RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 CCDC191Q8NCU4 936 aa17.97■□□□□ 0.47
TPM4-205ENST00000586833 NLRP3Q96P20 1036 aa17.97■□□□□ 0.47
TPM4-205ENST00000586833 ATP5J2-PTCD1G3V325 749 aa17.96■□□□□ 0.47
TPM4-205ENST00000586833 NPR1P16066 1061 aa17.96■□□□□ 0.47
TPM4-205ENST00000586833 ALDH1B1P30837 517 aa17.96■□□□□ 0.47
TPM4-205ENST00000586833 ERFEQ4G0M1 354 aa17.96■□□□□ 0.47
TPM4-205ENST00000586833 NUTM1Q86Y26 1132 aa17.96■□□□□ 0.47
TPM4-205ENST00000586833 CCDC24Q8N4L8 307 aa17.96■□□□□ 0.47
TPM4-205ENST00000586833 RPGRQ92834 1020 aaKnown RBP17.96■□□□□ 0.47
TPM4-205ENST00000586833 CWC25Q9NXE8 425 aaPredicted RBP17.96■□□□□ 0.47
TPM4-205ENST00000586833 SOGA3Q5TF21 947 aa17.95■□□□□ 0.46
TPM4-205ENST00000586833 DNAAF4Q8WXU2 420 aa17.95■□□□□ 0.46
TPM4-205ENST00000586833 SRGNP10124 158 aa17.94■□□□□ 0.46
TPM4-205ENST00000586833 KCNA3P22001 575 aa17.94■□□□□ 0.46
TPM4-205ENST00000586833 SLC10A5Q5PT55 438 aa17.94■□□□□ 0.46
TPM4-205ENST00000586833 RBM17Q96I25 401 aaKnown RBP17.94■□□□□ 0.46
TPM4-205ENST00000586833 TMX4Q9H1E5 349 aaPredicted RBP17.94■□□□□ 0.46
TPM4-205ENST00000586833 SMC4Q9NTJ3 1288 aa17.94■□□□□ 0.46
TPM4-205ENST00000586833 WWC3Q9ULE0 1092 aa17.94■□□□□ 0.46
TPM4-205ENST00000586833 RIC1Q4ADV7 1423 aa17.94■□□□□ 0.46
TPM4-205ENST00000586833 PTPRCP08575 1304 aa17.94■□□□□ 0.46
TPM4-205ENST00000586833 KLRG2A4D1S0 409 aaPredicted RBP17.93■□□□□ 0.46
TPM4-205ENST00000586833 YBX3P16989 372 aaKnown RBP eCLIP17.93■□□□□ 0.46
TPM4-205ENST00000586833 G2E3Q7L622 706 aa17.93■□□□□ 0.46
TPM4-205ENST00000586833 ZBTB38Q8NAP3 1195 aaPredicted RBP17.93■□□□□ 0.46
TPM4-205ENST00000586833 NRXN2Q9P2S2 1712 aa17.92■□□□□ 0.46
TPM4-205ENST00000586833 MRPL50Q8N5N7 158 aaKnown RBP17.91■□□□□ 0.46
TPM4-205ENST00000586833 LINS1Q8NG48 757 aa17.91■□□□□ 0.46
TPM4-205ENST00000586833 ADCY9O60503 1353 aa17.91■□□□□ 0.46
TPM4-205ENST00000586833 ABCC12Q96J65 1359 aa17.91■□□□□ 0.46
TPM4-205ENST00000586833 IRS4O14654 1257 aaPredicted RBP17.9■□□□□ 0.46
TPM4-205ENST00000586833 PCCAP05165 728 aaPredicted RBP17.9■□□□□ 0.46
TPM4-205ENST00000586833 CRY2Q49AN0 593 aa17.9■□□□□ 0.46
TPM4-205ENST00000586833 ARHGAP27Q6ZUM4 889 aa17.9■□□□□ 0.46
TPM4-205ENST00000586833 SSH1Q8WYL5 1049 aa17.9■□□□□ 0.46
TPM4-205ENST00000586833 FAM89AQ96GI7 184 aa17.9■□□□□ 0.46
TPM4-205ENST00000586833 KIF13BQ9NQT8 1826 aa17.89■□□□□ 0.45
TPM4-205ENST00000586833 DDX46Q7L014 1031 aaKnown RBP17.89■□□□□ 0.45
TPM4-205ENST00000586833 KIF16BQ96L93 1317 aa17.89■□□□□ 0.45
TPM4-205ENST00000586833 NEURL1BA8MQ27 555 aa17.88■□□□□ 0.45
TPM4-205ENST00000586833 HCLS1P14317 486 aaPredicted RBP17.88■□□□□ 0.45
TPM4-205ENST00000586833 GRIPAP1Q4V328 841 aa17.88■□□□□ 0.45
TPM4-205ENST00000586833 PRPF40BQ6NWY9 871 aaKnown RBP17.88■□□□□ 0.45
TPM4-205ENST00000586833 CRAMP1Q96RY5 1269 aa17.88■□□□□ 0.45
TPM4-205ENST00000586833 API5Q9BZZ5 524 aaKnown RBP17.88■□□□□ 0.45
TPM4-205ENST00000586833 IPO8O15397 1037 aaKnown RBP17.87■□□□□ 0.45
TPM4-205ENST00000586833 ALDH1L1O75891 902 aa17.87■□□□□ 0.45
TPM4-205ENST00000586833 HOXA10P31260 410 aaPredicted RBP17.87■□□□□ 0.45
TPM4-205ENST00000586833 BRPF1P55201 1214 aaPredicted RBP17.87■□□□□ 0.45
TPM4-205ENST00000586833 CC2D2BQ6DHV5 1058 aa17.87■□□□□ 0.45
TPM4-205ENST00000586833 SLC4A10Q6U841 1118 aa17.87■□□□□ 0.45
TPM4-205ENST00000586833 BCL2L13Q9BXK5 485 aa17.87■□□□□ 0.45
TPM4-205ENST00000586833 SRCIN1Q9C0H9 1055 aa17.87■□□□□ 0.45
TPM4-205ENST00000586833 PDE8AO60658 829 aa17.86■□□□□ 0.45
TPM4-205ENST00000586833 IGKV5-2P06315 115 aa17.86■□□□□ 0.45
TPM4-205ENST00000586833 YY1P25490 414 aa17.86■□□□□ 0.45
TPM4-205ENST00000586833 RARSP54136 660 aaKnown RBP17.86■□□□□ 0.45
TPM4-205ENST00000586833 CWF19L2Q2TBE0 894 aaKnown RBP17.86■□□□□ 0.45
TPM4-205ENST00000586833 CCDC152Q4G0S7 254 aa17.86■□□□□ 0.45
TPM4-205ENST00000586833 CCDC93Q567U6 631 aa17.86■□□□□ 0.45
TPM4-205ENST00000586833 TMC4Q7Z404 712 aa17.86■□□□□ 0.45
TPM4-205ENST00000586833 CDHR2Q9BYE9 1310 aa17.86■□□□□ 0.45
TPM4-205ENST00000586833 F6X3S4 739 aa17.85■□□□□ 0.45
TPM4-205ENST00000586833 C21orf2O43822 256 aa17.85■□□□□ 0.45
TPM4-205ENST00000586833 GCKRQ14397 625 aa17.85■□□□□ 0.45
TPM4-205ENST00000586833 RTL5Q5HYW3 569 aaPredicted RBP17.85■□□□□ 0.45
TPM4-205ENST00000586833 RTKN2Q8IZC4 609 aa17.85■□□□□ 0.45
TPM4-205ENST00000586833 AFDNP55196 1824 aaKnown RBP17.84■□□□□ 0.45
TPM4-205ENST00000586833 BBOX1O75936 387 aa17.84■□□□□ 0.45
TPM4-205ENST00000586833 SF3B3Q15393 1217 aaKnown RBP17.84■□□□□ 0.45
TPM4-205ENST00000586833 BEND3Q5T5X7 828 aa17.84■□□□□ 0.45
TPM4-205ENST00000586833 C9orf78Q9NZ63 289 aaPredicted RBP17.84■□□□□ 0.45
TPM4-205ENST00000586833 NUP98P52948 1817 aa17.84■□□□□ 0.45
TPM4-205ENST00000586833 H7C1W4 665 aa17.83■□□□□ 0.44
TPM4-205ENST00000586833 PPEF1O14829 653 aaPredicted RBP17.83■□□□□ 0.44
TPM4-205ENST00000586833 GRAPQ13588 217 aa17.83■□□□□ 0.44
TPM4-205ENST00000586833 GRAPLQ8TC17 118 aaPredicted RBP17.83■□□□□ 0.44
TPM4-205ENST00000586833 ARHGAP45Q92619 1136 aa17.83■□□□□ 0.44
TPM4-205ENST00000586833 ZNF219Q9P2Y4 722 aaPredicted RBP17.83■□□□□ 0.44
TPM4-205ENST00000586833 HDAC5Q9UQL6 1122 aa17.83■□□□□ 0.44
TPM4-205ENST00000586833 CCT4P50991 539 aaKnown RBP17.82■□□□□ 0.44
TPM4-205ENST00000586833 UBE3BQ7Z3V4 1068 aa17.82■□□□□ 0.44
TPM4-205ENST00000586833 SYNE4Q8N205 404 aa17.82■□□□□ 0.44
TPM4-205ENST00000586833 NOB1Q9ULX3 412 aaKnown RBP17.82■□□□□ 0.44
TPM4-205ENST00000586833 TAOK3Q9H2K8 898 aa17.81■□□□□ 0.44
TPM4-205ENST00000586833 ABCC4O15439 1325 aa17.8■□□□□ 0.44
TPM4-205ENST00000586833 GRM8O00222 908 aa17.8■□□□□ 0.44
TPM4-205ENST00000586833 LMNB1P20700 586 aa17.8■□□□□ 0.44
TPM4-205ENST00000586833 CTSWP56202 376 aa17.8■□□□□ 0.44
TPM4-205ENST00000586833 C3orf67Q6ZVT6 689 aa17.8■□□□□ 0.44
TPM4-205ENST00000586833 CDC5LQ99459 802 aaKnown RBP17.8■□□□□ 0.44
TPM4-205ENST00000586833 ARFGEF2Q9Y6D5 1785 aa17.8■□□□□ 0.44
TPM4-205ENST00000586833 KIAA1551Q9HCM1 1747 aa17.8■□□□□ 0.44
TPM4-205ENST00000586833 ANKRD36CQ5JPF3 1778 aa17.79■□□□□ 0.44
TPM4-205ENST00000586833 N4BP2Q86UW6 1770 aaPredicted RBP17.79■□□□□ 0.44
TPM4-205ENST00000586833 PLA2G12BQ9BX93 195 aa17.79■□□□□ 0.44
TPM4-205ENST00000586833 LTBP3Q9NS15 1303 aa17.78■□□□□ 0.44
TPM4-205ENST00000586833 FKBP4Q02790 459 aaKnown RBP eCLIP17.78■□□□□ 0.44
TPM4-205ENST00000586833 SP8Q8IXZ3 490 aa17.78■□□□□ 0.44
TPM4-205ENST00000586833 SUPT20HQ8NEM7 779 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms