RNA–Protein interactions for RNA: ENST00000587652.5

GCOM1-214, Transcript of GRINL1A complex locus 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GCOM1, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-214ENST00000587652 CUL4AQ13619 759 aa16.79■□□□□ 0.28
GCOM1-214ENST00000587652 TTC5Q8N0Z6 440 aa16.79■□□□□ 0.28
GCOM1-214ENST00000587652 ECHDC1Q9NTX5 307 aa16.79■□□□□ 0.28
GCOM1-214ENST00000587652 ISY1Q9ULR0 285 aaKnown RBP16.79■□□□□ 0.28
GCOM1-214ENST00000587652 PCDH11XQ9BZA7 1347 aa16.79■□□□□ 0.28
GCOM1-214ENST00000587652 PCDH11YQ9BZA8 1340 aa16.79■□□□□ 0.28
GCOM1-214ENST00000587652 COPS6Q7L5N1 327 aa16.79■□□□□ 0.28
GCOM1-214ENST00000587652 CDCA7Q9BWT1 371 aaPredicted RBP16.79■□□□□ 0.28
GCOM1-214ENST00000587652 IL25Q9H293 177 aa16.79■□□□□ 0.28
GCOM1-214ENST00000587652 BICC1Q9H694 974 aaKnown RBP16.79■□□□□ 0.28
GCOM1-214ENST00000587652 MAP4K4O95819 1239 aaPredicted RBP16.78■□□□□ 0.28
GCOM1-214ENST00000587652 GCKRQ14397 625 aa16.78■□□□□ 0.28
GCOM1-214ENST00000587652 GPATCH3Q96I76 525 aa16.78■□□□□ 0.28
GCOM1-214ENST00000587652 GZF1Q9H116 711 aaPredicted RBP16.78■□□□□ 0.28
GCOM1-214ENST00000587652 PA2G4Q9UQ80 394 aaKnown RBP16.78■□□□□ 0.28
GCOM1-214ENST00000587652 LAMB4A4D0S4 1761 aa16.78■□□□□ 0.28
GCOM1-214ENST00000587652 RAD50Q92878 1312 aa16.78■□□□□ 0.28
GCOM1-214ENST00000587652 TMX3Q96JJ7 454 aa16.78■□□□□ 0.28
GCOM1-214ENST00000587652 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
GCOM1-214ENST00000587652 COL15A1P39059 1388 aa16.77■□□□□ 0.28
GCOM1-214ENST00000587652 MYL6BP14649 208 aa16.77■□□□□ 0.28
GCOM1-214ENST00000587652 CABP4P57796 275 aa16.77■□□□□ 0.28
GCOM1-214ENST00000587652 ANKRD13DQ6ZTN6 518 aa16.77■□□□□ 0.28
GCOM1-214ENST00000587652 ZGPATQ8N5A5 531 aaKnown RBP16.77■□□□□ 0.28
GCOM1-214ENST00000587652 LSG1Q9H089 658 aaKnown RBP16.77■□□□□ 0.28
GCOM1-214ENST00000587652 TOGARAM1Q9Y4F4 1720 aa16.77■□□□□ 0.27
GCOM1-214ENST00000587652 SASH1O94885 1247 aa16.76■□□□□ 0.27
GCOM1-214ENST00000587652 IFIT2P09913 472 aaKnown RBP16.76■□□□□ 0.27
GCOM1-214ENST00000587652 G3BP1Q13283 466 aaKnown RBP eCLIP16.76■□□□□ 0.27
GCOM1-214ENST00000587652 INTS4Q96HW7 963 aaKnown RBP16.76■□□□□ 0.27
GCOM1-214ENST00000587652 MYD88Q99836 296 aa16.76■□□□□ 0.27
GCOM1-214ENST00000587652 PTF1AQ7RTS3 328 aa16.75■□□□□ 0.27
GCOM1-214ENST00000587652 ACSBG1Q96GR2 724 aa16.75■□□□□ 0.27
GCOM1-214ENST00000587652 ERBB4Q15303 1308 aa16.75■□□□□ 0.27
GCOM1-214ENST00000587652 RUFY2Q8WXA3 655 aa16.75■□□□□ 0.27
GCOM1-214ENST00000587652 EVI5LQ96CN4 794 aa16.74■□□□□ 0.27
GCOM1-214ENST00000587652 ARFGEF2Q9Y6D5 1785 aa16.74■□□□□ 0.27
GCOM1-214ENST00000587652 XRCC6P12956 609 aaKnown RBP eCLIP16.74■□□□□ 0.27
GCOM1-214ENST00000587652 AACSQ86V21 672 aa16.74■□□□□ 0.27
GCOM1-214ENST00000587652 ZDHHC9Q9Y397 364 aa16.74■□□□□ 0.27
GCOM1-214ENST00000587652 MRE11P49959 708 aa16.73■□□□□ 0.27
GCOM1-214ENST00000587652 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
GCOM1-214ENST00000587652 ERVV-2B6SEH9 535 aa16.73■□□□□ 0.27
GCOM1-214ENST00000587652 KCNQ2O43526 872 aa16.73■□□□□ 0.27
GCOM1-214ENST00000587652 PKP1Q13835 747 aa16.73■□□□□ 0.27
GCOM1-214ENST00000587652 KLHL40Q2TBA0 621 aa16.73■□□□□ 0.27
GCOM1-214ENST00000587652 KIAA1211Q6ZU35 1233 aa16.73■□□□□ 0.27
GCOM1-214ENST00000587652 EAF2Q96CJ1 260 aaPredicted RBP16.73■□□□□ 0.27
GCOM1-214ENST00000587652 SNX14Q9Y5W7 946 aa16.73■□□□□ 0.27
GCOM1-214ENST00000587652 AFDNP55196 1824 aaKnown RBP16.72■□□□□ 0.27
GCOM1-214ENST00000587652 UBR2Q8IWV8 1755 aa16.72■□□□□ 0.27
GCOM1-214ENST00000587652 PLBD2Q8NHP8 589 aa16.72■□□□□ 0.27
GCOM1-214ENST00000587652 COPRSQ9NQ92 184 aa16.72■□□□□ 0.27
GCOM1-214ENST00000587652 DIAPH3Q9NSV4 1193 aa16.72■□□□□ 0.27
GCOM1-214ENST00000587652 DOT1LQ8TEK3 1739 aa16.72■□□□□ 0.27
GCOM1-214ENST00000587652 RABL6Q3YEC7 729 aaPredicted RBP16.71■□□□□ 0.27
GCOM1-214ENST00000587652 EPHA10Q5JZY3 1008 aa16.71■□□□□ 0.27
GCOM1-214ENST00000587652 CWC27Q6UX04 472 aaKnown RBP16.71■□□□□ 0.27
GCOM1-214ENST00000587652 KRT27Q7Z3Y8 459 aa16.71■□□□□ 0.27
GCOM1-214ENST00000587652 ITGB4P16144 1822 aa16.71■□□□□ 0.27
GCOM1-214ENST00000587652 HIP1O00291 1037 aa16.71■□□□□ 0.27
GCOM1-214ENST00000587652 KCNB2Q92953 911 aa16.71■□□□□ 0.27
GCOM1-214ENST00000587652 SYTL4Q96C24 671 aaPredicted RBP16.71■□□□□ 0.27
GCOM1-214ENST00000587652 PAPPAQ13219 1627 aa16.71■□□□□ 0.27
GCOM1-214ENST00000587652 RFX5P48382 616 aaPredicted RBP16.7■□□□□ 0.26
GCOM1-214ENST00000587652 PRIM1P49642 420 aaKnown RBP16.7■□□□□ 0.26
GCOM1-214ENST00000587652 LMBRD1Q9NUN5 540 aa16.7■□□□□ 0.26
GCOM1-214ENST00000587652 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.7■□□□□ 0.26
GCOM1-214ENST00000587652 MCTP1Q6DN14 999 aa16.7■□□□□ 0.26
GCOM1-214ENST00000587652 TTC14Q96N46 770 aa16.7■□□□□ 0.26
GCOM1-214ENST00000587652 UPF3BQ9BZI7 483 aaKnown RBP16.7■□□□□ 0.26
GCOM1-214ENST00000587652 SNRKQ9NRH2 765 aa16.7■□□□□ 0.26
GCOM1-214ENST00000587652 BRD1O95696 1058 aa16.69■□□□□ 0.26
GCOM1-214ENST00000587652 CASP7P55210 303 aa16.69■□□□□ 0.26
GCOM1-214ENST00000587652 CCDC8Q9H0W5 538 aaPredicted RBP16.69■□□□□ 0.26
GCOM1-214ENST00000587652 GRPEL1Q9HAV7 217 aa16.69■□□□□ 0.26
GCOM1-214ENST00000587652 KCPQ6ZWJ8 1503 aa16.68■□□□□ 0.26
GCOM1-214ENST00000587652 PIGBQ92521 554 aa16.68■□□□□ 0.26
GCOM1-214ENST00000587652 DDX49Q9Y6V7 483 aaKnown RBP16.68■□□□□ 0.26
GCOM1-214ENST00000587652 RASEFQ8IZ41 740 aa16.68■□□□□ 0.26
GCOM1-214ENST00000587652 NBPF26B4DH59 902 aa16.67■□□□□ 0.26
GCOM1-214ENST00000587652 PIP4K2AP48426 406 aaPredicted RBP16.67■□□□□ 0.26
GCOM1-214ENST00000587652 PTPN12Q05209 780 aaKnown RBP16.67■□□□□ 0.26
GCOM1-214ENST00000587652 NBPF14Q5TI25 921 aa16.67■□□□□ 0.26
GCOM1-214ENST00000587652 NBPF10Q6P3W6 841 aaKnown RBP16.67■□□□□ 0.26
GCOM1-214ENST00000587652 NBPF15Q8N660 670 aa16.67■□□□□ 0.26
GCOM1-214ENST00000587652 TM6SF1Q9BZW5 370 aa16.67■□□□□ 0.26
GCOM1-214ENST00000587652 SIL1Q9H173 461 aa16.67■□□□□ 0.26
GCOM1-214ENST00000587652 SBF2Q86WG5 1849 aa16.67■□□□□ 0.26
GCOM1-214ENST00000587652 NUP188Q5SRE5 1749 aa16.67■□□□□ 0.26
GCOM1-214ENST00000587652 H7C1W4 665 aa16.66■□□□□ 0.26
GCOM1-214ENST00000587652 PTH1RQ03431 593 aa16.66■□□□□ 0.26
GCOM1-214ENST00000587652 KLHDC4Q8TBB5 520 aa16.66■□□□□ 0.26
GCOM1-214ENST00000587652 TLR7Q9NYK1 1049 aaKnown RBP16.66■□□□□ 0.26
GCOM1-214ENST00000587652 A0A087WZG4 1122 aa16.65■□□□□ 0.26
GCOM1-214ENST00000587652 UBE3BQ7Z3V4 1068 aa16.65■□□□□ 0.26
GCOM1-214ENST00000587652 GAS2L3Q86XJ1 694 aa16.65■□□□□ 0.26
GCOM1-214ENST00000587652 NECTIN1Q15223 517 aa16.65■□□□□ 0.26
GCOM1-214ENST00000587652 ASAP1Q9ULH1 1129 aa16.65■□□□□ 0.26
GCOM1-214ENST00000587652 CCDC171Q6TFL3 1326 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms