RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 TM4SF1P30408 202 aa23.04■■□□□ 1.28
RETREG3-205ENST00000586870 NFIXQ14938 502 aa23.04■■□□□ 1.28
RETREG3-205ENST00000586870 SETDB2Q96T68 719 aa23.04■■□□□ 1.28
RETREG3-205ENST00000586870 LAMB4A4D0S4 1761 aa23.03■■□□□ 1.28
RETREG3-205ENST00000586870 ERVV-1B6SEH8 477 aa23.03■■□□□ 1.28
RETREG3-205ENST00000586870 NPHP1O15259 732 aa23.03■■□□□ 1.28
RETREG3-205ENST00000586870 TBC1D9BQ66K14 1250 aa23.03■■□□□ 1.28
RETREG3-205ENST00000586870 MAP3K15Q6ZN16 1313 aa23.03■■□□□ 1.28
RETREG3-205ENST00000586870 FKBP5Q13451 457 aaPredicted RBP23.02■■□□□ 1.28
RETREG3-205ENST00000586870 ANP32EQ9BTT0 268 aa23.02■■□□□ 1.28
RETREG3-205ENST00000586870 PXDNLA1KZ92 1463 aa23.02■■□□□ 1.28
RETREG3-205ENST00000586870 F6X3S4 739 aa23.01■■□□□ 1.27
RETREG3-205ENST00000586870 ANKRD45Q5TZF3 282 aa23.01■■□□□ 1.27
RETREG3-205ENST00000586870 DCTPP1Q9H773 170 aa23.01■■□□□ 1.27
RETREG3-205ENST00000586870 ATP10DQ9P241 1426 aa23.01■■□□□ 1.27
RETREG3-205ENST00000586870 HLFQ16534 295 aa23■■□□□ 1.27
RETREG3-205ENST00000586870 SLC4A10Q6U841 1118 aa23■■□□□ 1.27
RETREG3-205ENST00000586870 MEIS3Q99687 375 aa23■■□□□ 1.27
RETREG3-205ENST00000586870 POLRMTO00411 1230 aaKnown RBP23■■□□□ 1.27
RETREG3-205ENST00000586870 RGL2O15211 777 aa23■■□□□ 1.27
RETREG3-205ENST00000586870 SERPINB2P05120 415 aa23■■□□□ 1.27
RETREG3-205ENST00000586870 DDR1Q08345 913 aa23■■□□□ 1.27
RETREG3-205ENST00000586870 CEP85Q6P2H3 762 aa23■■□□□ 1.27
RETREG3-205ENST00000586870 LRP10Q7Z4F1 713 aa23■■□□□ 1.27
RETREG3-205ENST00000586870 SYT17Q9BSW7 474 aa23■■□□□ 1.27
RETREG3-205ENST00000586870 LNPKQ9C0E8 428 aa23■■□□□ 1.27
RETREG3-205ENST00000586870 NIP7Q9Y221 180 aaKnown RBP eCLIP23■■□□□ 1.27
RETREG3-205ENST00000586870 N4BP2Q86UW6 1770 aaPredicted RBP22.99■■□□□ 1.27
RETREG3-205ENST00000586870 C4AP0C0L4 1744 aa22.99■■□□□ 1.27
RETREG3-205ENST00000586870 ANKRD13DQ6ZTN6 518 aa22.98■■□□□ 1.27
RETREG3-205ENST00000586870 CD2APQ9Y5K6 639 aa22.98■■□□□ 1.27
RETREG3-205ENST00000586870 GNAI3P08754 354 aa22.97■■□□□ 1.27
RETREG3-205ENST00000586870 GIGYF2Q6Y7W6 1299 aaKnown RBP22.97■■□□□ 1.27
RETREG3-205ENST00000586870 PHAXQ9H814 394 aaKnown RBP22.97■■□□□ 1.27
RETREG3-205ENST00000586870 DDX58O95786 925 aaKnown RBP22.97■■□□□ 1.27
RETREG3-205ENST00000586870 RIC3Q7Z5B4 369 aa22.97■■□□□ 1.27
RETREG3-205ENST00000586870 FAM177BA6PVY3 158 aa22.96■■□□□ 1.27
RETREG3-205ENST00000586870 HMMRO75330 724 aa22.96■■□□□ 1.27
RETREG3-205ENST00000586870 HSP90AB3PQ58FF7 597 aa22.96■■□□□ 1.27
RETREG3-205ENST00000586870 NBPF5PQ86XG9 351 aaPredicted RBP22.96■■□□□ 1.27
RETREG3-205ENST00000586870 PLBD2Q8NHP8 589 aa22.96■■□□□ 1.27
RETREG3-205ENST00000586870 CARMIL3Q8ND23 1372 aa22.95■■□□□ 1.27
RETREG3-205ENST00000586870 DCAF8L1A6NGE4 600 aa22.95■■□□□ 1.26
RETREG3-205ENST00000586870 GTF2E1P29083 439 aaPredicted RBP22.95■■□□□ 1.26
RETREG3-205ENST00000586870 GNAI2P04899 355 aa22.94■■□□□ 1.26
RETREG3-205ENST00000586870 GPTP24298 496 aa22.94■■□□□ 1.26
RETREG3-205ENST00000586870 UPF2Q9HAU5 1272 aaKnown RBP22.94■■□□□ 1.26
RETREG3-205ENST00000586870 SEC24BO95487 1268 aa22.93■■□□□ 1.26
RETREG3-205ENST00000586870 TPTE2Q6XPS3 522 aa22.93■■□□□ 1.26
RETREG3-205ENST00000586870 CNBD1Q8NA66 436 aa22.93■■□□□ 1.26
RETREG3-205ENST00000586870 ST5P78524 1137 aa22.92■■□□□ 1.26
RETREG3-205ENST00000586870 TCIRG1Q13488 830 aa22.91■■□□□ 1.26
RETREG3-205ENST00000586870 BMP2KLQ5H9B9 411 aa22.91■■□□□ 1.26
RETREG3-205ENST00000586870 NLGN2Q8NFZ4 835 aa22.91■■□□□ 1.26
RETREG3-205ENST00000586870 PARP10Q53GL7 1025 aa22.9■■□□□ 1.26
RETREG3-205ENST00000586870 PPP1R42Q7Z4L9 355 aa22.9■■□□□ 1.26
RETREG3-205ENST00000586870 NYXQ9GZU5 481 aa22.9■■□□□ 1.26
RETREG3-205ENST00000586870 COL24A1Q17RW2 1714 aa22.9■■□□□ 1.26
RETREG3-205ENST00000586870 TGFB2P61812 414 aa22.9■■□□□ 1.26
RETREG3-205ENST00000586870 ZNF34Q8IZ26 560 aa22.9■■□□□ 1.26
RETREG3-205ENST00000586870 PRR5LQ6MZQ0 368 aa22.89■■□□□ 1.25
RETREG3-205ENST00000586870 CCDC24Q8N4L8 307 aa22.89■■□□□ 1.25
RETREG3-205ENST00000586870 SRCIN1Q9C0H9 1055 aa22.89■■□□□ 1.25
RETREG3-205ENST00000586870 SCN7AQ01118 1682 aa22.89■■□□□ 1.25
RETREG3-205ENST00000586870 KSR2Q6VAB6 950 aa22.88■■□□□ 1.25
RETREG3-205ENST00000586870 PI4KAP2A4QPH2 592 aa22.87■■□□□ 1.25
RETREG3-205ENST00000586870 SUSD4Q5VX71 490 aa22.87■■□□□ 1.25
RETREG3-205ENST00000586870 PI4KAP1Q8N8J0 262 aa22.87■■□□□ 1.25
RETREG3-205ENST00000586870 DNAAF4Q8WXU2 420 aa22.87■■□□□ 1.25
RETREG3-205ENST00000586870 MAP3K2Q9Y2U5 619 aa22.87■■□□□ 1.25
RETREG3-205ENST00000586870 A0A0G2JLW4 131 aa22.86■■□□□ 1.25
RETREG3-205ENST00000586870 ATP5J2-PTCD1G3V325 749 aa22.86■■□□□ 1.25
RETREG3-205ENST00000586870 PDE6BP35913 854 aa22.86■■□□□ 1.25
RETREG3-205ENST00000586870 ATP8B2P98198 1209 aa22.86■■□□□ 1.25
RETREG3-205ENST00000586870 NEXNQ0ZGT2 675 aa22.86■■□□□ 1.25
RETREG3-205ENST00000586870 UTP14AQ9BVJ6 771 aaKnown RBP22.86■■□□□ 1.25
RETREG3-205ENST00000586870 USP44Q9H0E7 712 aa22.86■■□□□ 1.25
RETREG3-205ENST00000586870 MYD88Q99836 296 aa22.86■■□□□ 1.25
RETREG3-205ENST00000586870 BRIP1Q9BX63 1249 aa22.86■■□□□ 1.25
RETREG3-205ENST00000586870 C10orf71Q711Q0 1435 aa22.85■■□□□ 1.25
RETREG3-205ENST00000586870 GPR162Q16538 588 aa22.85■■□□□ 1.25
RETREG3-205ENST00000586870 TBC1D32Q96NH3 1257 aa22.85■■□□□ 1.25
RETREG3-205ENST00000586870 UBN2Q6ZU65 1347 aa22.85■■□□□ 1.25
RETREG3-205ENST00000586870 H0YIN7 160 aa22.84■■□□□ 1.25
RETREG3-205ENST00000586870 UBTFL1P0CB47 393 aaPredicted RBP22.84■■□□□ 1.25
RETREG3-205ENST00000586870 DPEP1P16444 411 aa22.84■■□□□ 1.25
RETREG3-205ENST00000586870 BEND3Q5T5X7 828 aa22.84■■□□□ 1.25
RETREG3-205ENST00000586870 NLRP10Q86W26 655 aa22.84■■□□□ 1.25
RETREG3-205ENST00000586870 NUTM1Q86Y26 1132 aa22.84■■□□□ 1.25
RETREG3-205ENST00000586870 METTL22Q9BUU2 404 aaPredicted RBP22.84■■□□□ 1.25
RETREG3-205ENST00000586870 DAXXQ9UER7 740 aaPredicted RBP22.84■■□□□ 1.25
RETREG3-205ENST00000586870 TRMT112Q9UI30 125 aaKnown RBP22.84■■□□□ 1.25
RETREG3-205ENST00000586870 WWC3Q9ULE0 1092 aa22.84■■□□□ 1.25
RETREG3-205ENST00000586870 BCORQ6W2J9 1755 aa22.84■■□□□ 1.25
RETREG3-205ENST00000586870 C2CD5Q86YS7 1000 aa22.83■■□□□ 1.25
RETREG3-205ENST00000586870 PLEKHM2Q8IWE5 1019 aa22.83■■□□□ 1.25
RETREG3-205ENST00000586870 CHRNA5P30532 468 aa22.82■■□□□ 1.24
RETREG3-205ENST00000586870 ADCY9O60503 1353 aa22.82■■□□□ 1.24
RETREG3-205ENST00000586870 ERFEQ4G0M1 354 aa22.82■■□□□ 1.24
RETREG3-205ENST00000586870 ISCA1Q9BUE6 129 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms