RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 NUTM1Q86Y26 1132 aa24.1■■□□□ 1.45
CLPTM1-209ENST00000588855 UTP14AQ9BVJ6 771 aaKnown RBP24.1■■□□□ 1.45
CLPTM1-209ENST00000588855 API5Q9BZZ5 524 aaKnown RBP24.1■■□□□ 1.45
CLPTM1-209ENST00000588855 NYXQ9GZU5 481 aa24.1■■□□□ 1.45
CLPTM1-209ENST00000588855 TNRC6CQ9HCJ0 1690 aaKnown RBP24.1■■□□□ 1.45
CLPTM1-209ENST00000588855 BEND3Q5T5X7 828 aa24.1■■□□□ 1.45
CLPTM1-209ENST00000588855 CCDC191Q8NCU4 936 aa24.1■■□□□ 1.45
CLPTM1-209ENST00000588855 LINS1Q8NG48 757 aa24.1■■□□□ 1.45
CLPTM1-209ENST00000588855 ARHGAP45Q92619 1136 aa24.1■■□□□ 1.45
CLPTM1-209ENST00000588855 CWC25Q9NXE8 425 aaPredicted RBP24.1■■□□□ 1.45
CLPTM1-209ENST00000588855 TNNQ9UQP3 1299 aa24.1■■□□□ 1.45
CLPTM1-209ENST00000588855 ABCC12Q96J65 1359 aa24.1■■□□□ 1.45
CLPTM1-209ENST00000588855 FHDC1Q9C0D6 1143 aaPredicted RBP24.09■■□□□ 1.45
CLPTM1-209ENST00000588855 TRMT112Q9UI30 125 aaKnown RBP24.09■■□□□ 1.45
CLPTM1-209ENST00000588855 LAMB2P55268 1798 aa24.08■■□□□ 1.45
CLPTM1-209ENST00000588855 DDX60Q8IY21 1712 aaKnown RBP24.08■■□□□ 1.45
CLPTM1-209ENST00000588855 IPO8O15397 1037 aaKnown RBP24.08■■□□□ 1.45
CLPTM1-209ENST00000588855 TRIM27P14373 513 aa24.08■■□□□ 1.45
CLPTM1-209ENST00000588855 ST5P78524 1137 aa24.08■■□□□ 1.45
CLPTM1-209ENST00000588855 ERFEQ4G0M1 354 aa24.08■■□□□ 1.45
CLPTM1-209ENST00000588855 GTF2E1P29083 439 aaPredicted RBP24.07■■□□□ 1.44
CLPTM1-209ENST00000588855 ZKSCAN2Q63HK3 967 aa24.07■■□□□ 1.44
CLPTM1-209ENST00000588855 ATF7IPQ6VMQ6 1270 aa24.07■■□□□ 1.44
CLPTM1-209ENST00000588855 COL11A2P13942 1736 aaPredicted RBP24.07■■□□□ 1.44
CLPTM1-209ENST00000588855 SYNE4Q8N205 404 aa24.06■■□□□ 1.44
CLPTM1-209ENST00000588855 ABCC4O15439 1325 aa24.06■■□□□ 1.44
CLPTM1-209ENST00000588855 RNF123Q5XPI4 1314 aa24.06■■□□□ 1.44
CLPTM1-209ENST00000588855 SH3TC1Q8TE82 1336 aa24.06■■□□□ 1.44
CLPTM1-209ENST00000588855 RTL5Q5HYW3 569 aaPredicted RBP24.05■■□□□ 1.44
CLPTM1-209ENST00000588855 FAM89AQ96GI7 184 aa24.05■■□□□ 1.44
CLPTM1-209ENST00000588855 SRCIN1Q9C0H9 1055 aa24.05■■□□□ 1.44
CLPTM1-209ENST00000588855 CD2APQ9Y5K6 639 aa24.05■■□□□ 1.44
CLPTM1-209ENST00000588855 GCKRQ14397 625 aa24.05■■□□□ 1.44
CLPTM1-209ENST00000588855 NLGN2Q8NFZ4 835 aa24.04■■□□□ 1.44
CLPTM1-209ENST00000588855 JARID2Q92833 1246 aaPredicted RBP24.04■■□□□ 1.44
CLPTM1-209ENST00000588855 CLUAP1Q96AJ1 413 aa24.04■■□□□ 1.44
CLPTM1-209ENST00000588855 RIC1Q4ADV7 1423 aa24.04■■□□□ 1.44
CLPTM1-209ENST00000588855 DLEC1Q9Y238 1755 aa24.03■■□□□ 1.44
CLPTM1-209ENST00000588855 ALDH1L1O75891 902 aa24.03■■□□□ 1.44
CLPTM1-209ENST00000588855 PCCAP05165 728 aaPredicted RBP24.03■■□□□ 1.44
CLPTM1-209ENST00000588855 ZBTB38Q8NAP3 1195 aaPredicted RBP24.03■■□□□ 1.44
CLPTM1-209ENST00000588855 BRIP1Q9BX63 1249 aa24.03■■□□□ 1.44
CLPTM1-209ENST00000588855 SYT17Q9BSW7 474 aa24.02■■□□□ 1.44
CLPTM1-209ENST00000588855 PLIN1O60240 522 aa24.01■■□□□ 1.43
CLPTM1-209ENST00000588855 MYH3P11055 1940 aa24.01■■□□□ 1.43
CLPTM1-209ENST00000588855 GOLGB1Q14789 3259 aaKnown RBP24.01■■□□□ 1.43
CLPTM1-209ENST00000588855 HCLS1P14317 486 aaPredicted RBP24■■□□□ 1.43
CLPTM1-209ENST00000588855 CCT4P50991 539 aaKnown RBP24■■□□□ 1.43
CLPTM1-209ENST00000588855 BRCA1P38398 1863 aaKnown RBP24■■□□□ 1.43
CLPTM1-209ENST00000588855 IRS4O14654 1257 aaPredicted RBP24■■□□□ 1.43
CLPTM1-209ENST00000588855 SLC10A5Q5PT55 438 aa24■■□□□ 1.43
CLPTM1-209ENST00000588855 UBE3BQ7Z3V4 1068 aa24■■□□□ 1.43
CLPTM1-209ENST00000588855 H7C1W4 665 aa23.99■■□□□ 1.43
CLPTM1-209ENST00000588855 CHRNA5P30532 468 aa23.99■■□□□ 1.43
CLPTM1-209ENST00000588855 PDE6BP35913 854 aa23.99■■□□□ 1.43
CLPTM1-209ENST00000588855 C3orf67Q6ZVT6 689 aa23.99■■□□□ 1.43
CLPTM1-209ENST00000588855 CDHR2Q9BYE9 1310 aa23.98■■□□□ 1.43
CLPTM1-209ENST00000588855 A0A0G2JLW4 131 aa23.98■■□□□ 1.43
CLPTM1-209ENST00000588855 GRM8O00222 908 aa23.98■■□□□ 1.43
CLPTM1-209ENST00000588855 RLBP1P12271 317 aa23.98■■□□□ 1.43
CLPTM1-209ENST00000588855 DPEP1P16444 411 aa23.98■■□□□ 1.43
CLPTM1-209ENST00000588855 CASP7P55210 303 aa23.98■■□□□ 1.43
CLPTM1-209ENST00000588855 TGFB2P61812 414 aa23.98■■□□□ 1.43
CLPTM1-209ENST00000588855 INTS3Q68E01 1043 aaKnown RBP23.98■■□□□ 1.43
CLPTM1-209ENST00000588855 FTSJ3Q8IY81 847 aaKnown RBP23.98■■□□□ 1.43
CLPTM1-209ENST00000588855 DZIP1LQ8IYY4 767 aaKnown RBP23.98■■□□□ 1.43
CLPTM1-209ENST00000588855 CACNA1SQ13698 1873 aa23.97■■□□□ 1.43
CLPTM1-209ENST00000588855 C2CD5Q86YS7 1000 aa23.97■■□□□ 1.43
CLPTM1-209ENST00000588855 TMEM57Q8N5G2 664 aa23.97■■□□□ 1.43
CLPTM1-209ENST00000588855 C9orf78Q9NZ63 289 aaPredicted RBP23.97■■□□□ 1.43
CLPTM1-209ENST00000588855 KLRG2A4D1S0 409 aaPredicted RBP23.95■■□□□ 1.43
CLPTM1-209ENST00000588855 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.95■■□□□ 1.43
CLPTM1-209ENST00000588855 PANK1Q8TE04 598 aa23.95■■□□□ 1.43
CLPTM1-209ENST00000588855 NLRP3Q96P20 1036 aa23.95■■□□□ 1.43
CLPTM1-209ENST00000588855 H0YIN7 160 aa23.94■■□□□ 1.42
CLPTM1-209ENST00000588855 NBPF7P0C2Y1 421 aaPredicted RBP23.94■■□□□ 1.42
CLPTM1-209ENST00000588855 KCNA3P22001 575 aa23.94■■□□□ 1.42
CLPTM1-209ENST00000588855 SRGNP10124 158 aa23.94■■□□□ 1.42
CLPTM1-209ENST00000588855 RRP1P56182 461 aaKnown RBP23.94■■□□□ 1.42
CLPTM1-209ENST00000588855 CRY2Q49AN0 593 aa23.94■■□□□ 1.42
CLPTM1-209ENST00000588855 USP44Q9H0E7 712 aa23.94■■□□□ 1.42
CLPTM1-209ENST00000588855 UTYO14607 1347 aa23.93■■□□□ 1.42
CLPTM1-209ENST00000588855 PDE8AO60658 829 aa23.93■■□□□ 1.42
CLPTM1-209ENST00000588855 WWC3Q9ULE0 1092 aa23.93■■□□□ 1.42
CLPTM1-209ENST00000588855 PDZRN3Q9UPQ7 1066 aa23.93■■□□□ 1.42
CLPTM1-209ENST00000588855 TAF1P21675 1872 aa23.92■■□□□ 1.42
CLPTM1-209ENST00000588855 MS4A1P11836 297 aa23.91■■□□□ 1.42
CLPTM1-209ENST00000588855 HSP90B1P14625 803 aaKnown RBP23.91■■□□□ 1.42
CLPTM1-209ENST00000588855 C20orf194Q5TEA3 1177 aa23.91■■□□□ 1.42
CLPTM1-209ENST00000588855 ITPRIPQ8IWB1 547 aa23.9■■□□□ 1.42
CLPTM1-209ENST00000588855 ZNF622Q969S3 477 aaKnown RBP eCLIP23.9■■□□□ 1.422e-7■■■□□ 18
CLPTM1-209ENST00000588855 MASTLQ96GX5 879 aa23.9■■□□□ 1.42
CLPTM1-209ENST00000588855 MEIS3Q99687 375 aa23.9■■□□□ 1.42
CLPTM1-209ENST00000588855 PLA2G12BQ9BX93 195 aa23.9■■□□□ 1.42
CLPTM1-209ENST00000588855 NPR1P16066 1061 aa23.89■■□□□ 1.42
CLPTM1-209ENST00000588855 CTSWP56202 376 aa23.89■■□□□ 1.42
CLPTM1-209ENST00000588855 SF3B3Q15393 1217 aaKnown RBP23.89■■□□□ 1.42
CLPTM1-209ENST00000588855 RPGRQ92834 1020 aaKnown RBP23.89■■□□□ 1.42
CLPTM1-209ENST00000588855 SUCLG2Q96I99 432 aa23.89■■□□□ 1.42
CLPTM1-209ENST00000588855 SLX4Q8IY92 1834 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms