RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 SPATA32Q96LK8 384 aa19.5■□□□□ 0.71
RANBP3-209ENST00000587411 CTNNA3Q9UI47 895 aa19.5■□□□□ 0.71
RANBP3-209ENST00000587411 GABPB1Q06547 395 aaPredicted RBP19.5■□□□□ 0.71
RANBP3-209ENST00000587411 TAF3Q5VWG9 929 aa19.5■□□□□ 0.71
RANBP3-209ENST00000587411 CREB3L3Q68CJ9 461 aa19.5■□□□□ 0.71
RANBP3-209ENST00000587411 NBPF7P0C2Y1 421 aaPredicted RBP19.49■□□□□ 0.71
RANBP3-209ENST00000587411 LRMPQ12912 555 aa19.49■□□□□ 0.71
RANBP3-209ENST00000587411 MTX1Q13505 466 aa19.49■□□□□ 0.71
RANBP3-209ENST00000587411 ALDH8A1Q9H2A2 487 aaPredicted RBP19.49■□□□□ 0.71
RANBP3-209ENST00000587411 RBM8AQ9Y5S9 174 aaKnown RBP19.49■□□□□ 0.71
RANBP3-209ENST00000587411 BEND3Q5T5X7 828 aa19.49■□□□□ 0.71
RANBP3-209ENST00000587411 ERC1Q8IUD2 1116 aa19.49■□□□□ 0.71
RANBP3-209ENST00000587411 CKAP2LQ8IYA6 745 aa19.49■□□□□ 0.71
RANBP3-209ENST00000587411 CHMP3Q9Y3E7 222 aa19.49■□□□□ 0.71
RANBP3-209ENST00000587411 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.49■□□□□ 0.71
RANBP3-209ENST00000587411 DNAAF4Q8WXU2 420 aa19.48■□□□□ 0.71
RANBP3-209ENST00000587411 HOXB7P09629 217 aa19.48■□□□□ 0.71
RANBP3-209ENST00000587411 FERMT3Q86UX7 667 aa19.48■□□□□ 0.71
RANBP3-209ENST00000587411 MAP4K1Q92918 833 aa19.48■□□□□ 0.71
RANBP3-209ENST00000587411 NEMFO60524 1076 aa19.48■□□□□ 0.71
RANBP3-209ENST00000587411 KCNJ4P48050 445 aa19.48■□□□□ 0.71
RANBP3-209ENST00000587411 LEO1Q8WVC0 666 aaPredicted RBP19.48■□□□□ 0.71
RANBP3-209ENST00000587411 SNRKQ9NRH2 765 aa19.48■□□□□ 0.71
RANBP3-209ENST00000587411 CLIP2Q9UDT6 1046 aa19.48■□□□□ 0.71
RANBP3-209ENST00000587411 ZNF165P49910 485 aa19.47■□□□□ 0.71
RANBP3-209ENST00000587411 RNF20Q5VTR2 975 aa19.47■□□□□ 0.71
RANBP3-209ENST00000587411 NRBP1Q9UHY1 535 aa19.47■□□□□ 0.71
RANBP3-209ENST00000587411 DDX41Q9UJV9 622 aaKnown RBP19.47■□□□□ 0.71
RANBP3-209ENST00000587411 IFIT2P09913 472 aaKnown RBP19.47■□□□□ 0.71
RANBP3-209ENST00000587411 TPD52L1Q16890 204 aaPredicted RBP19.47■□□□□ 0.71
RANBP3-209ENST00000587411 GIGYF1O75420 1035 aaPredicted RBP19.46■□□□□ 0.71
RANBP3-209ENST00000587411 BLOC1S2Q6QNY1 142 aa19.46■□□□□ 0.71
RANBP3-209ENST00000587411 SLC27A2O14975 620 aa19.45■□□□□ 0.7
RANBP3-209ENST00000587411 SARM1Q6SZW1 724 aa19.45■□□□□ 0.7
RANBP3-209ENST00000587411 HDAC5Q9UQL6 1122 aa19.45■□□□□ 0.7
RANBP3-209ENST00000587411 FAM173BQ6P4H8 233 aa19.45■□□□□ 0.7
RANBP3-209ENST00000587411 CACTINQ8WUQ7 758 aaKnown RBP19.45■□□□□ 0.7
RANBP3-209ENST00000587411 MORC2Q9Y6X9 1032 aaPredicted RBP19.45■□□□□ 0.7
RANBP3-209ENST00000587411 NUTM2FA1L443 756 aa19.44■□□□□ 0.7
RANBP3-209ENST00000587411 CEP135Q66GS9 1140 aa19.44■□□□□ 0.7
RANBP3-209ENST00000587411 DTNBO60941 627 aa19.44■□□□□ 0.7
RANBP3-209ENST00000587411 RPS6KB1P23443 525 aa19.44■□□□□ 0.7
RANBP3-209ENST00000587411 BICD2Q8TD16 824 aa19.44■□□□□ 0.7
RANBP3-209ENST00000587411 PI4KAP2A4QPH2 592 aa19.43■□□□□ 0.7
RANBP3-209ENST00000587411 PI4KAP1Q8N8J0 262 aa19.43■□□□□ 0.7
RANBP3-209ENST00000587411 DNAJC25Q9H1X3 360 aa19.43■□□□□ 0.7
RANBP3-209ENST00000587411 ADAMTS13Q76LX8 1427 aa19.43■□□□□ 0.7
RANBP3-209ENST00000587411 RBM6P78332 1123 aaKnown RBP19.43■□□□□ 0.7
RANBP3-209ENST00000587411 LARP1Q6PKG0 1096 aaKnown RBP19.43■□□□□ 0.7
RANBP3-209ENST00000587411 ZNF771Q7L3S4 317 aaPredicted RBP19.43■□□□□ 0.7
RANBP3-209ENST00000587411 MRFAP1L1Q96HT8 127 aa19.43■□□□□ 0.7
RANBP3-209ENST00000587411 TFIP11Q9UBB9 837 aaKnown RBP19.43■□□□□ 0.7
RANBP3-209ENST00000587411 NWD1Q149M9 1564 aa19.43■□□□□ 0.7
RANBP3-209ENST00000587411 NR1I2O75469 434 aa19.42■□□□□ 0.7
RANBP3-209ENST00000587411 DDX54Q8TDD1 881 aaKnown RBP19.42■□□□□ 0.7
RANBP3-209ENST00000587411 HMG20BQ9P0W2 317 aa19.42■□□□□ 0.7
RANBP3-209ENST00000587411 TMEM2Q9UHN6 1383 aa19.42■□□□□ 0.7
RANBP3-209ENST00000587411 GOLGA6L19H0YKK7 550 aa19.42■□□□□ 0.7
RANBP3-209ENST00000587411 NMIQ13287 307 aaPredicted RBP19.42■□□□□ 0.7
RANBP3-209ENST00000587411 KIF18AQ8NI77 898 aa19.41■□□□□ 0.7
RANBP3-209ENST00000587411 CEMIPQ8WUJ3 1361 aa19.41■□□□□ 0.7
RANBP3-209ENST00000587411 EIF2S2P20042 333 aaKnown RBP19.41■□□□□ 0.7
RANBP3-209ENST00000587411 EIF4A1P60842 406 aaKnown RBP19.41■□□□□ 0.7
RANBP3-209ENST00000587411 LRRC8AQ8IWT6 810 aa19.41■□□□□ 0.7
RANBP3-209ENST00000587411 ZNF397Q8NF99 534 aaPredicted RBP19.41■□□□□ 0.7
RANBP3-209ENST00000587411 PGBD1Q96JS3 809 aa19.41■□□□□ 0.7
RANBP3-209ENST00000587411 CHPF2Q9P2E5 772 aa19.41■□□□□ 0.7
RANBP3-209ENST00000587411 CTAGE5O15320 804 aa19.4■□□□□ 0.7
RANBP3-209ENST00000587411 ALDH1L1O75891 902 aa19.4■□□□□ 0.7
RANBP3-209ENST00000587411 HOXC9P31274 260 aa19.4■□□□□ 0.7
RANBP3-209ENST00000587411 CCDC144BQ3MJ40 725 aa19.4■□□□□ 0.7
RANBP3-209ENST00000587411 TSGA10IPQ3SY00 556 aa19.4■□□□□ 0.7
RANBP3-209ENST00000587411 AACSQ86V21 672 aa19.4■□□□□ 0.7
RANBP3-209ENST00000587411 CCDC144CPQ8IYA2 1237 aa19.4■□□□□ 0.7
RANBP3-209ENST00000587411 FAM227BQ96M60 508 aa19.4■□□□□ 0.7
RANBP3-209ENST00000587411 TOB2Q14106 344 aaPredicted RBP19.4■□□□□ 0.7
RANBP3-209ENST00000587411 NPHP4O75161 1426 aaPredicted RBP19.4■□□□□ 0.7
RANBP3-209ENST00000587411 ZSCAN16Q9H4T2 348 aaPredicted RBP19.39■□□□□ 0.7
RANBP3-209ENST00000587411 CFAP45Q9UL16 551 aa19.39■□□□□ 0.7
RANBP3-209ENST00000587411 IQCB1Q15051 598 aa19.39■□□□□ 0.69
RANBP3-209ENST00000587411 ADCY9O60503 1353 aa19.39■□□□□ 0.69
RANBP3-209ENST00000587411 JCADQ9P266 1359 aa19.38■□□□□ 0.69
RANBP3-209ENST00000587411 RESTQ13127 1097 aa19.38■□□□□ 0.69
RANBP3-209ENST00000587411 PTPN14Q15678 1187 aa19.38■□□□□ 0.69
RANBP3-209ENST00000587411 NYAP1Q6ZVC0 841 aa19.38■□□□□ 0.69
RANBP3-209ENST00000587411 KRT222Q8N1A0 295 aa19.38■□□□□ 0.69
RANBP3-209ENST00000587411 NGDNQ8NEJ9 315 aaKnown RBP19.38■□□□□ 0.69
RANBP3-209ENST00000587411 MED1Q15648 1581 aaPredicted RBP19.38■□□□□ 0.69
RANBP3-209ENST00000587411 MED23Q9ULK4 1368 aa19.38■□□□□ 0.69
RANBP3-209ENST00000587411 KRT32Q14532 448 aa19.38■□□□□ 0.69
RANBP3-209ENST00000587411 STX1AQ16623 288 aa19.38■□□□□ 0.69
RANBP3-209ENST00000587411 KCND1Q9NSA2 647 aa19.38■□□□□ 0.69
RANBP3-209ENST00000587411 DIP2BQ9P265 1576 aa19.38■□□□□ 0.69
RANBP3-209ENST00000587411 PIK3C2AO00443 1686 aa19.37■□□□□ 0.69
RANBP3-209ENST00000587411 SLFNL1Q499Z3 407 aa19.37■□□□□ 0.69
RANBP3-209ENST00000587411 ZNF592Q92610 1267 aa19.37■□□□□ 0.69
RANBP3-209ENST00000587411 ERO1AQ96HE7 468 aa19.37■□□□□ 0.69
RANBP3-209ENST00000587411 C9orf78Q9NZ63 289 aaPredicted RBP19.37■□□□□ 0.69
RANBP3-209ENST00000587411 KIF2AO00139 706 aaPredicted RBP19.37■□□□□ 0.69
RANBP3-209ENST00000587411 NAA30Q147X3 362 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms