RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 SLFN5Q08AF3 891 aa24.12■■□□□ 1.45
ERCC1-207ENST00000588738 MASTLQ96GX5 879 aa24.12■■□□□ 1.45
ERCC1-207ENST00000588738 RNF123Q5XPI4 1314 aa24.11■■□□□ 1.45
ERCC1-207ENST00000588738 STYK1Q6J9G0 422 aa24.11■■□□□ 1.45
ERCC1-207ENST00000588738 ARHGAP27Q6ZUM4 889 aa24.1■■□□□ 1.45
ERCC1-207ENST00000588738 CNKSR1Q969H4 720 aa24.1■■□□□ 1.45
ERCC1-207ENST00000588738 ISCA1Q9BUE6 129 aa24.1■■□□□ 1.45
ERCC1-207ENST00000588738 TRMT112Q9UI30 125 aaKnown RBP24.1■■□□□ 1.45
ERCC1-207ENST00000588738 ABCC12Q96J65 1359 aa24.09■■□□□ 1.45
ERCC1-207ENST00000588738 ATP5J2-PTCD1G3V325 749 aa24.09■■□□□ 1.45
ERCC1-207ENST00000588738 NPR1P16066 1061 aa24.09■■□□□ 1.45
ERCC1-207ENST00000588738 TRIM28Q13263 835 aaKnown RBP24.09■■□□□ 1.45
ERCC1-207ENST00000588738 KSR2Q6VAB6 950 aa24.09■■□□□ 1.45
ERCC1-207ENST00000588738 RIC1Q4ADV7 1423 aa24.09■■□□□ 1.45
ERCC1-207ENST00000588738 G2E3Q7L622 706 aa24.08■■□□□ 1.45
ERCC1-207ENST00000588738 CDCA7LQ96GN5 454 aa24.08■■□□□ 1.45
ERCC1-207ENST00000588738 CACNA1SQ13698 1873 aa24.08■■□□□ 1.45
ERCC1-207ENST00000588738 PI4KAP2A4QPH2 592 aa24.07■■□□□ 1.44
ERCC1-207ENST00000588738 SLC10A5Q5PT55 438 aa24.07■■□□□ 1.44
ERCC1-207ENST00000588738 PI4KAP1Q8N8J0 262 aa24.07■■□□□ 1.44
ERCC1-207ENST00000588738 MYD88Q99836 296 aa24.07■■□□□ 1.44
ERCC1-207ENST00000588738 METTL22Q9BUU2 404 aaPredicted RBP24.07■■□□□ 1.44
ERCC1-207ENST00000588738 MAP3K2Q9Y2U5 619 aa24.07■■□□□ 1.44
ERCC1-207ENST00000588738 TNRC6CQ9HCJ0 1690 aaKnown RBP24.07■■□□□ 1.44
ERCC1-207ENST00000588738 FLIIQ13045 1269 aa24.06■■□□□ 1.44
ERCC1-207ENST00000588738 NLRP3Q96P20 1036 aa24.06■■□□□ 1.44
ERCC1-207ENST00000588738 SH3TC1Q8TE82 1336 aa24.06■■□□□ 1.44
ERCC1-207ENST00000588738 ALDH1B1P30837 517 aa24.05■■□□□ 1.44
ERCC1-207ENST00000588738 CRY2Q49AN0 593 aa24.05■■□□□ 1.44
ERCC1-207ENST00000588738 TRMT2AQ8IZ69 625 aaKnown RBP24.05■■□□□ 1.44
ERCC1-207ENST00000588738 HNRNPUQ00839 825 aaKnown RBP eCLIP24.04■■□□□ 1.44
ERCC1-207ENST00000588738 NEXNQ0ZGT2 675 aa24.04■■□□□ 1.44
ERCC1-207ENST00000588738 FKBP5Q13451 457 aaPredicted RBP24.04■■□□□ 1.44
ERCC1-207ENST00000588738 PRPF40BQ6NWY9 871 aaKnown RBP24.04■■□□□ 1.44
ERCC1-207ENST00000588738 RPGRQ92834 1020 aaKnown RBP24.04■■□□□ 1.44
ERCC1-207ENST00000588738 SLX4Q8IY92 1834 aa24.04■■□□□ 1.44
ERCC1-207ENST00000588738 ADCY9O60503 1353 aa24.03■■□□□ 1.44
ERCC1-207ENST00000588738 CCDC191Q8NCU4 936 aa24.03■■□□□ 1.44
ERCC1-207ENST00000588738 ZNF428Q96B54 188 aa24.03■■□□□ 1.44
ERCC1-207ENST00000588738 C21orf2O43822 256 aa24.02■■□□□ 1.44
ERCC1-207ENST00000588738 SYNE4Q8N205 404 aa24.02■■□□□ 1.44
ERCC1-207ENST00000588738 FAM89AQ96GI7 184 aa24.02■■□□□ 1.44
ERCC1-207ENST00000588738 HCLS1P14317 486 aaPredicted RBP24.01■■□□□ 1.43
ERCC1-207ENST00000588738 CWC25Q9NXE8 425 aaPredicted RBP24.01■■□□□ 1.43
ERCC1-207ENST00000588738 ZNF219Q9P2Y4 722 aaPredicted RBP24.01■■□□□ 1.43
ERCC1-207ENST00000588738 HOXA10P31260 410 aaPredicted RBP24■■□□□ 1.43
ERCC1-207ENST00000588738 ZBTB38Q8NAP3 1195 aaPredicted RBP24■■□□□ 1.43
ERCC1-207ENST00000588738 RBM17Q96I25 401 aaKnown RBP24■■□□□ 1.43
ERCC1-207ENST00000588738 LAMB2P55268 1798 aa24■■□□□ 1.43
ERCC1-207ENST00000588738 SOGA3Q5TF21 947 aa23.99■■□□□ 1.43
ERCC1-207ENST00000588738 C3orf67Q6ZVT6 689 aa23.99■■□□□ 1.43
ERCC1-207ENST00000588738 DNAAF4Q8WXU2 420 aa23.99■■□□□ 1.43
ERCC1-207ENST00000588738 DDX60Q8IY21 1712 aaKnown RBP23.98■■□□□ 1.43
ERCC1-207ENST00000588738 HSP90B1P14625 803 aaKnown RBP23.98■■□□□ 1.43
ERCC1-207ENST00000588738 RTL5Q5HYW3 569 aaPredicted RBP23.98■■□□□ 1.43
ERCC1-207ENST00000588738 CRAMP1Q96RY5 1269 aa23.98■■□□□ 1.43
ERCC1-207ENST00000588738 SBF1O95248 1867 aa23.98■■□□□ 1.43
ERCC1-207ENST00000588738 PCCAP05165 728 aaPredicted RBP23.97■■□□□ 1.43
ERCC1-207ENST00000588738 IGKV5-2P06315 115 aa23.97■■□□□ 1.43
ERCC1-207ENST00000588738 CT47B1P0C2W7 299 aaPredicted RBP23.97■■□□□ 1.43
ERCC1-207ENST00000588738 FER1L6Q2WGJ9 1857 aa23.96■■□□□ 1.43
ERCC1-207ENST00000588738 IRS4O14654 1257 aaPredicted RBP23.96■■□□□ 1.43
ERCC1-207ENST00000588738 C7orf43Q8WVR3 580 aa23.96■■□□□ 1.43
ERCC1-207ENST00000588738 NEURL1BA8MQ27 555 aa23.95■■□□□ 1.42
ERCC1-207ENST00000588738 CWF19L2Q2TBE0 894 aaKnown RBP23.95■■□□□ 1.42
ERCC1-207ENST00000588738 CCDC88AQ3V6T2 1871 aa23.94■■□□□ 1.42
ERCC1-207ENST00000588738 RASSF7Q02833 373 aa23.94■■□□□ 1.42
ERCC1-207ENST00000588738 ALDH1L2Q3SY69 923 aa23.94■■□□□ 1.42
ERCC1-207ENST00000588738 CCDC93Q567U6 631 aa23.94■■□□□ 1.42
ERCC1-207ENST00000588738 C9orf131Q5VYM1 1079 aa23.94■■□□□ 1.42
ERCC1-207ENST00000588738 DDX46Q7L014 1031 aaKnown RBP23.94■■□□□ 1.42
ERCC1-207ENST00000588738 MRPL50Q8N5N7 158 aaKnown RBP23.94■■□□□ 1.42
ERCC1-207ENST00000588738 ZNF784Q8NCA9 323 aaPredicted RBP23.94■■□□□ 1.42
ERCC1-207ENST00000588738 LINS1Q8NG48 757 aa23.94■■□□□ 1.42
ERCC1-207ENST00000588738 NFKBIEO00221 500 aa23.93■■□□□ 1.42
ERCC1-207ENST00000588738 SSH1Q8WYL5 1049 aa23.93■■□□□ 1.42
ERCC1-207ENST00000588738 F6X3S4 739 aa23.92■■□□□ 1.42
ERCC1-207ENST00000588738 LMNB1P20700 586 aa23.92■■□□□ 1.42
ERCC1-207ENST00000588738 SF3B3Q15393 1217 aaKnown RBP23.92■■□□□ 1.42
ERCC1-207ENST00000588738 RNF181Q9P0P0 153 aa23.92■■□□□ 1.42
ERCC1-207ENST00000588738 CC2D2BQ6DHV5 1058 aa23.91■■□□□ 1.42
ERCC1-207ENST00000588738 RTKN2Q8IZC4 609 aa23.91■■□□□ 1.42
ERCC1-207ENST00000588738 JARID2Q92833 1246 aaPredicted RBP23.91■■□□□ 1.42
ERCC1-207ENST00000588738 TAOK3Q9H2K8 898 aa23.91■■□□□ 1.42
ERCC1-207ENST00000588738 ABCC4O15439 1325 aa23.9■■□□□ 1.42
ERCC1-207ENST00000588738 CDHR2Q9BYE9 1310 aa23.9■■□□□ 1.42
ERCC1-207ENST00000588738 LTBP3Q9NS15 1303 aa23.9■■□□□ 1.42
ERCC1-207ENST00000588738 PPEF1O14829 653 aaPredicted RBP23.9■■□□□ 1.42
ERCC1-207ENST00000588738 PDE8AO60658 829 aa23.9■■□□□ 1.42
ERCC1-207ENST00000588738 BBOX1O75936 387 aa23.9■■□□□ 1.42
ERCC1-207ENST00000588738 GCKRQ14397 625 aa23.9■■□□□ 1.42
ERCC1-207ENST00000588738 TMX4Q9H1E5 349 aaPredicted RBP23.9■■□□□ 1.42
ERCC1-207ENST00000588738 SMC4Q9NTJ3 1288 aa23.9■■□□□ 1.42
ERCC1-207ENST00000588738 PTPRCP08575 1304 aa23.89■■□□□ 1.42
ERCC1-207ENST00000588738 ZBED9Q6R2W3 1325 aa23.89■■□□□ 1.42
ERCC1-207ENST00000588738 GRIPAP1Q4V328 841 aa23.89■■□□□ 1.41
ERCC1-207ENST00000588738 OLFM4Q6UX06 510 aa23.89■■□□□ 1.41
ERCC1-207ENST00000588738 BCL2L13Q9BXK5 485 aa23.89■■□□□ 1.41
ERCC1-207ENST00000588738 TAF1P21675 1872 aa23.88■■□□□ 1.41
ERCC1-207ENST00000588738 H7C1W4 665 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms