RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 CRY2Q49AN0 593 aa13.86□□□□□ -0.19
ZNF540-205ENST00000587220 RBM17Q96I25 401 aaKnown RBP13.86□□□□□ -0.19
ZNF540-205ENST00000587220 CFAP44Q96MT7 982 aa13.86□□□□□ -0.19
ZNF540-205ENST00000587220 TMX4Q9H1E5 349 aaPredicted RBP13.86□□□□□ -0.19
ZNF540-205ENST00000587220 CHPF2Q9P2E5 772 aa13.86□□□□□ -0.19
ZNF540-205ENST00000587220 RIC1Q4ADV7 1423 aa13.86□□□□□ -0.19
ZNF540-205ENST00000587220 ANKRD36CQ5JPF3 1778 aa13.86□□□□□ -0.19
ZNF540-205ENST00000587220 WDR90Q96KV7 1748 aa13.85□□□□□ -0.19
ZNF540-205ENST00000587220 APAF1O14727 1248 aa13.85□□□□□ -0.19
ZNF540-205ENST00000587220 HOXB7P09629 217 aa13.85□□□□□ -0.19
ZNF540-205ENST00000587220 OLFM4Q6UX06 510 aa13.85□□□□□ -0.19
ZNF540-205ENST00000587220 LRP10Q7Z4F1 713 aa13.85□□□□□ -0.19
ZNF540-205ENST00000587220 NLRP3Q96P20 1036 aa13.85□□□□□ -0.19
ZNF540-205ENST00000587220 ZNF277Q9NRM2 450 aaPredicted RBP13.85□□□□□ -0.19
ZNF540-205ENST00000587220 CC2D2BQ6DHV5 1058 aa13.84□□□□□ -0.19
ZNF540-205ENST00000587220 DBF4Q9UBU7 674 aaPredicted RBP13.84□□□□□ -0.19
ZNF540-205ENST00000587220 RNF123Q5XPI4 1314 aa13.84□□□□□ -0.19
ZNF540-205ENST00000587220 IQCA1LA6NCM1 817 aa13.83□□□□□ -0.2
ZNF540-205ENST00000587220 TCERG1O14776 1098 aaKnown RBP13.83□□□□□ -0.2
ZNF540-205ENST00000587220 PPEF1O14829 653 aaPredicted RBP13.83□□□□□ -0.2
ZNF540-205ENST00000587220 DDNO94850 711 aaPredicted RBP13.83□□□□□ -0.2
ZNF540-205ENST00000587220 HOXA10P31260 410 aaPredicted RBP13.83□□□□□ -0.2
ZNF540-205ENST00000587220 IARSP41252 1262 aaKnown RBP13.83□□□□□ -0.2
ZNF540-205ENST00000587220 GNAI1P63096 354 aa13.83□□□□□ -0.2
ZNF540-205ENST00000587220 SYNE4Q8N205 404 aa13.83□□□□□ -0.2
ZNF540-205ENST00000587220 MBIPQ9NS73 344 aa13.83□□□□□ -0.2
ZNF540-205ENST00000587220 TRMT112Q9UI30 125 aaKnown RBP13.83□□□□□ -0.2
ZNF540-205ENST00000587220 TCIRG1Q13488 830 aa13.82□□□□□ -0.2
ZNF540-205ENST00000587220 GRIPAP1Q4V328 841 aa13.82□□□□□ -0.2
ZNF540-205ENST00000587220 DUSP27Q5VZP5 1158 aa13.82□□□□□ -0.2
ZNF540-205ENST00000587220 JDP2Q8WYK2 163 aa13.82□□□□□ -0.2
ZNF540-205ENST00000587220 CRAMP1Q96RY5 1269 aa13.82□□□□□ -0.2
ZNF540-205ENST00000587220 IFT57Q9NWB7 429 aa13.82□□□□□ -0.2
ZNF540-205ENST00000587220 HYPKQ9NX55 129 aa13.82□□□□□ -0.2
ZNF540-205ENST00000587220 POTECB2RU33 542 aa13.81□□□□□ -0.2
ZNF540-205ENST00000587220 ANKRD13DQ6ZTN6 518 aa13.81□□□□□ -0.2
ZNF540-205ENST00000587220 C3orf67Q6ZVT6 689 aa13.81□□□□□ -0.2
ZNF540-205ENST00000587220 NLRP10Q86W26 655 aa13.81□□□□□ -0.2
ZNF540-205ENST00000587220 PLBD2Q8NHP8 589 aa13.81□□□□□ -0.2
ZNF540-205ENST00000587220 PSMD1Q99460 953 aa13.81□□□□□ -0.2
ZNF540-205ENST00000587220 SH3TC1Q8TE82 1336 aa13.81□□□□□ -0.2
ZNF540-205ENST00000587220 HTRA3P83110 453 aa13.8□□□□□ -0.2
ZNF540-205ENST00000587220 SLC10A5Q5PT55 438 aa13.8□□□□□ -0.2
ZNF540-205ENST00000587220 SCN4AP35499 1836 aa13.79□□□□□ -0.2
ZNF540-205ENST00000587220 ELL2O00472 640 aaPredicted RBP13.79□□□□□ -0.2
ZNF540-205ENST00000587220 ANP32CO43423 234 aa13.79□□□□□ -0.2
ZNF540-205ENST00000587220 ZNF853P0CG23 659 aa13.79□□□□□ -0.2
ZNF540-205ENST00000587220 HCLS1P14317 486 aaPredicted RBP13.79□□□□□ -0.2
ZNF540-205ENST00000587220 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
ZNF540-205ENST00000587220 LARGE2Q8N3Y3 721 aa13.79□□□□□ -0.2
ZNF540-205ENST00000587220 ZNF428Q96B54 188 aa13.79□□□□□ -0.2
ZNF540-205ENST00000587220 CHMP4AQ9BY43 222 aa13.79□□□□□ -0.2
ZNF540-205ENST00000587220 ZNF541Q9H0D2 1346 aa13.79□□□□□ -0.2
ZNF540-205ENST00000587220 LAMB2P55268 1798 aa13.78□□□□□ -0.2
ZNF540-205ENST00000587220 EIF6P56537 245 aaKnown RBP13.78□□□□□ -0.2
ZNF540-205ENST00000587220 CHADLQ6NUI6 762 aa13.78□□□□□ -0.2
ZNF540-205ENST00000587220 DDX46Q7L014 1031 aaKnown RBP13.78□□□□□ -0.2
ZNF540-205ENST00000587220 RIC3Q7Z5B4 369 aa13.78□□□□□ -0.2
ZNF540-205ENST00000587220 DNAJC5GQ8N7S2 189 aa13.78□□□□□ -0.2
ZNF540-205ENST00000587220 L3MBTL3Q96JM7 780 aaPredicted RBP13.78□□□□□ -0.2
ZNF540-205ENST00000587220 ATP6V0A2Q9Y487 856 aa13.78□□□□□ -0.2
ZNF540-205ENST00000587220 ABCC4O15439 1325 aa13.78□□□□□ -0.2
ZNF540-205ENST00000587220 ZNF316A6NFI3 1004 aaPredicted RBP13.77□□□□□ -0.21
ZNF540-205ENST00000587220 ATP5J2-PTCD1G3V325 749 aa13.77□□□□□ -0.21
ZNF540-205ENST00000587220 FZD9O00144 591 aa13.77□□□□□ -0.21
ZNF540-205ENST00000587220 BBOX1O75936 387 aa13.77□□□□□ -0.21
ZNF540-205ENST00000587220 EAPPQ56P03 285 aaPredicted RBP13.77□□□□□ -0.21
ZNF540-205ENST00000587220 GPC2Q8N158 579 aa13.77□□□□□ -0.21
ZNF540-205ENST00000587220 SNED1Q8TER0 1413 aa13.77□□□□□ -0.21
ZNF540-205ENST00000587220 KLRG1Q96E93 195 aa13.77□□□□□ -0.21
ZNF540-205ENST00000587220 MRS2Q9HD23 443 aa13.77□□□□□ -0.21
ZNF540-205ENST00000587220 HACL1Q9UJ83 578 aa13.77□□□□□ -0.21
ZNF540-205ENST00000587220 GJA3Q9Y6H8 435 aa13.77□□□□□ -0.21
ZNF540-205ENST00000587220 PPIP5K2O43314 1243 aa13.76□□□□□ -0.21
ZNF540-205ENST00000587220 CCDC184Q52MB2 194 aa13.76□□□□□ -0.21
ZNF540-205ENST00000587220 LDHDQ86WU2 507 aa13.76□□□□□ -0.21
ZNF540-205ENST00000587220 NIM1KQ8IY84 436 aa13.76□□□□□ -0.21
ZNF540-205ENST00000587220 SUPT20HQ8NEM7 779 aa13.76□□□□□ -0.21
ZNF540-205ENST00000587220 TAF1DQ9H5J8 278 aaPredicted RBP13.76□□□□□ -0.21
ZNF540-205ENST00000587220 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
ZNF540-205ENST00000587220 POTEIP0CG38 1075 aa13.75□□□□□ -0.21
ZNF540-205ENST00000587220 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
ZNF540-205ENST00000587220 LMOD1P29536 600 aaPredicted RBP13.75□□□□□ -0.21
ZNF540-205ENST00000587220 EPHX2P34913 555 aa13.75□□□□□ -0.21
ZNF540-205ENST00000587220 RTL5Q5HYW3 569 aaPredicted RBP13.75□□□□□ -0.21
ZNF540-205ENST00000587220 CCDC30Q5VVM6 783 aa13.75□□□□□ -0.21
ZNF540-205ENST00000587220 DPP8Q6V1X1 898 aaPredicted RBP13.75□□□□□ -0.21
ZNF540-205ENST00000587220 PNMA8AQ86V59 439 aaPredicted RBP13.75□□□□□ -0.21
ZNF540-205ENST00000587220 C8orf58Q8NAV2 365 aa13.75□□□□□ -0.21
ZNF540-205ENST00000587220 FAM89AQ96GI7 184 aa13.75□□□□□ -0.21
ZNF540-205ENST00000587220 ISCA1Q9BUE6 129 aa13.75□□□□□ -0.21
ZNF540-205ENST00000587220 DDX60Q8IY21 1712 aaKnown RBP13.74□□□□□ -0.21
ZNF540-205ENST00000587220 DDX58O95786 925 aaKnown RBP13.74□□□□□ -0.21
ZNF540-205ENST00000587220 GRAPQ13588 217 aa13.74□□□□□ -0.21
ZNF540-205ENST00000587220 AOC3Q16853 763 aa13.74□□□□□ -0.21
ZNF540-205ENST00000587220 SLC51AQ86UW1 340 aa13.74□□□□□ -0.21
ZNF540-205ENST00000587220 SP8Q8IXZ3 490 aa13.74□□□□□ -0.21
ZNF540-205ENST00000587220 MPNDQ8N594 471 aa13.74□□□□□ -0.21
ZNF540-205ENST00000587220 GRAPLQ8TC17 118 aaPredicted RBP13.74□□□□□ -0.21
ZNF540-205ENST00000587220 TSR2Q969E8 191 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms