RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 NUTM1Q86Y26 1132 aa15.06■□□□□ 0
PRKCSH-206ENST00000587509 SH3TC1Q8TE82 1336 aa15.06■□□□□ 0
PRKCSH-206ENST00000587509 LMNB1P20700 586 aa15.05■□□□□ -0
PRKCSH-206ENST00000587509 CRY2Q49AN0 593 aa15.05■□□□□ -0
PRKCSH-206ENST00000587509 ERFEQ4G0M1 354 aa15.05■□□□□ -0
PRKCSH-206ENST00000587509 CCDC93Q567U6 631 aa15.05■□□□□ -0
PRKCSH-206ENST00000587509 SUSD4Q5VX71 490 aa15.05■□□□□ -0
PRKCSH-206ENST00000587509 C9orf131Q5VYM1 1079 aa15.05■□□□□ -0
PRKCSH-206ENST00000587509 C8orf58Q8NAV2 365 aa15.05■□□□□ -0
PRKCSH-206ENST00000587509 NLRP3Q96P20 1036 aa15.05■□□□□ -0
PRKCSH-206ENST00000587509 TAOK3Q9H2K8 898 aa15.05■□□□□ -0
PRKCSH-206ENST00000587509 RNF181Q9P0P0 153 aa15.05■□□□□ -0
PRKCSH-206ENST00000587509 TRMT112Q9UI30 125 aaKnown RBP15.05■□□□□ -0
PRKCSH-206ENST00000587509 TNRC6CQ9HCJ0 1690 aaKnown RBP15.04■□□□□ -0
PRKCSH-206ENST00000587509 LTBP3Q9NS15 1303 aa15.04■□□□□ -0
PRKCSH-206ENST00000587509 GRIPAP1Q4V328 841 aa15.04■□□□□ -0
PRKCSH-206ENST00000587509 NLRP10Q86W26 655 aa15.04■□□□□ -0
PRKCSH-206ENST00000587509 RBM17Q96I25 401 aaKnown RBP15.04■□□□□ -0
PRKCSH-206ENST00000587509 KDM2BQ8NHM5 1336 aa15.03■□□□□ -0
PRKCSH-206ENST00000587509 SENP3-EIF4A1A0A087X0R7 540 aa15.03■□□□□ -0
PRKCSH-206ENST00000587509 C21orf2O43822 256 aa15.03■□□□□ -0
PRKCSH-206ENST00000587509 NEXNQ0ZGT2 675 aa15.03■□□□□ -0
PRKCSH-206ENST00000587509 CC2D2BQ6DHV5 1058 aa15.03■□□□□ -0
PRKCSH-206ENST00000587509 RTKN2Q8IZC4 609 aa15.02■□□□□ -0
PRKCSH-206ENST00000587509 CACNA1SQ13698 1873 aa15.01□□□□□ -0.01
PRKCSH-206ENST00000587509 RASSF7Q02833 373 aa15.01□□□□□ -0.01
PRKCSH-206ENST00000587509 TRIM28Q13263 835 aaKnown RBP15.01□□□□□ -0.01
PRKCSH-206ENST00000587509 TSPYL6Q8N831 410 aa15.01□□□□□ -0.01
PRKCSH-206ENST00000587509 ZNF219Q9P2Y4 722 aaPredicted RBP15.01□□□□□ -0.01
PRKCSH-206ENST00000587509 E9PSI1 815 aa15□□□□□ -0.01
PRKCSH-206ENST00000587509 HOXA10P31260 410 aaPredicted RBP15□□□□□ -0.01
PRKCSH-206ENST00000587509 SLC10A5Q5PT55 438 aa15□□□□□ -0.01
PRKCSH-206ENST00000587509 DIEXFQ68CQ4 756 aaKnown RBP15□□□□□ -0.01
PRKCSH-206ENST00000587509 CCDC191Q8NCU4 936 aa15□□□□□ -0.01
PRKCSH-206ENST00000587509 ZNF526Q8TF50 670 aaPredicted RBP15□□□□□ -0.01
PRKCSH-206ENST00000587509 CRAMP1Q96RY5 1269 aa15□□□□□ -0.01
PRKCSH-206ENST00000587509 ISCA1Q9BUE6 129 aa15□□□□□ -0.01
PRKCSH-206ENST00000587509 PHAXQ9H814 394 aaKnown RBP15□□□□□ -0.01
PRKCSH-206ENST00000587509 NFKBIEO00221 500 aa14.99□□□□□ -0.01
PRKCSH-206ENST00000587509 PPEF1O14829 653 aaPredicted RBP14.99□□□□□ -0.01
PRKCSH-206ENST00000587509 KSR2Q6VAB6 950 aa14.99□□□□□ -0.01
PRKCSH-206ENST00000587509 DDX46Q7L014 1031 aaKnown RBP14.99□□□□□ -0.01
PRKCSH-206ENST00000587509 TMC4Q7Z404 712 aa14.99□□□□□ -0.01
PRKCSH-206ENST00000587509 MYD88Q99836 296 aa14.99□□□□□ -0.01
PRKCSH-206ENST00000587509 CWC25Q9NXE8 425 aaPredicted RBP14.99□□□□□ -0.01
PRKCSH-206ENST00000587509 TIAM2Q8IVF5 1701 aa14.99□□□□□ -0.01
PRKCSH-206ENST00000587509 SLX4Q8IY92 1834 aa14.99□□□□□ -0.01
PRKCSH-206ENST00000587509 ZNF521Q96K83 1311 aa14.98□□□□□ -0.01
PRKCSH-206ENST00000587509 FER1L6Q2WGJ9 1857 aa14.98□□□□□ -0.01
PRKCSH-206ENST00000587509 ATP5J2-PTCD1G3V325 749 aa14.98□□□□□ -0.01
PRKCSH-206ENST00000587509 SLC4A2P04920 1241 aa14.98□□□□□ -0.01
PRKCSH-206ENST00000587509 FKBP4Q02790 459 aaKnown RBP eCLIP14.98□□□□□ -0.01
PRKCSH-206ENST00000587509 EXOSC9Q06265 439 aaKnown RBP14.98□□□□□ -0.01
PRKCSH-206ENST00000587509 FKBP5Q13451 457 aaPredicted RBP14.98□□□□□ -0.01
PRKCSH-206ENST00000587509 ZBTB38Q8NAP3 1195 aaPredicted RBP14.98□□□□□ -0.01
PRKCSH-206ENST00000587509 METTL22Q9BUU2 404 aaPredicted RBP14.98□□□□□ -0.01
PRKCSH-206ENST00000587509 MAP3K2Q9Y2U5 619 aa14.98□□□□□ -0.01
PRKCSH-206ENST00000587509 CACNA1FO60840 1977 aa14.98□□□□□ -0.01
PRKCSH-206ENST00000587509 LAMB2P55268 1798 aa14.98□□□□□ -0.01
PRKCSH-206ENST00000587509 FLIIQ13045 1269 aa14.97□□□□□ -0.01
PRKCSH-206ENST00000587509 DPY19L2Q6NUT2 758 aa14.97□□□□□ -0.01
PRKCSH-206ENST00000587509 C16orf71Q8IYS4 520 aaPredicted RBP14.97□□□□□ -0.01
PRKCSH-206ENST00000587509 PI4KAP2A4QPH2 592 aa14.96□□□□□ -0.01
PRKCSH-206ENST00000587509 SBF1O95248 1867 aa14.96□□□□□ -0.01
PRKCSH-206ENST00000587509 HCLS1P14317 486 aaPredicted RBP14.96□□□□□ -0.01
PRKCSH-206ENST00000587509 PI4KAP1Q8N8J0 262 aa14.96□□□□□ -0.01
PRKCSH-206ENST00000587509 ABCC4O15439 1325 aa14.95□□□□□ -0.02
PRKCSH-206ENST00000587509 IRS4O14654 1257 aaPredicted RBP14.95□□□□□ -0.02
PRKCSH-206ENST00000587509 VAMP4O75379 141 aa14.95□□□□□ -0.02
PRKCSH-206ENST00000587509 BBOX1O75936 387 aa14.95□□□□□ -0.02
PRKCSH-206ENST00000587509 PCCAP05165 728 aaPredicted RBP14.95□□□□□ -0.02
PRKCSH-206ENST00000587509 GRAPQ13588 217 aa14.95□□□□□ -0.02
PRKCSH-206ENST00000587509 GRAPLQ8TC17 118 aaPredicted RBP14.95□□□□□ -0.02
PRKCSH-206ENST00000587509 C7orf43Q8WVR3 580 aa14.95□□□□□ -0.02
PRKCSH-206ENST00000587509 ZNF428Q96B54 188 aa14.95□□□□□ -0.02
PRKCSH-206ENST00000587509 FAM89AQ96GI7 184 aa14.95□□□□□ -0.02
PRKCSH-206ENST00000587509 PSMD1Q99460 953 aa14.95□□□□□ -0.02
PRKCSH-206ENST00000587509 CCDC152Q4G0S7 254 aa14.94□□□□□ -0.02
PRKCSH-206ENST00000587509 SUPT20HQ8NEM7 779 aa14.94□□□□□ -0.02
PRKCSH-206ENST00000587509 DDX60Q8IY21 1712 aaKnown RBP14.93□□□□□ -0.02
PRKCSH-206ENST00000587509 TCERG1O14776 1098 aaKnown RBP14.93□□□□□ -0.02
PRKCSH-206ENST00000587509 C1QTNF8P60827 252 aa14.93□□□□□ -0.02
PRKCSH-206ENST00000587509 DNAAF4Q8WXU2 420 aa14.93□□□□□ -0.02
PRKCSH-206ENST00000587509 JDP2Q8WYK2 163 aa14.93□□□□□ -0.02
PRKCSH-206ENST00000587509 ATP6V0A2Q9Y487 856 aa14.93□□□□□ -0.02
PRKCSH-206ENST00000587509 CDHR2Q9BYE9 1310 aa14.92□□□□□ -0.02
PRKCSH-206ENST00000587509 DICER1Q9UPY3 1922 aaKnown RBP14.92□□□□□ -0.02
PRKCSH-206ENST00000587509 GLTPD2A6NH11 291 aa14.92□□□□□ -0.02
PRKCSH-206ENST00000587509 CT47B1P0C2W7 299 aaPredicted RBP14.92□□□□□ -0.02
PRKCSH-206ENST00000587509 IARSP41252 1262 aaKnown RBP14.92□□□□□ -0.02
PRKCSH-206ENST00000587509 SF3B3Q15393 1217 aaKnown RBP14.92□□□□□ -0.02
PRKCSH-206ENST00000587509 RTL5Q5HYW3 569 aaPredicted RBP14.92□□□□□ -0.02
PRKCSH-206ENST00000587509 C3orf67Q6ZVT6 689 aa14.92□□□□□ -0.02
PRKCSH-206ENST00000587509 SPINK5Q9NQ38 1064 aaPredicted RBP14.92□□□□□ -0.02
PRKCSH-206ENST00000587509 PDE8AO60658 829 aa14.91□□□□□ -0.02
PRKCSH-206ENST00000587509 LINS1Q8NG48 757 aa14.91□□□□□ -0.02
PRKCSH-206ENST00000587509 VPS33BQ9H267 617 aa14.91□□□□□ -0.02
PRKCSH-206ENST00000587509 ZNF277Q9NRM2 450 aaPredicted RBP14.91□□□□□ -0.02
PRKCSH-206ENST00000587509 NEURL1BA8MQ27 555 aa14.9□□□□□ -0.02
PRKCSH-206ENST00000587509 DPP8Q6V1X1 898 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms