RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 RTF1Q92541 710 aaKnown RBP20.68■□□□□ 0.9
NCLN-203ENST00000587740 DDX21Q9NR30 783 aaKnown RBP eCLIP20.68■□□□□ 0.9
NCLN-203ENST00000587740 ABHD8Q96I13 439 aa20.67■□□□□ 0.9
NCLN-203ENST00000587740 MIS18AQ9NYP9 233 aa20.67■□□□□ 0.9
NCLN-203ENST00000587740 ABT1Q9ULW3 272 aaKnown RBP20.67■□□□□ 0.9
NCLN-203ENST00000587740 GTF2E1P29083 439 aaPredicted RBP20.66■□□□□ 0.9
NCLN-203ENST00000587740 EPS15P42566 896 aa20.66■□□□□ 0.9
NCLN-203ENST00000587740 JDP2Q8WYK2 163 aa20.66■□□□□ 0.9
NCLN-203ENST00000587740 GJA3Q9Y6H8 435 aa20.66■□□□□ 0.9
NCLN-203ENST00000587740 NUP98P52948 1817 aa20.65■□□□□ 0.9
NCLN-203ENST00000587740 SCNN1DP51172 638 aa20.65■□□□□ 0.9
NCLN-203ENST00000587740 MAP2K1Q02750 393 aaPredicted RBP20.65■□□□□ 0.9
NCLN-203ENST00000587740 HOXA10P31260 410 aaPredicted RBP20.64■□□□□ 0.89
NCLN-203ENST00000587740 TAF7Q15545 349 aaPredicted RBP20.64■□□□□ 0.89
NCLN-203ENST00000587740 NGEFQ8N5V2 710 aa20.64■□□□□ 0.89
NCLN-203ENST00000587740 PNNQ9H307 717 aaKnown RBP20.64■□□□□ 0.89
NCLN-203ENST00000587740 ERVV-1B6SEH8 477 aa20.63■□□□□ 0.89
NCLN-203ENST00000587740 HTATSF1O43719 755 aaKnown RBP20.63■□□□□ 0.89
NCLN-203ENST00000587740 EIF6P56537 245 aaKnown RBP20.63■□□□□ 0.89
NCLN-203ENST00000587740 WDR43Q15061 677 aaKnown RBP eCLIP20.63■□□□□ 0.896e-7■■■■□ 23.5
NCLN-203ENST00000587740 CC2D2BQ6DHV5 1058 aa20.63■□□□□ 0.89
NCLN-203ENST00000587740 LAMB4A4D0S4 1761 aa20.62■□□□□ 0.89
NCLN-203ENST00000587740 UBN2Q6ZU65 1347 aa20.62■□□□□ 0.89
NCLN-203ENST00000587740 NEFMP07197 916 aa20.62■□□□□ 0.89
NCLN-203ENST00000587740 CST9Q5W186 159 aa20.62■□□□□ 0.89
NCLN-203ENST00000587740 TTLL7Q6ZT98 887 aa20.62■□□□□ 0.89
NCLN-203ENST00000587740 NYXQ9GZU5 481 aa20.62■□□□□ 0.89
NCLN-203ENST00000587740 THSD7BQ9C0I4 1608 aa20.61■□□□□ 0.89
NCLN-203ENST00000587740 MAP3K15Q6ZN16 1313 aa20.61■□□□□ 0.89
NCLN-203ENST00000587740 TRAF5O00463 557 aa20.61■□□□□ 0.89
NCLN-203ENST00000587740 CYP4F22Q6NT55 531 aa20.61■□□□□ 0.89
NCLN-203ENST00000587740 LARGE2Q8N3Y3 721 aa20.61■□□□□ 0.89
NCLN-203ENST00000587740 CAPNS2Q96L46 248 aa20.61■□□□□ 0.89
NCLN-203ENST00000587740 GPTP24298 496 aa20.6■□□□□ 0.89
NCLN-203ENST00000587740 LMOD1P29536 600 aaPredicted RBP20.6■□□□□ 0.89
NCLN-203ENST00000587740 FAM161AQ3B820 660 aa20.6■□□□□ 0.89
NCLN-203ENST00000587740 SUSD4Q5VX71 490 aa20.6■□□□□ 0.89
NCLN-203ENST00000587740 C3orf67Q6ZVT6 689 aa20.6■□□□□ 0.89
NCLN-203ENST00000587740 RPGRQ92834 1020 aaKnown RBP20.6■□□□□ 0.89
NCLN-203ENST00000587740 TRPM7Q96QT4 1865 aa20.6■□□□□ 0.89
NCLN-203ENST00000587740 RIC1Q4ADV7 1423 aa20.6■□□□□ 0.89
NCLN-203ENST00000587740 DLG5Q8TDM6 1919 aa20.59■□□□□ 0.89
NCLN-203ENST00000587740 TCERG1O14776 1098 aaKnown RBP20.59■□□□□ 0.89
NCLN-203ENST00000587740 RRP7AQ9Y3A4 280 aaKnown RBP20.59■□□□□ 0.89
NCLN-203ENST00000587740 CCDC184Q52MB2 194 aa20.58■□□□□ 0.89
NCLN-203ENST00000587740 DIEXFQ68CQ4 756 aaKnown RBP20.58■□□□□ 0.89
NCLN-203ENST00000587740 USP50Q70EL3 339 aaPredicted RBP20.58■□□□□ 0.89
NCLN-203ENST00000587740 GPR101Q96P66 508 aaPredicted RBP20.58■□□□□ 0.89
NCLN-203ENST00000587740 CRAMP1Q96RY5 1269 aa20.58■□□□□ 0.89
NCLN-203ENST00000587740 MRS2Q9HD23 443 aa20.58■□□□□ 0.89
NCLN-203ENST00000587740 IBTKQ9P2D0 1353 aaPredicted RBP20.58■□□□□ 0.88
NCLN-203ENST00000587740 KDM3BQ7LBC6 1761 aa20.57■□□□□ 0.88
NCLN-203ENST00000587740 SLC34A2O95436 690 aa20.57■□□□□ 0.88
NCLN-203ENST00000587740 EIF4A1P60842 406 aaKnown RBP20.57■□□□□ 0.88
NCLN-203ENST00000587740 GRM1Q13255 1194 aa20.57■□□□□ 0.88
NCLN-203ENST00000587740 PAXIP1Q6ZW49 1069 aaPredicted RBP20.57■□□□□ 0.88
NCLN-203ENST00000587740 ZNF34Q8IZ26 560 aa20.57■□□□□ 0.88
NCLN-203ENST00000587740 ZBTB3Q9H5J0 574 aa20.57■□□□□ 0.88
NCLN-203ENST00000587740 TLL2Q9Y6L7 1015 aa20.57■□□□□ 0.88
NCLN-203ENST00000587740 MAPK8IP3Q9UPT6 1336 aa20.56■□□□□ 0.88
NCLN-203ENST00000587740 PPEF1O14829 653 aaPredicted RBP20.56■□□□□ 0.88
NCLN-203ENST00000587740 NTSR2O95665 410 aa20.56■□□□□ 0.88
NCLN-203ENST00000587740 MYL6BP14649 208 aa20.56■□□□□ 0.88
NCLN-203ENST00000587740 ECE1P42892 770 aa20.56■□□□□ 0.88
NCLN-203ENST00000587740 GRIPAP1Q4V328 841 aa20.56■□□□□ 0.88
NCLN-203ENST00000587740 RBM17Q96I25 401 aaKnown RBP20.56■□□□□ 0.88
NCLN-203ENST00000587740 PLEKHF1Q96S99 279 aa20.56■□□□□ 0.88
NCLN-203ENST00000587740 AOC2O75106 756 aa20.55■□□□□ 0.88
NCLN-203ENST00000587740 KIF6Q6ZMV9 814 aa20.55■□□□□ 0.88
NCLN-203ENST00000587740 NIM1KQ8IY84 436 aa20.55■□□□□ 0.88
NCLN-203ENST00000587740 TSKSQ9UJT2 592 aa20.55■□□□□ 0.88
NCLN-203ENST00000587740 ADAMTS8Q9UP79 889 aa20.55■□□□□ 0.88
NCLN-203ENST00000587740 PPIP5K2O43314 1243 aa20.54■□□□□ 0.88
NCLN-203ENST00000587740 AOC3Q16853 763 aa20.54■□□□□ 0.88
NCLN-203ENST00000587740 THUMPD2Q9BTF0 503 aaKnown RBP20.54■□□□□ 0.88
NCLN-203ENST00000587740 GPRC5DQ9NZD1 345 aa20.54■□□□□ 0.88
NCLN-203ENST00000587740 CXCL9Q07325 125 aa20.53■□□□□ 0.88
NCLN-203ENST00000587740 GIGYF2Q6Y7W6 1299 aaKnown RBP20.53■□□□□ 0.88
NCLN-203ENST00000587740 BEGAINQ9BUH8 593 aa20.53■□□□□ 0.88
NCLN-203ENST00000587740 ADARB2Q9NS39 739 aaKnown RBP20.53■□□□□ 0.88
NCLN-203ENST00000587740 CCDC85CA6NKD9 419 aa20.52■□□□□ 0.88
NCLN-203ENST00000587740 LRP10Q7Z4F1 713 aa20.52■□□□□ 0.88
NCLN-203ENST00000587740 SAPCD2Q86UD0 394 aa20.52■□□□□ 0.88
NCLN-203ENST00000587740 PNISRQ8TF01 805 aaKnown RBP20.52■□□□□ 0.88
NCLN-203ENST00000587740 MAP2K2P36507 400 aa20.51■□□□□ 0.87
NCLN-203ENST00000587740 RGS19P49795 217 aa20.51■□□□□ 0.87
NCLN-203ENST00000587740 CCDC146Q8IYE0 955 aa20.51■□□□□ 0.87
NCLN-203ENST00000587740 ATP6V0A2Q9Y487 856 aa20.51■□□□□ 0.87
NCLN-203ENST00000587740 CASP8AP2Q9UKL3 1982 aa20.5■□□□□ 0.87
NCLN-203ENST00000587740 CELF2O95319 508 aaKnown RBP20.5■□□□□ 0.87
NCLN-203ENST00000587740 SLC10A5Q5PT55 438 aa20.5■□□□□ 0.87
NCLN-203ENST00000587740 RUNDC1Q96C34 613 aa20.5■□□□□ 0.87
NCLN-203ENST00000587740 NLRP3Q96P20 1036 aa20.5■□□□□ 0.87
NCLN-203ENST00000587740 RTFDC1Q9BY42 306 aaPredicted RBP20.5■□□□□ 0.87
NCLN-203ENST00000587740 GLIS2Q9BZE0 524 aaPredicted RBP20.5■□□□□ 0.87
NCLN-203ENST00000587740 ZNRF3Q9ULT6 936 aa20.5■□□□□ 0.87
NCLN-203ENST00000587740 ABCC4O15439 1325 aa20.5■□□□□ 0.87
NCLN-203ENST00000587740 GMPSP49915 693 aaPredicted RBP20.49■□□□□ 0.87
NCLN-203ENST00000587740 HIRAP54198 1017 aaPredicted RBP20.49■□□□□ 0.87
NCLN-203ENST00000587740 NFE2L2Q16236 605 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms