RNA–Protein interactions for RNA: ENST00000587087.5

CNN1-206, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-206ENST00000587087 CRY2Q49AN0 593 aa17.6■□□□□ 0.41
CNN1-206ENST00000587087 CCDC93Q567U6 631 aa17.59■□□□□ 0.41
CNN1-206ENST00000587087 C7orf43Q8WVR3 580 aa17.59■□□□□ 0.41
CNN1-206ENST00000587087 RPGRQ92834 1020 aaKnown RBP17.59■□□□□ 0.41
CNN1-206ENST00000587087 RNF123Q5XPI4 1314 aa17.58■□□□□ 0.4
CNN1-206ENST00000587087 TOMM70O94826 608 aa17.58■□□□□ 0.4
CNN1-206ENST00000587087 UTP14AQ9BVJ6 771 aaKnown RBP17.58■□□□□ 0.4
CNN1-206ENST00000587087 HYPKQ9NX55 129 aa17.58■□□□□ 0.4
CNN1-206ENST00000587087 TCIRG1Q13488 830 aa17.57■□□□□ 0.4
CNN1-206ENST00000587087 CCDC27Q2M243 656 aa17.57■□□□□ 0.4
CNN1-206ENST00000587087 C16orf71Q8IYS4 520 aaPredicted RBP17.57■□□□□ 0.4
CNN1-206ENST00000587087 GLTPD2A6NH11 291 aa17.56■□□□□ 0.4
CNN1-206ENST00000587087 ELL2O00472 640 aaPredicted RBP17.56■□□□□ 0.4
CNN1-206ENST00000587087 HOXA10P31260 410 aaPredicted RBP17.56■□□□□ 0.4
CNN1-206ENST00000587087 ANKRD13DQ6ZTN6 518 aa17.56■□□□□ 0.4
CNN1-206ENST00000587087 NLRP10Q86W26 655 aa17.56■□□□□ 0.4
CNN1-206ENST00000587087 PLBD2Q8NHP8 589 aa17.56■□□□□ 0.4
CNN1-206ENST00000587087 DDX60Q8IY21 1712 aaKnown RBP17.55■□□□□ 0.4
CNN1-206ENST00000587087 WDR90Q96KV7 1748 aa17.55■□□□□ 0.4
CNN1-206ENST00000587087 RTKN2Q8IZC4 609 aa17.55■□□□□ 0.4
CNN1-206ENST00000587087 NLRP3Q96P20 1036 aa17.55■□□□□ 0.4
CNN1-206ENST00000587087 RRAGCQ9HB90 399 aa17.55■□□□□ 0.4
CNN1-206ENST00000587087 HSPA6P17066 643 aa17.54■□□□□ 0.4
CNN1-206ENST00000587087 FKBP4Q02790 459 aaKnown RBP eCLIP17.54■□□□□ 0.4
CNN1-206ENST00000587087 NCBP3Q53F19 620 aaKnown RBP17.54■□□□□ 0.4
CNN1-206ENST00000587087 SLC10A5Q5PT55 438 aa17.54■□□□□ 0.4
CNN1-206ENST00000587087 DPY19L2Q6NUT2 758 aa17.54■□□□□ 0.4
CNN1-206ENST00000587087 OLFM4Q6UX06 510 aa17.54■□□□□ 0.4
CNN1-206ENST00000587087 WWC1Q8IX03 1113 aa17.54■□□□□ 0.4
CNN1-206ENST00000587087 C8orf58Q8NAV2 365 aa17.54■□□□□ 0.4
CNN1-206ENST00000587087 RBM17Q96I25 401 aaKnown RBP17.54■□□□□ 0.4
CNN1-206ENST00000587087 CHMP4AQ9BY43 222 aa17.54■□□□□ 0.4
CNN1-206ENST00000587087 TRMT112Q9UI30 125 aaKnown RBP17.54■□□□□ 0.4
CNN1-206ENST00000587087 C3orf67Q6ZVT6 689 aa17.53■□□□□ 0.4
CNN1-206ENST00000587087 RBM46Q8TBY0 533 aaKnown RBP17.53■□□□□ 0.4
CNN1-206ENST00000587087 TSR2Q969E8 191 aaKnown RBP17.53■□□□□ 0.4
CNN1-206ENST00000587087 CRAMP1Q96RY5 1269 aa17.53■□□□□ 0.4
CNN1-206ENST00000587087 TAF1P21675 1872 aa17.52■□□□□ 0.4
CNN1-206ENST00000587087 SH3TC1Q8TE82 1336 aa17.52■□□□□ 0.4
CNN1-206ENST00000587087 CACNA1FO60840 1977 aa17.52■□□□□ 0.4
CNN1-206ENST00000587087 CC2D2BQ6DHV5 1058 aa17.52■□□□□ 0.4
CNN1-206ENST00000587087 SNED1Q8TER0 1413 aa17.52■□□□□ 0.4
CNN1-206ENST00000587087 IL16Q14005 1332 aa17.51■□□□□ 0.39
CNN1-206ENST00000587087 PPEF1O14829 653 aaPredicted RBP17.51■□□□□ 0.39
CNN1-206ENST00000587087 VEGFAP15692 232 aaPredicted RBP17.51■□□□□ 0.39
CNN1-206ENST00000587087 GOLGA2Q08379 1002 aa17.51■□□□□ 0.39
CNN1-206ENST00000587087 CCDC30Q5VVM6 783 aa17.51■□□□□ 0.39
CNN1-206ENST00000587087 ISCA1Q9BUE6 129 aa17.51■□□□□ 0.39
CNN1-206ENST00000587087 ZNF277Q9NRM2 450 aaPredicted RBP17.51■□□□□ 0.39
CNN1-206ENST00000587087 HCLS1P14317 486 aaPredicted RBP17.5■□□□□ 0.39
CNN1-206ENST00000587087 GRIPAP1Q4V328 841 aa17.5■□□□□ 0.39
CNN1-206ENST00000587087 RIC3Q7Z5B4 369 aa17.5■□□□□ 0.39
CNN1-206ENST00000587087 TSPYL6Q8N831 410 aa17.5■□□□□ 0.39
CNN1-206ENST00000587087 PHAXQ9H814 394 aaKnown RBP17.5■□□□□ 0.39
CNN1-206ENST00000587087 ABCC4O15439 1325 aa17.49■□□□□ 0.39
CNN1-206ENST00000587087 SCN4AP35499 1836 aa17.49■□□□□ 0.39
CNN1-206ENST00000587087 ATP5J2-PTCD1G3V325 749 aa17.49■□□□□ 0.39
CNN1-206ENST00000587087 SYNE4Q8N205 404 aa17.49■□□□□ 0.39
CNN1-206ENST00000587087 ZNF428Q96B54 188 aa17.49■□□□□ 0.39
CNN1-206ENST00000587087 PSMD1Q99460 953 aa17.49■□□□□ 0.39
CNN1-206ENST00000587087 IARSP41252 1262 aaKnown RBP17.48■□□□□ 0.39
CNN1-206ENST00000587087 FSTL1Q12841 308 aa17.48■□□□□ 0.39
CNN1-206ENST00000587087 TCERG1O14776 1098 aaKnown RBP17.47■□□□□ 0.39
CNN1-206ENST00000587087 DDX58O95786 925 aaKnown RBP17.47■□□□□ 0.39
CNN1-206ENST00000587087 TRIM28Q13263 835 aaKnown RBP17.47■□□□□ 0.39
CNN1-206ENST00000587087 TWISTNBQ3B726 338 aaPredicted RBP17.47■□□□□ 0.39
CNN1-206ENST00000587087 FAM9BQ8IZU0 186 aa17.47■□□□□ 0.39
CNN1-206ENST00000587087 STK31Q9BXU1 1019 aa17.47■□□□□ 0.39
CNN1-206ENST00000587087 TMX4Q9H1E5 349 aaPredicted RBP17.47■□□□□ 0.39
CNN1-206ENST00000587087 SALL2Q9Y467 1007 aaPredicted RBP17.47■□□□□ 0.39
CNN1-206ENST00000587087 DDNO94850 711 aaPredicted RBP17.46■□□□□ 0.39
CNN1-206ENST00000587087 DDX46Q7L014 1031 aaKnown RBP17.46■□□□□ 0.39
CNN1-206ENST00000587087 WDR63Q8IWG1 891 aa17.46■□□□□ 0.39
CNN1-206ENST00000587087 SMC1BQ8NDV3 1235 aa17.46■□□□□ 0.39
CNN1-206ENST00000587087 FAM89AQ96GI7 184 aa17.46■□□□□ 0.39
CNN1-206ENST00000587087 ATP6V0A2Q9Y487 856 aa17.46■□□□□ 0.39
CNN1-206ENST00000587087 LRRC37AA6NMS7 1700 aa17.46■□□□□ 0.39
CNN1-206ENST00000587087 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.38
CNN1-206ENST00000587087 POTECB2RU33 542 aa17.45■□□□□ 0.38
CNN1-206ENST00000587087 APLP1P51693 650 aa17.45■□□□□ 0.38
CNN1-206ENST00000587087 MYD88Q99836 296 aa17.45■□□□□ 0.38
CNN1-206ENST00000587087 MYH3P11055 1940 aa17.45■□□□□ 0.38
CNN1-206ENST00000587087 CEP350Q5VT06 3117 aa17.44■□□□□ 0.38
CNN1-206ENST00000587087 BBOX1O75936 387 aa17.44■□□□□ 0.38
CNN1-206ENST00000587087 RTL5Q5HYW3 569 aaPredicted RBP17.44■□□□□ 0.38
CNN1-206ENST00000587087 SLC51AQ86UW1 340 aa17.44■□□□□ 0.38
CNN1-206ENST00000587087 JDP2Q8WYK2 163 aa17.44■□□□□ 0.38
CNN1-206ENST00000587087 ZNF541Q9H0D2 1346 aa17.44■□□□□ 0.38
CNN1-206ENST00000587087 COL4A5P29400 1685 aa17.43■□□□□ 0.38
CNN1-206ENST00000587087 GRAPQ13588 217 aa17.43■□□□□ 0.38
CNN1-206ENST00000587087 ZBTB38Q8NAP3 1195 aaPredicted RBP17.43■□□□□ 0.38
CNN1-206ENST00000587087 CCDC191Q8NCU4 936 aa17.43■□□□□ 0.38
CNN1-206ENST00000587087 GRAPLQ8TC17 118 aaPredicted RBP17.43■□□□□ 0.38
CNN1-206ENST00000587087 L3MBTL3Q96JM7 780 aaPredicted RBP17.43■□□□□ 0.38
CNN1-206ENST00000587087 METTL22Q9BUU2 404 aaPredicted RBP17.43■□□□□ 0.38
CNN1-206ENST00000587087 IQCA1LA6NCM1 817 aa17.42■□□□□ 0.38
CNN1-206ENST00000587087 FZD9O00144 591 aa17.42■□□□□ 0.38
CNN1-206ENST00000587087 IRS4O14654 1257 aaPredicted RBP17.42■□□□□ 0.38
CNN1-206ENST00000587087 SF3B3Q15393 1217 aaKnown RBP17.42■□□□□ 0.38
CNN1-206ENST00000587087 KSR2Q6VAB6 950 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms