RNA–Protein interactions for RNA: ENST00000587987.5

U2AF1L4-208, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 1 (best)

Gene U2AF1L4, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-208	ENST00000587987	SSH1	Q8WYL5	1049 aa		12.07	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	ARHGAP45	Q92619	1136 aa		12.07	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	NECTIN2	Q92692	538 aa		12.07	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	CHPF2	Q9P2E5	772 aa		12.07	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	DICER1	Q9UPY3	1922 aa	Known RBP	12.07	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	LAMB4	A4D0S4	1761 aa		12.07	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	RGL2	O15211	777 aa		12.06	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	MS4A1	P11836	297 aa		12.06	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	EIF5	P55010	431 aa	Known RBP	12.06	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	CCDC24	Q8N4L8	307 aa		12.06	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	AIDA	Q96BJ3	306 aa		12.06	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	TAOK3	Q9H2K8	898 aa		12.06	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	PTPRC	P08575	1304 aa		12.06	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	KIF16B	Q96L93	1317 aa		12.06	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	FER1L6	Q2WGJ9	1857 aa		12.06	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	CNTNAP1	P78357	1384 aa		12.05	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	NBPF26	B4DH59	902 aa		12.05	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	DDN	O94850	711 aa	Predicted RBP	12.05	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	MYL6B	P14649	208 aa		12.05	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	NBPF10	Q6P3W6	841 aa	Known RBP	12.05	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	NBPF15	Q8N660	670 aa		12.05	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.05	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	SCN7A	Q01118	1682 aa		12.05	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	PDE6B	P35913	854 aa		12.04	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	TBC1D9B	Q66K14	1250 aa		12.04	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	KIF6	Q6ZMV9	814 aa		12.04	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	COPS6	Q7L5N1	327 aa		12.04	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	PRDM10	Q9NQV6	1147 aa		12.04	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	CACNA1S	Q13698	1873 aa		12.04	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	ERVV-1	B6SEH8	477 aa		12.03	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	NPHP1	O15259	732 aa		12.03	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	BCAR3	O75815	825 aa		12.03	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	CTCF	P49711	727 aa	Predicted RBP	12.03	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	FLII	Q13045	1269 aa		12.03	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	PRR5L	Q6MZQ0	368 aa		12.03	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	ANKRD13D	Q6ZTN6	518 aa		12.03	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	LRP10	Q7Z4F1	713 aa		12.03	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	BRIP1	Q9BX63	1249 aa		12.03	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	API5	Q9BZZ5	524 aa	Known RBP	12.03	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	PDZRN3	Q9UPQ7	1066 aa		12.03	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	LTBP3	Q9NS15	1303 aa		12.03	□□□□□ -0.48
U2AF1L4-208	ENST00000587987	IQCA1L	A6NCM1	817 aa		12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	TCERG1	O14776	1098 aa	Known RBP	12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	FKBP5	Q13451	457 aa	Predicted RBP	12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	PROSER3	Q2NL68	480 aa		12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	HSP90AB3P	Q58FF7	597 aa		12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	ZKSCAN2	Q63HK3	967 aa		12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	CLEC4G	Q6UXB4	293 aa		12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	KSR2	Q6VAB6	950 aa		12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	LDHD	Q86WU2	507 aa		12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	DZIP3	Q86Y13	1208 aa	Known RBP	12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	PLBD2	Q8NHP8	589 aa		12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	XAGE3	Q8WTP9	111 aa		12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	PHAX	Q9H814	394 aa	Known RBP	12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	NOB1	Q9ULX3	412 aa	Known RBP	12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	ZNF652	Q9Y2D9	606 aa		12.02	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	VEGFB	P49765	207 aa		12.01	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	AIMP1	Q12904	312 aa	Known RBP	12.01	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	EAPP	Q56P03	285 aa	Predicted RBP	12.01	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	PRPF40B	Q6NWY9	871 aa	Known RBP	12.01	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	ATF7IP	Q6VMQ6	1270 aa		12.01	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	RIC3	Q7Z5B4	369 aa		12.01	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	CNBD1	Q8NA66	436 aa		12.01	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	CNKSR1	Q969H4	720 aa		12.01	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	BCL2L13	Q9BXK5	485 aa		12.01	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	TBC1D2B	Q9UPU7	963 aa		12.01	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	SLX4	Q8IY92	1834 aa		12.01	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	PASK	Q96RG2	1323 aa		12.01	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	TMEM88B	A6NKF7	163 aa		12	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	ANXA1	P04083	346 aa		12	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	PIP4K2A	P48426	406 aa	Predicted RBP	12	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	LBX1	P52954	281 aa		12	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	ST5	P78524	1137 aa		12	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	NEXN	Q0ZGT2	675 aa		12	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	SOGA3	Q5TF21	947 aa		12	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	STYK1	Q6J9G0	422 aa		12	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	G2E3	Q7L622	706 aa		12	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	FRAT1	Q92837	279 aa	Predicted RBP	12	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	TAF1D	Q9H5J8	278 aa	Predicted RBP	12	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	MAP3K15	Q6ZN16	1313 aa		12	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	ARFGEF2	Q9Y6D5	1785 aa		12	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	SCN4A	P35499	1836 aa		12	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	PI4KAP2	A4QPH2	592 aa		11.99	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	SLC34A2	O95436	690 aa		11.99	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	PDE3A	Q14432	1141 aa		11.99	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.99	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	PI4KAP1	Q8N8J0	262 aa		11.99	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	SETDB2	Q96T68	719 aa		11.99	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	CLEC11A	Q9Y240	323 aa		11.99	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	ZNF541	Q9H0D2	1346 aa		11.98	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	SRGN	P10124	158 aa		11.98	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	TTLL7	Q6ZT98	887 aa		11.98	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	DNAAF4	Q8WXU2	420 aa		11.98	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	MASTL	Q96GX5	879 aa		11.98	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.98	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	METTL22	Q9BUU2	404 aa	Predicted RBP	11.98	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	CHMP4B	Q9H444	224 aa	Known RBP	11.98	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	WBP1L	Q9NX94	342 aa		11.98	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	MAP3K2	Q9Y2U5	619 aa		11.98	□□□□□ -0.49
U2AF1L4-208	ENST00000587987	RNF123	Q5XPI4	1314 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms