RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 ZSCAN25Q6NSZ9 544 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 C3orf20Q8ND61 904 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 CNNM3Q8NE01 707 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 ZNF483Q8TF39 744 aaPredicted RBP8.96□□□□□ -0.98
LAMA3-210ENST00000588770 BORCS6Q96GS4 357 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 FMNL2Q96PY5 1086 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 UNC45AQ9H3U1 944 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 ATG3Q9NT62 314 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 IL16Q14005 1332 aa8.96□□□□□ -0.98
LAMA3-210ENST00000588770 SKAP2O75563 359 aaPredicted RBP8.95□□□□□ -0.98
LAMA3-210ENST00000588770 SASH1O94885 1247 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 WHAMMP3Q1A5X7 153 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 FAXDC2Q96IV6 333 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 GDPD2Q9HCC8 539 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 HOOK1Q9UJC3 728 aaKnown RBP8.95□□□□□ -0.98
LAMA3-210ENST00000588770 SOS1Q07889 1333 aaPredicted RBP8.95□□□□□ -0.98
LAMA3-210ENST00000588770 CCT5P48643 541 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 CCDC158Q5M9N0 1113 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 RILPL2Q969X0 211 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 TSC22D3Q99576 134 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 BATF3Q9NR55 127 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 ANKRD30AQ9BXX3 1397 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 GIGYF2Q6Y7W6 1299 aaKnown RBP8.95□□□□□ -0.98
LAMA3-210ENST00000588770 FAM200AQ8TCP9 573 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 CTNNBL1Q8WYA6 563 aaPredicted RBP8.95□□□□□ -0.98
LAMA3-210ENST00000588770 OSBPL9Q96SU4 736 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 EPB41L2O43491 1005 aaKnown RBP8.95□□□□□ -0.98
LAMA3-210ENST00000588770 HSPA4P34932 840 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 GJA8P48165 433 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 GIMAP6Q6P9H5 292 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 CCDC65Q8IXS2 484 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 TRIML1Q8N9V2 468 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 TDRD7Q8NHU6 1098 aaKnown RBP8.95□□□□□ -0.98
LAMA3-210ENST00000588770 FAM169AQ9Y6X4 670 aa8.95□□□□□ -0.98
LAMA3-210ENST00000588770 WDR33Q9C0J8 1336 aaKnown RBP8.95□□□□□ -0.98
LAMA3-210ENST00000588770 LRPPRCP42704 1394 aaKnown RBP8.94□□□□□ -0.98
LAMA3-210ENST00000588770 SMAPO00193 183 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 ZSCAN12O43309 604 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 BUB1BO60566 1050 aaPredicted RBP8.94□□□□□ -0.98
LAMA3-210ENST00000588770 ZNF189O75820 626 aaPredicted RBP8.94□□□□□ -0.98
LAMA3-210ENST00000588770 FCHSD2O94868 740 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 IMPDH2P12268 514 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 TBC1D8BQ0IIM8 1120 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 E2F5Q15329 346 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 SPATA21Q7Z572 469 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 DRAXINQ8NBI3 349 aaPredicted RBP8.94□□□□□ -0.98
LAMA3-210ENST00000588770 TRAIPQ9BWF2 469 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 RANBP17Q9H2T7 1088 aaKnown RBP8.94□□□□□ -0.98
LAMA3-210ENST00000588770 ANO2Q9NQ90 1003 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 KIF27Q86VH2 1401 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 ZRANB2O95218 330 aaKnown RBP eCLIP8.94□□□□□ -0.98
LAMA3-210ENST00000588770 INTS3Q68E01 1043 aaKnown RBP8.94□□□□□ -0.98
LAMA3-210ENST00000588770 KANK1Q14678 1352 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 IPO5O00410 1097 aaKnown RBP8.94□□□□□ -0.98
LAMA3-210ENST00000588770 PYGLP06737 847 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 CCDC80Q76M96 950 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 RBM42Q9BTD8 480 aaKnown RBP8.94□□□□□ -0.98
LAMA3-210ENST00000588770 DNAI2Q9GZS0 605 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 SENP3Q9H4L4 574 aaPredicted RBP8.94□□□□□ -0.98
LAMA3-210ENST00000588770 PDE11AQ9HCR9 933 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 UBAP1Q9NZ09 502 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 RGL1Q9NZL6 768 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 CECR2Q9BXF3 1484 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 ZMYM3Q14202 1370 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 ABCC9O60706 1549 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 ACTN3Q08043 901 aaPredicted RBP8.94□□□□□ -0.98
LAMA3-210ENST00000588770 KCNF1Q9H3M0 494 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 HOMER3Q9NSC5 361 aa8.94□□□□□ -0.98
LAMA3-210ENST00000588770 GPTP24298 496 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 MAP3K11Q16584 847 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 BICC1Q9H694 974 aaKnown RBP8.93□□□□□ -0.98
LAMA3-210ENST00000588770 H2AFXP16104 143 aaPredicted RBP8.93□□□□□ -0.98
LAMA3-210ENST00000588770 KIF5BP33176 963 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 SFSWAPQ12872 951 aaKnown RBP8.93□□□□□ -0.98
LAMA3-210ENST00000588770 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.93□□□□□ -0.98
LAMA3-210ENST00000588770 GPR161Q8N6U8 529 aaKnown RBP8.93□□□□□ -0.98
LAMA3-210ENST00000588770 CD248Q9HCU0 757 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 ORC3Q9UBD5 711 aaPredicted RBP8.93□□□□□ -0.98
LAMA3-210ENST00000588770 FAM184BQ9ULE4 1060 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 FAN1Q9Y2M0 1017 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 CFAP65Q6ZU64 1925 aaKnown RBP8.93□□□□□ -0.98
LAMA3-210ENST00000588770 VCAM1P19320 739 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 MAP7D1Q3KQU3 841 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 ARHGAP22Q7Z5H3 698 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 CARD6Q9BX69 1037 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 UBA5Q9GZZ9 404 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 TMOD4Q9NZQ9 345 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 ELL2O00472 640 aaPredicted RBP8.93□□□□□ -0.98
LAMA3-210ENST00000588770 AKNAD1Q5T1N1 836 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 TMC6Q7Z403 805 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 HOOK3Q86VS8 718 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 EZH1Q92800 747 aaPredicted RBP8.93□□□□□ -0.98
LAMA3-210ENST00000588770 GOLGA1Q92805 767 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 TRIM11Q96F44 468 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 MCM8Q9UJA3 840 aa8.93□□□□□ -0.98
LAMA3-210ENST00000588770 PLEKHH2Q8IVE3 1493 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 GSDMDP57764 484 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 LRRC31Q6UY01 552 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 TATDN2Q93075 761 aa8.92□□□□□ -0.98
LAMA3-210ENST00000588770 RBM33Q96EV2 1170 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms