RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 NTSR2O95665 410 aa18.36■□□□□ 0.53
CLPTM1-208ENST00000588274 SCNN1DP51172 638 aa18.36■□□□□ 0.53
CLPTM1-208ENST00000588274 MAP1SQ66K74 1059 aaPredicted RBP18.36■□□□□ 0.53
CLPTM1-208ENST00000588274 THUMPD2Q9BTF0 503 aaKnown RBP18.36■□□□□ 0.53
CLPTM1-208ENST00000588274 WBP1LQ9NX94 342 aa18.36■□□□□ 0.53
CLPTM1-208ENST00000588274 SUSD4Q5VX71 490 aa18.35■□□□□ 0.53
CLPTM1-208ENST00000588274 ZNF34Q8IZ26 560 aa18.35■□□□□ 0.53
CLPTM1-208ENST00000588274 PRDM10Q9NQV6 1147 aa18.35■□□□□ 0.53
CLPTM1-208ENST00000588274 PNMA8AQ86V59 439 aaPredicted RBP18.34■□□□□ 0.53
CLPTM1-208ENST00000588274 CNTROBQ8N137 903 aa18.34■□□□□ 0.53
CLPTM1-208ENST00000588274 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
CLPTM1-208ENST00000588274 LAMB2P55268 1798 aa18.33■□□□□ 0.53
CLPTM1-208ENST00000588274 GPTP24298 496 aa18.33■□□□□ 0.52
CLPTM1-208ENST00000588274 PDIA6Q15084 440 aa18.33■□□□□ 0.52
CLPTM1-208ENST00000588274 NGEFQ8N5V2 710 aa18.33■□□□□ 0.52
CLPTM1-208ENST00000588274 PNISRQ8TF01 805 aaKnown RBP18.33■□□□□ 0.52
CLPTM1-208ENST00000588274 ZBTB3Q9H5J0 574 aa18.33■□□□□ 0.52
CLPTM1-208ENST00000588274 FMR1Q06787 632 aaKnown RBP eCLIP18.32■□□□□ 0.52
CLPTM1-208ENST00000588274 NFE2L2Q16236 605 aa18.32■□□□□ 0.52
CLPTM1-208ENST00000588274 CC2D2BQ6DHV5 1058 aa18.32■□□□□ 0.52
CLPTM1-208ENST00000588274 ANKRD36CQ5JPF3 1778 aa18.32■□□□□ 0.52
CLPTM1-208ENST00000588274 ERBB4Q15303 1308 aa18.31■□□□□ 0.52
CLPTM1-208ENST00000588274 DUOX1Q9NRD9 1551 aa18.31■□□□□ 0.52
CLPTM1-208ENST00000588274 MYL6BP14649 208 aa18.31■□□□□ 0.52
CLPTM1-208ENST00000588274 EPS15P42566 896 aa18.31■□□□□ 0.52
CLPTM1-208ENST00000588274 GIGYF2Q6Y7W6 1299 aaKnown RBP18.31■□□□□ 0.52
CLPTM1-208ENST00000588274 CRAMP1Q96RY5 1269 aa18.31■□□□□ 0.52
CLPTM1-208ENST00000588274 RRP7AQ9Y3A4 280 aaKnown RBP18.31■□□□□ 0.52
CLPTM1-208ENST00000588274 PPEF1O14829 653 aaPredicted RBP18.3■□□□□ 0.52
CLPTM1-208ENST00000588274 HSPA8P11142 646 aaKnown RBP18.3■□□□□ 0.52
CLPTM1-208ENST00000588274 GTF2E1P29083 439 aaPredicted RBP18.3■□□□□ 0.52
CLPTM1-208ENST00000588274 CTCFP49711 727 aaPredicted RBP18.3■□□□□ 0.52
CLPTM1-208ENST00000588274 KIF6Q6ZMV9 814 aa18.3■□□□□ 0.52
CLPTM1-208ENST00000588274 DDX21Q9NR30 783 aaKnown RBP eCLIP18.3■□□□□ 0.52
CLPTM1-208ENST00000588274 PROSER3Q2NL68 480 aa18.29■□□□□ 0.52
CLPTM1-208ENST00000588274 JDP2Q8WYK2 163 aa18.29■□□□□ 0.52
CLPTM1-208ENST00000588274 RPGRQ92834 1020 aaKnown RBP18.29■□□□□ 0.52
CLPTM1-208ENST00000588274 CLEC11AQ9Y240 323 aa18.29■□□□□ 0.52
CLPTM1-208ENST00000588274 LRRC37AA6NMS7 1700 aa18.29■□□□□ 0.52
CLPTM1-208ENST00000588274 WDR33Q9C0J8 1336 aaKnown RBP18.28■□□□□ 0.52
CLPTM1-208ENST00000588274 LBX1P52954 281 aa18.28■□□□□ 0.52
CLPTM1-208ENST00000588274 ABCC4O15439 1325 aa18.27■□□□□ 0.52
CLPTM1-208ENST00000588274 TRPM7Q96QT4 1865 aa18.27■□□□□ 0.52
CLPTM1-208ENST00000588274 DEFB115Q30KQ5 88 aa18.27■□□□□ 0.52
CLPTM1-208ENST00000588274 GRIPAP1Q4V328 841 aa18.27■□□□□ 0.52
CLPTM1-208ENST00000588274 CST9Q5W186 159 aa18.27■□□□□ 0.52
CLPTM1-208ENST00000588274 LARGE2Q8N3Y3 721 aa18.27■□□□□ 0.52
CLPTM1-208ENST00000588274 GJA3Q9Y6H8 435 aa18.27■□□□□ 0.52
CLPTM1-208ENST00000588274 COL4A1P02462 1669 aa18.27■□□□□ 0.52
CLPTM1-208ENST00000588274 EIF6P56537 245 aaKnown RBP18.26■□□□□ 0.51
CLPTM1-208ENST00000588274 SLC10A5Q5PT55 438 aa18.26■□□□□ 0.51
CLPTM1-208ENST00000588274 RTFDC1Q9BY42 306 aaPredicted RBP18.26■□□□□ 0.51
CLPTM1-208ENST00000588274 TRAF5O00463 557 aa18.25■□□□□ 0.51
CLPTM1-208ENST00000588274 AOC3Q16853 763 aa18.25■□□□□ 0.51
CLPTM1-208ENST00000588274 PARP10Q53GL7 1025 aa18.25■□□□□ 0.51
CLPTM1-208ENST00000588274 AIDAQ96BJ3 306 aa18.25■□□□□ 0.51
CLPTM1-208ENST00000588274 RBM17Q96I25 401 aaKnown RBP18.25■□□□□ 0.51
CLPTM1-208ENST00000588274 ATP6V0A2Q9Y487 856 aa18.25■□□□□ 0.51
CLPTM1-208ENST00000588274 ANXA1P04083 346 aa18.24■□□□□ 0.51
CLPTM1-208ENST00000588274 USP50Q70EL3 339 aaPredicted RBP18.24■□□□□ 0.51
CLPTM1-208ENST00000588274 GPRC5DQ9NZD1 345 aa18.24■□□□□ 0.51
CLPTM1-208ENST00000588274 DDX60Q8IY21 1712 aaKnown RBP18.23■□□□□ 0.51
CLPTM1-208ENST00000588274 TCERG1O14776 1098 aaKnown RBP18.23■□□□□ 0.51
CLPTM1-208ENST00000588274 PPIP5K2O43314 1243 aa18.23■□□□□ 0.51
CLPTM1-208ENST00000588274 LMOD1P29536 600 aaPredicted RBP18.23■□□□□ 0.51
CLPTM1-208ENST00000588274 ABT1Q9ULW3 272 aaKnown RBP18.23■□□□□ 0.51
CLPTM1-208ENST00000588274 CXCL9Q07325 125 aa18.22■□□□□ 0.51
CLPTM1-208ENST00000588274 PPP1R42Q7Z4L9 355 aa18.22■□□□□ 0.51
CLPTM1-208ENST00000588274 NIM1KQ8IY84 436 aa18.22■□□□□ 0.51
CLPTM1-208ENST00000588274 CAPNS2Q96L46 248 aa18.22■□□□□ 0.51
CLPTM1-208ENST00000588274 VPS33BQ9H267 617 aa18.22■□□□□ 0.51
CLPTM1-208ENST00000588274 TSPYL4Q9UJ04 414 aa18.22■□□□□ 0.51
CLPTM1-208ENST00000588274 TLL2Q9Y6L7 1015 aa18.22■□□□□ 0.51
CLPTM1-208ENST00000588274 TAF1P21675 1872 aa18.22■□□□□ 0.51
CLPTM1-208ENST00000588274 MAP2K1Q02750 393 aaPredicted RBP18.21■□□□□ 0.51
CLPTM1-208ENST00000588274 CYP4F22Q6NT55 531 aa18.21■□□□□ 0.51
CLPTM1-208ENST00000588274 UTP14AQ9BVJ6 771 aaKnown RBP18.21■□□□□ 0.51
CLPTM1-208ENST00000588274 NLRP10Q86W26 655 aa18.2■□□□□ 0.5
CLPTM1-208ENST00000588274 NLRP3Q96P20 1036 aa18.2■□□□□ 0.5
CLPTM1-208ENST00000588274 ADARB2Q9NS39 739 aaKnown RBP18.2■□□□□ 0.5
CLPTM1-208ENST00000588274 PGAP2Q9UHJ9 254 aa18.2■□□□□ 0.5
CLPTM1-208ENST00000588274 ZNRF3Q9ULT6 936 aa18.2■□□□□ 0.5
CLPTM1-208ENST00000588274 MAPK8IP3Q9UPT6 1336 aa18.2■□□□□ 0.5
CLPTM1-208ENST00000588274 NEFMP07197 916 aa18.19■□□□□ 0.5
CLPTM1-208ENST00000588274 GMPSP49915 693 aaPredicted RBP18.19■□□□□ 0.5
CLPTM1-208ENST00000588274 HIRAP54198 1017 aaPredicted RBP18.19■□□□□ 0.5
CLPTM1-208ENST00000588274 KIAA2012Q0VF49 1180 aa18.19■□□□□ 0.5
CLPTM1-208ENST00000588274 ABHD8Q96I13 439 aa18.19■□□□□ 0.5
CLPTM1-208ENST00000588274 BABAM1Q9NWV8 329 aa18.19■□□□□ 0.5
CLPTM1-208ENST00000588274 CDHR2Q9BYE9 1310 aa18.19■□□□□ 0.5
CLPTM1-208ENST00000588274 YDJCA8MPS7 323 aa18.18■□□□□ 0.5
CLPTM1-208ENST00000588274 HCLS1P14317 486 aaPredicted RBP18.18■□□□□ 0.5
CLPTM1-208ENST00000588274 EIF2S2P20042 333 aaKnown RBP18.18■□□□□ 0.5
CLPTM1-208ENST00000588274 KRT24Q2M2I5 525 aa18.18■□□□□ 0.5
CLPTM1-208ENST00000588274 SAPCD2Q86UD0 394 aa18.18■□□□□ 0.5
CLPTM1-208ENST00000588274 SHTN1A0MZ66 631 aa18.17■□□□□ 0.5
CLPTM1-208ENST00000588274 COPS6Q7L5N1 327 aa18.17■□□□□ 0.5
CLPTM1-208ENST00000588274 SP8Q8IXZ3 490 aa18.17■□□□□ 0.5
CLPTM1-208ENST00000588274 TRPM4Q8TD43 1214 aa18.17■□□□□ 0.5
CLPTM1-208ENST00000588274 XAGE3Q8WTP9 111 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms