RNA–Protein interactions for RNA: ENST00000586913.1

RFX1-202, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-202ENST00000586913 HOXA10P31260 410 aaPredicted RBP22.14■■□□□ 1.13
RFX1-202ENST00000586913 C7orf43Q8WVR3 580 aa22.14■■□□□ 1.13
RFX1-202ENST00000586913 ISCA1Q9BUE6 129 aa22.14■■□□□ 1.13
RFX1-202ENST00000586913 ANKRD36CQ5JPF3 1778 aa22.14■■□□□ 1.13
RFX1-202ENST00000586913 LTBP3Q9NS15 1303 aa22.13■■□□□ 1.13
RFX1-202ENST00000586913 FANCIQ9NVI1 1328 aa22.13■■□□□ 1.13
RFX1-202ENST00000586913 CCER2I3L3R5 266 aa22.13■■□□□ 1.13
RFX1-202ENST00000586913 TRIM28Q13263 835 aaKnown RBP22.13■■□□□ 1.13
RFX1-202ENST00000586913 TWISTNBQ3B726 338 aaPredicted RBP22.13■■□□□ 1.13
RFX1-202ENST00000586913 RNF181Q9P0P0 153 aa22.13■■□□□ 1.13
RFX1-202ENST00000586913 SALL2Q9Y467 1007 aaPredicted RBP22.13■■□□□ 1.13
RFX1-202ENST00000586913 SLX4Q8IY92 1834 aa22.13■■□□□ 1.13
RFX1-202ENST00000586913 SBF1O95248 1867 aa22.12■■□□□ 1.13
RFX1-202ENST00000586913 TNRC6CQ9HCJ0 1690 aaKnown RBP22.12■■□□□ 1.13
RFX1-202ENST00000586913 RASSF7Q02833 373 aa22.12■■□□□ 1.13
RFX1-202ENST00000586913 GOLGA2Q08379 1002 aa22.12■■□□□ 1.13
RFX1-202ENST00000586913 NLRP3Q96P20 1036 aa22.12■■□□□ 1.13
RFX1-202ENST00000586913 PHAXQ9H814 394 aaKnown RBP22.12■■□□□ 1.13
RFX1-202ENST00000586913 SH3TC1Q8TE82 1336 aa22.1■■□□□ 1.13
RFX1-202ENST00000586913 DDX58O95786 925 aaKnown RBP22.1■■□□□ 1.13
RFX1-202ENST00000586913 RIC3Q7Z5B4 369 aa22.1■■□□□ 1.13
RFX1-202ENST00000586913 RPGRQ92834 1020 aaKnown RBP22.1■■□□□ 1.13
RFX1-202ENST00000586913 CRAMP1Q96RY5 1269 aa22.1■■□□□ 1.13
RFX1-202ENST00000586913 STK31Q9BXU1 1019 aa22.1■■□□□ 1.13
RFX1-202ENST00000586913 TRMT112Q9UI30 125 aaKnown RBP22.1■■□□□ 1.13
RFX1-202ENST00000586913 FER1L6Q2WGJ9 1857 aa22.09■■□□□ 1.13
RFX1-202ENST00000586913 PRELPP51888 382 aa22.09■■□□□ 1.13
RFX1-202ENST00000586913 CCDC93Q567U6 631 aa22.09■■□□□ 1.13
RFX1-202ENST00000586913 TAOK3Q9H2K8 898 aa22.09■■□□□ 1.13
RFX1-202ENST00000586913 MYH16Q9H6N6 1097 aa22.09■■□□□ 1.13
RFX1-202ENST00000586913 ZNF219Q9P2Y4 722 aaPredicted RBP22.09■■□□□ 1.13
RFX1-202ENST00000586913 ZNF521Q96K83 1311 aa22.08■■□□□ 1.13
RFX1-202ENST00000586913 CC2D2BQ6DHV5 1058 aa22.08■■□□□ 1.13
RFX1-202ENST00000586913 RBM17Q96I25 401 aaKnown RBP22.08■■□□□ 1.13
RFX1-202ENST00000586913 VAMP4O75379 141 aa22.07■■□□□ 1.12
RFX1-202ENST00000586913 RTKN2Q8IZC4 609 aa22.07■■□□□ 1.12
RFX1-202ENST00000586913 ZNF526Q8TF50 670 aaPredicted RBP22.07■■□□□ 1.12
RFX1-202ENST00000586913 SPINK5Q9NQ38 1064 aaPredicted RBP22.07■■□□□ 1.12
RFX1-202ENST00000586913 ATP5J2-PTCD1G3V325 749 aa22.06■■□□□ 1.12
RFX1-202ENST00000586913 C1QTNF8P60827 252 aa22.06■■□□□ 1.12
RFX1-202ENST00000586913 GRIPAP1Q4V328 841 aa22.06■■□□□ 1.12
RFX1-202ENST00000586913 C3orf67Q6ZVT6 689 aa22.06■■□□□ 1.12
RFX1-202ENST00000586913 KSR2Q6VAB6 950 aa22.05■■□□□ 1.12
RFX1-202ENST00000586913 METTL22Q9BUU2 404 aaPredicted RBP22.05■■□□□ 1.12
RFX1-202ENST00000586913 CACNA1SQ13698 1873 aa22.05■■□□□ 1.12
RFX1-202ENST00000586913 KDM2BQ8NHM5 1336 aa22.05■■□□□ 1.12
RFX1-202ENST00000586913 EXOSC9Q06265 439 aaKnown RBP22.04■■□□□ 1.12
RFX1-202ENST00000586913 SYNE4Q8N205 404 aa22.04■■□□□ 1.12
RFX1-202ENST00000586913 CCDC191Q8NCU4 936 aa22.04■■□□□ 1.12
RFX1-202ENST00000586913 KIF3CO14782 793 aa22.03■■□□□ 1.12
RFX1-202ENST00000586913 SLC4A2P04920 1241 aa22.03■■□□□ 1.12
RFX1-202ENST00000586913 HCLS1P14317 486 aaPredicted RBP22.03■■□□□ 1.12
RFX1-202ENST00000586913 FKBP4Q02790 459 aaKnown RBP eCLIP22.03■■□□□ 1.12
RFX1-202ENST00000586913 ZBTB38Q8NAP3 1195 aaPredicted RBP22.02■■□□□ 1.12
RFX1-202ENST00000586913 FAM89AQ96GI7 184 aa22.02■■□□□ 1.12
RFX1-202ENST00000586913 MYD88Q99836 296 aa22.02■■□□□ 1.12
RFX1-202ENST00000586913 SNED1Q8TER0 1413 aa22.02■■□□□ 1.12
RFX1-202ENST00000586913 PI4KAP2A4QPH2 592 aa22.01■■□□□ 1.11
RFX1-202ENST00000586913 BBOX1O75936 387 aa22.01■■□□□ 1.11
RFX1-202ENST00000586913 HSP90B1P14625 803 aaKnown RBP22.01■■□□□ 1.11
RFX1-202ENST00000586913 SF3B3Q15393 1217 aaKnown RBP22.01■■□□□ 1.11
RFX1-202ENST00000586913 PI4KAP1Q8N8J0 262 aa22.01■■□□□ 1.11
RFX1-202ENST00000586913 PSMD1Q99460 953 aa22.01■■□□□ 1.11
RFX1-202ENST00000586913 MAP3K2Q9Y2U5 619 aa22.01■■□□□ 1.11
RFX1-202ENST00000586913 GLTPD2A6NH11 291 aa22■■□□□ 1.11
RFX1-202ENST00000586913 TCERG1O14776 1098 aaKnown RBP22■■□□□ 1.11
RFX1-202ENST00000586913 PPEF1O14829 653 aaPredicted RBP22■■□□□ 1.11
RFX1-202ENST00000586913 OLFM4Q6UX06 510 aa22■■□□□ 1.11
RFX1-202ENST00000586913 CWC25Q9NXE8 425 aaPredicted RBP22■■□□□ 1.11
RFX1-202ENST00000586913 CCDC88AQ3V6T2 1871 aa22■■□□□ 1.11
RFX1-202ENST00000586913 DICER1Q9UPY3 1922 aaKnown RBP22■■□□□ 1.11
RFX1-202ENST00000586913 PCCAP05165 728 aaPredicted RBP21.99■■□□□ 1.11
RFX1-202ENST00000586913 FLIIQ13045 1269 aa21.99■■□□□ 1.11
RFX1-202ENST00000586913 DDX46Q7L014 1031 aaKnown RBP21.99■■□□□ 1.11
RFX1-202ENST00000586913 G2E3Q7L622 706 aa21.99■■□□□ 1.11
RFX1-202ENST00000586913 ATP6V0A2Q9Y487 856 aa21.99■■□□□ 1.11
RFX1-202ENST00000586913 CACNA1FO60840 1977 aa21.99■■□□□ 1.11
RFX1-202ENST00000586913 ABCC4O15439 1325 aa21.99■■□□□ 1.11
RFX1-202ENST00000586913 NEXNQ0ZGT2 675 aa21.98■■□□□ 1.11
RFX1-202ENST00000586913 DPY19L2Q6NUT2 758 aa21.98■■□□□ 1.11
RFX1-202ENST00000586913 NMRK2Q9NPI5 230 aa21.98■■□□□ 1.11
RFX1-202ENST00000586913 LAMB2P55268 1798 aa21.97■■□□□ 1.11
RFX1-202ENST00000586913 E9PSI1 815 aa21.97■■□□□ 1.11
RFX1-202ENST00000586913 IRS4O14654 1257 aaPredicted RBP21.97■■□□□ 1.11
RFX1-202ENST00000586913 GRAPQ13588 217 aa21.97■■□□□ 1.11
RFX1-202ENST00000586913 TMC4Q7Z404 712 aa21.97■■□□□ 1.11
RFX1-202ENST00000586913 GRAPLQ8TC17 118 aaPredicted RBP21.97■■□□□ 1.11
RFX1-202ENST00000586913 TMX4Q9H1E5 349 aaPredicted RBP21.97■■□□□ 1.11
RFX1-202ENST00000586913 TIAM2Q8IVF5 1701 aa21.97■■□□□ 1.11
RFX1-202ENST00000586913 TOMM70O94826 608 aa21.96■■□□□ 1.11
RFX1-202ENST00000586913 IGKV5-2P06315 115 aa21.96■■□□□ 1.11
RFX1-202ENST00000586913 SP8Q8IXZ3 490 aa21.96■■□□□ 1.11
RFX1-202ENST00000586913 DDX60Q8IY21 1712 aaKnown RBP21.96■■□□□ 1.11
RFX1-202ENST00000586913 IARSP41252 1262 aaKnown RBP21.95■■□□□ 1.1
RFX1-202ENST00000586913 DIEXFQ68CQ4 756 aaKnown RBP21.95■■□□□ 1.1
RFX1-202ENST00000586913 ZNF428Q96B54 188 aa21.95■■□□□ 1.1
RFX1-202ENST00000586913 ZNF277Q9NRM2 450 aaPredicted RBP21.95■■□□□ 1.1
RFX1-202ENST00000586913 FKBP5Q13451 457 aaPredicted RBP21.94■■□□□ 1.1
RFX1-202ENST00000586913 RTL5Q5HYW3 569 aaPredicted RBP21.94■■□□□ 1.1
RFX1-202ENST00000586913 VPS33BQ9H267 617 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms