RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 CACNA1SQ13698 1873 aa24.72■■□□□ 1.55
CLPTM1-206ENST00000586975 IBTKQ9P2D0 1353 aaPredicted RBP24.71■■□□□ 1.55
CLPTM1-206ENST00000586975 LTBP3Q9NS15 1303 aa24.71■■□□□ 1.55
CLPTM1-206ENST00000586975 CRY2Q49AN0 593 aa24.7■■□□□ 1.54
CLPTM1-206ENST00000586975 DPY19L2Q6NUT2 758 aa24.7■■□□□ 1.54
CLPTM1-206ENST00000586975 TNRC6CQ9HCJ0 1690 aaKnown RBP24.69■■□□□ 1.54
CLPTM1-206ENST00000586975 TCERG1O14776 1098 aaKnown RBP24.69■■□□□ 1.54
CLPTM1-206ENST00000586975 TCIRG1Q13488 830 aa24.69■■□□□ 1.54
CLPTM1-206ENST00000586975 NLRP3Q96P20 1036 aa24.69■■□□□ 1.54
CLPTM1-206ENST00000586975 ANKRD13DQ6ZTN6 518 aa24.68■■□□□ 1.54
CLPTM1-206ENST00000586975 C3orf67Q6ZVT6 689 aa24.68■■□□□ 1.54
CLPTM1-206ENST00000586975 NLRP10Q86W26 655 aa24.68■■□□□ 1.54
CLPTM1-206ENST00000586975 RTKN2Q8IZC4 609 aa24.68■■□□□ 1.54
CLPTM1-206ENST00000586975 RBM17Q96I25 401 aaKnown RBP24.68■■□□□ 1.54
CLPTM1-206ENST00000586975 ZNF277Q9NRM2 450 aaPredicted RBP24.68■■□□□ 1.54
CLPTM1-206ENST00000586975 FKBP4Q02790 459 aaKnown RBP eCLIP24.67■■□□□ 1.54
CLPTM1-206ENST00000586975 RBM46Q8TBY0 533 aaKnown RBP24.67■■□□□ 1.54
CLPTM1-206ENST00000586975 HYPKQ9NX55 129 aa24.67■■□□□ 1.54
CLPTM1-206ENST00000586975 TRMT112Q9UI30 125 aaKnown RBP24.67■■□□□ 1.54
CLPTM1-206ENST00000586975 CEP350Q5VT06 3117 aa24.67■■□□□ 1.54
CLPTM1-206ENST00000586975 FER1L6Q2WGJ9 1857 aa24.66■■□□□ 1.54
CLPTM1-206ENST00000586975 VEGFAP15692 232 aaPredicted RBP24.66■■□□□ 1.54
CLPTM1-206ENST00000586975 PLBD2Q8NHP8 589 aa24.66■■□□□ 1.54
CLPTM1-206ENST00000586975 CCDC88AQ3V6T2 1871 aa24.66■■□□□ 1.54
CLPTM1-206ENST00000586975 HCLS1P14317 486 aaPredicted RBP24.65■■□□□ 1.54
CLPTM1-206ENST00000586975 HOXA10P31260 410 aaPredicted RBP24.65■■□□□ 1.54
CLPTM1-206ENST00000586975 TIAM2Q8IVF5 1701 aa24.65■■□□□ 1.54
CLPTM1-206ENST00000586975 SYNE4Q8N205 404 aa24.65■■□□□ 1.54
CLPTM1-206ENST00000586975 C8orf58Q8NAV2 365 aa24.65■■□□□ 1.54
CLPTM1-206ENST00000586975 ARFGEF2Q9Y6D5 1785 aa24.65■■□□□ 1.54
CLPTM1-206ENST00000586975 RIC1Q4ADV7 1423 aa24.64■■□□□ 1.54
CLPTM1-206ENST00000586975 SALL2Q9Y467 1007 aaPredicted RBP24.64■■□□□ 1.54
CLPTM1-206ENST00000586975 ATP5J2-PTCD1G3V325 749 aa24.63■■□□□ 1.53
CLPTM1-206ENST00000586975 PPEF1O14829 653 aaPredicted RBP24.63■■□□□ 1.53
CLPTM1-206ENST00000586975 SLC10A5Q5PT55 438 aa24.63■■□□□ 1.53
CLPTM1-206ENST00000586975 TSR2Q969E8 191 aaKnown RBP24.63■■□□□ 1.53
CLPTM1-206ENST00000586975 CRAMP1Q96RY5 1269 aa24.63■■□□□ 1.53
CLPTM1-206ENST00000586975 DDNO94850 711 aaPredicted RBP24.62■■□□□ 1.53
CLPTM1-206ENST00000586975 RIC3Q7Z5B4 369 aa24.62■■□□□ 1.53
CLPTM1-206ENST00000586975 RNF123Q5XPI4 1314 aa24.61■■□□□ 1.53
CLPTM1-206ENST00000586975 SH3TC1Q8TE82 1336 aa24.61■■□□□ 1.53
CLPTM1-206ENST00000586975 WWC1Q8IX03 1113 aa24.61■■□□□ 1.53
CLPTM1-206ENST00000586975 TMX4Q9H1E5 349 aaPredicted RBP24.61■■□□□ 1.53
CLPTM1-206ENST00000586975 PHAXQ9H814 394 aaKnown RBP24.61■■□□□ 1.53
CLPTM1-206ENST00000586975 IARSP41252 1262 aaKnown RBP24.6■■□□□ 1.53
CLPTM1-206ENST00000586975 APLP1P51693 650 aa24.6■■□□□ 1.53
CLPTM1-206ENST00000586975 GOLGA2Q08379 1002 aa24.6■■□□□ 1.53
CLPTM1-206ENST00000586975 FSTL1Q12841 308 aa24.6■■□□□ 1.53
CLPTM1-206ENST00000586975 CC2D2BQ6DHV5 1058 aa24.6■■□□□ 1.53
CLPTM1-206ENST00000586975 SLC51AQ86UW1 340 aa24.6■■□□□ 1.53
CLPTM1-206ENST00000586975 CCDC27Q2M243 656 aa24.59■■□□□ 1.53
CLPTM1-206ENST00000586975 RTL5Q5HYW3 569 aaPredicted RBP24.59■■□□□ 1.53
CLPTM1-206ENST00000586975 TSPYL6Q8N831 410 aa24.59■■□□□ 1.53
CLPTM1-206ENST00000586975 SMC1BQ8NDV3 1235 aa24.59■■□□□ 1.53
CLPTM1-206ENST00000586975 POTECB2RU33 542 aa24.58■■□□□ 1.53
CLPTM1-206ENST00000586975 CCDC30Q5VVM6 783 aa24.58■■□□□ 1.53
CLPTM1-206ENST00000586975 FAM89AQ96GI7 184 aa24.58■■□□□ 1.53
CLPTM1-206ENST00000586975 ISCA1Q9BUE6 129 aa24.58■■□□□ 1.53
CLPTM1-206ENST00000586975 ABCC4O15439 1325 aa24.58■■□□□ 1.52
CLPTM1-206ENST00000586975 PSMD1Q99460 953 aa24.57■■□□□ 1.52
CLPTM1-206ENST00000586975 DDX46Q7L014 1031 aaKnown RBP24.56■■□□□ 1.52
CLPTM1-206ENST00000586975 FAM9BQ8IZU0 186 aa24.56■■□□□ 1.52
CLPTM1-206ENST00000586975 JDP2Q8WYK2 163 aa24.56■■□□□ 1.52
CLPTM1-206ENST00000586975 CHMP4AQ9BY43 222 aa24.56■■□□□ 1.52
CLPTM1-206ENST00000586975 ANKRD36CQ5JPF3 1778 aa24.56■■□□□ 1.52
CLPTM1-206ENST00000586975 DICER1Q9UPY3 1922 aaKnown RBP24.55■■□□□ 1.52
CLPTM1-206ENST00000586975 MYD88Q99836 296 aa24.55■■□□□ 1.52
CLPTM1-206ENST00000586975 ZNF541Q9H0D2 1346 aa24.55■■□□□ 1.52
CLPTM1-206ENST00000586975 GRIPAP1Q4V328 841 aa24.54■■□□□ 1.52
CLPTM1-206ENST00000586975 ATP6V0A2Q9Y487 856 aa24.54■■□□□ 1.52
CLPTM1-206ENST00000586975 DDX58O95786 925 aaKnown RBP24.53■■□□□ 1.52
CLPTM1-206ENST00000586975 HTRA3P83110 453 aa24.53■■□□□ 1.52
CLPTM1-206ENST00000586975 LARGE2Q8N3Y3 721 aa24.53■■□□□ 1.52
CLPTM1-206ENST00000586975 BBOX1O75936 387 aa24.52■■□□□ 1.52
CLPTM1-206ENST00000586975 TWISTNBQ3B726 338 aaPredicted RBP24.52■■□□□ 1.52
CLPTM1-206ENST00000586975 STK31Q9BXU1 1019 aa24.52■■□□□ 1.52
CLPTM1-206ENST00000586975 WDR90Q96KV7 1748 aa24.52■■□□□ 1.52
CLPTM1-206ENST00000586975 SNED1Q8TER0 1413 aa24.52■■□□□ 1.52
CLPTM1-206ENST00000586975 IQCA1LA6NCM1 817 aa24.51■■□□□ 1.51
CLPTM1-206ENST00000586975 IL16Q14005 1332 aa24.51■■□□□ 1.51
CLPTM1-206ENST00000586975 FZD9O00144 591 aa24.5■■□□□ 1.51
CLPTM1-206ENST00000586975 IRS4O14654 1257 aaPredicted RBP24.5■■□□□ 1.51
CLPTM1-206ENST00000586975 TRIM28Q13263 835 aaKnown RBP24.5■■□□□ 1.51
CLPTM1-206ENST00000586975 GRAPQ13588 217 aa24.5■■□□□ 1.51
CLPTM1-206ENST00000586975 GRAPLQ8TC17 118 aaPredicted RBP24.5■■□□□ 1.51
CLPTM1-206ENST00000586975 GJA3Q9Y6H8 435 aa24.5■■□□□ 1.51
CLPTM1-206ENST00000586975 PPIP5K2O43314 1243 aa24.49■■□□□ 1.51
CLPTM1-206ENST00000586975 EIF6P56537 245 aaKnown RBP24.49■■□□□ 1.51
CLPTM1-206ENST00000586975 DPP8Q6V1X1 898 aaPredicted RBP24.49■■□□□ 1.51
CLPTM1-206ENST00000586975 SP8Q8IXZ3 490 aa24.49■■□□□ 1.51
CLPTM1-206ENST00000586975 MAP3K2Q9Y2U5 619 aa24.49■■□□□ 1.51
CLPTM1-206ENST00000586975 POTEIP0CG38 1075 aa24.48■■□□□ 1.51
CLPTM1-206ENST00000586975 POTEJP0CG39 1038 aa24.48■■□□□ 1.51
CLPTM1-206ENST00000586975 NCBP3Q53F19 620 aaKnown RBP24.48■■□□□ 1.51
CLPTM1-206ENST00000586975 JARID2Q92833 1246 aaPredicted RBP24.48■■□□□ 1.51
CLPTM1-206ENST00000586975 L3MBTL3Q96JM7 780 aaPredicted RBP24.48■■□□□ 1.51
CLPTM1-206ENST00000586975 FANCIQ9NVI1 1328 aa24.47■■□□□ 1.51
CLPTM1-206ENST00000586975 AOC3Q16853 763 aa24.47■■□□□ 1.51
CLPTM1-206ENST00000586975 EAPPQ56P03 285 aaPredicted RBP24.47■■□□□ 1.51
CLPTM1-206ENST00000586975 NIM1KQ8IY84 436 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms