaPredicted RBP18.44■□□□□ 0.54
MBD1-217ENST00000588937 TNNI3KQ59H18 835 aa18.43■□□□□ 0.54
MBD1-217ENST00000588937 JARID2Q92833 1246 aaPredicted RBP18.43■□□□□ 0.54
MBD1-217ENST00000588937 FPGT-TNNI3KV9GXZ4 949 aa18.43■□□□□ 0.54
MBD1-217ENST00000588937 TJP1Q07157 1748 aa18.43■□□□□ 0.54
MBD1-217ENST00000588937 STARD3NLO95772 234 aa18.42■□□□□ 0.54
MBD1-217ENST00000588937 FOXO4P98177 505 aa18.42■□□□□ 0.54
MBD1-217ENST00000588937 VPS72Q15906 364 aa18.42■□□□□ 0.54
MBD1-217ENST00000588937 LMBR1LQ6UX01 489 aa18.42■□□□□ 0.54
MBD1-217ENST00000588937 SNX14Q9Y5W7 946 aa18.42■□□□□ 0.54
MBD1-217ENST00000588937 ITGB4P16144 1822 aa18.42■□□□□ 0.54
MBD1-217ENST00000588937 BAG4O95429 457 aaKnown RBP18.42■□□□□ 0.54
MBD1-217ENST00000588937 ATP5JP18859 108 aa18.42■□□□□ 0.54
MBD1-217ENST00000588937 ZGPATQ8N5A5 531 aaKnown RBP18.42■□□□□ 0.54
MBD1-217ENST00000588937 PIGBQ92521 554 aa18.42■□□□□ 0.54
MBD1-217ENST00000588937 BOLA2Q9H3K6 86 aa18.42■□□□□ 0.54
MBD1-217ENST00000588937 ZBTB3Q9H5J0 574 aa18.42■□□□□ 0.54
MBD1-217ENST00000588937 SNRKQ9NRH2 765 aa18.42■□□□□ 0.54
MBD1-217ENST00000588937 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.42■□□□□ 0.54
MBD1-217ENST00000588937 EXOC5O00471 708 aa18.41■□□□□ 0.54
MBD1-217ENST00000588937 TFCP2Q12800 502 aa18.41■□□□□ 0.54
MBD1-217ENST00000588937 KIF6Q6ZMV9 814 aa18.41■□□□□ 0.54
MBD1-217ENST00000588937 FSD1Q9BTV5 496 aa18.41■□□□□ 0.54
MBD1-217ENST00000588937 ATG3Q9NT62 314 aa18.41■□□□□ 0.54
MBD1-217ENST00000588937 TLR7Q9NYK1 1049 aaKnown RBP18.41■□□□□ 0.54
MBD1-217ENST00000588937 NGLY1Q96IV0 654 aa18.4■□□□□ 0.54
MBD1-217ENST00000588937 CHMP3Q9Y3E7 222 aa18.4■□□□□ 0.54
MBD1-217ENST00000588937 RFX7Q2KHR2 1363 aa18.4■□□□□ 0.54
MBD1-217ENST00000588937 TRIM28Q13263 835 aaKnown RBP18.4■□□□□ 0.54
MBD1-217ENST00000588937 TCIRG1Q13488 830 aa18.4■□□□□ 0.54
MBD1-217ENST00000588937 KCNB2Q92953 911 aa18.4■□□□□ 0.54
MBD1-217ENST00000588937 ISCA1Q9BUE6 129 aa18.4■□□□□ 0.54
MBD1-217ENST00000588937 UPF3BQ9BZI7 483 aaKnown RBP18.4■□□□□ 0.54
MBD1-217ENST00000588937 GPR108Q9NPR9 543 aa18.4■□□□□ 0.54
MBD1-217ENST00000588937 ASAP1Q9ULH1 1129 aa18.39■□□□□ 0.53
MBD1-217ENST00000588937 ISY1Q9ULR0 285 aaKnown RBP18.39■□□□□ 0.53
MBD1-217ENST00000588937 CCDC171Q6TFL3 1326 aa18.39■□□□□ 0.53
MBD1-217ENST00000588937 ZKSCAN1P17029 563 aaPredicted RBP18.38■□□□□ 0.53
MBD1-217ENST00000588937 IL15P40933 162 aaPredicted RBP18.38■□□□□ 0.53
MBD1-217ENST00000588937 NMIQ13287 307 aaPredicted RBP18.38■□□□□ 0.53
MBD1-217ENST00000588937 C8orf37Q96NL8 207 aa18.38■□□□□ 0.53
MBD1-217ENST00000588937 TM6SF1Q9BZW5 370 aa18.38■□□□□ 0.53
MBD1-217ENST00000588937 DBNLQ9UJU6 430 aaKnown RBP18.38■□□□□ 0.53
MBD1-217ENST00000588937 BCL9O00512 1426 aa18.37■□□□□ 0.53
MBD1-217ENST00000588937 GOLGA6L3A6NEY3 463 aa18.37■□□□□ 0.53
MBD1-217ENST00000588937 DNAJC10Q8IXB1 793 aa18.37■□□□□ 0.53
MBD1-217ENST00000588937 PTH1RQ03431 593 aa18.37■□□□□ 0.53
MBD1-217ENST00000588937 TICAM2Q86XR7 235 aa18.37■□□□□ 0.53
MBD1-217ENST00000588937 TTC14Q96N46 770 aa18.37■□□□□ 0.53
MBD1-217ENST00000588937 GZF1Q9H116 711 aaPredicted RBP18.37■□□□□ 0.53
MBD1-217ENST00000588937 CIAO1O76071 339 aa18.36■□□□□ 0.53
MBD1-217ENST00000588937 KCNJ4P48050 445 aa18.36■□□□□ 0.53
MBD1-217ENST00000588937 NECTIN1Q15223 517 aa18.36■□□□□ 0.53
MBD1-217ENST00000588937 HSP90AB3PQ58FF7 597 aa18.36■□□□□ 0.53
MBD1-217ENST00000588937 RASEFQ8IZ41 740 aa18.36■□□□□ 0.53
MBD1-217ENST00000588937 MAP4K1Q92918 833 aa18.36■□□□□ 0.53
MBD1-217ENST00000588937 FBXO3Q9UK99 471 aa18.36■□□□□ 0.53
MBD1-217ENST00000588937 DDB1Q16531 1140 aa18.35■□□□□ 0.53
MBD1-217ENST00000588937 RNF20Q5VTR2 975 aa18.35■□□□□ 0.53
MBD1-217ENST00000588937 PRPF40BQ6NWY9 871 aaKnown RBP18.35■□□□□ 0.53
MBD1-217ENST00000588937 ILDR1Q86SU0 546 aaPredicted RBP18.35■□□□□ 0.53
MBD1-217ENST00000588937 FAM227BQ96M60 508 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms