RNA–Protein interactions for RNA: ENST00000586545.5

PIK3C3-204, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 1 (best) BASIC

Gene PIK3C3, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-204ENST00000586545 ZNF541Q9H0D2 1346 aa11.18□□□□□ -0.62
PIK3C3-204ENST00000586545 TRPM7Q96QT4 1865 aa11.17□□□□□ -0.62
PIK3C3-204ENST00000586545 NPHP1O15259 732 aa11.17□□□□□ -0.62
PIK3C3-204ENST00000586545 CCDC93Q567U6 631 aa11.17□□□□□ -0.62
PIK3C3-204ENST00000586545 ANKRD36CQ5JPF3 1778 aa11.17□□□□□ -0.62
PIK3C3-204ENST00000586545 RGL2O15211 777 aa11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 NPR1P16066 1061 aa11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 PPP2R1AP30153 589 aa11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 HLFQ16534 295 aa11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 NPM2Q86SE8 214 aaKnown RBP11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 CFAP53Q96M91 514 aa11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 TAF1DQ9H5J8 278 aaPredicted RBP11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 SCUBE2Q9NQ36 999 aa11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 CNTNAP1P78357 1384 aa11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 ABCC12Q96J65 1359 aa11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 U2AF1L5P0DN76 240 aaPredicted RBP11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 U2AF1Q01081 240 aaKnown RBP eCLIP11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 FKBP4Q02790 459 aaKnown RBP eCLIP11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 MKRN1Q9UHC7 482 aaKnown RBP11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 NIP7Q9Y221 180 aaKnown RBP eCLIP11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 ZNF652Q9Y2D9 606 aa11.16□□□□□ -0.62
PIK3C3-204ENST00000586545 THSD7BQ9C0I4 1608 aa11.15□□□□□ -0.62
PIK3C3-204ENST00000586545 ITGBL1O95965 494 aaPredicted RBP11.15□□□□□ -0.62
PIK3C3-204ENST00000586545 LDHDQ86WU2 507 aa11.15□□□□□ -0.62
PIK3C3-204ENST00000586545 RTF1Q92541 710 aaKnown RBP11.15□□□□□ -0.62
PIK3C3-204ENST00000586545 ZNF277Q9NRM2 450 aaPredicted RBP11.15□□□□□ -0.62
PIK3C3-204ENST00000586545 NUDCQ9Y266 331 aa11.15□□□□□ -0.62
PIK3C3-204ENST00000586545 RIC1Q4ADV7 1423 aa11.14□□□□□ -0.63
PIK3C3-204ENST00000586545 IQCA1LA6NCM1 817 aa11.14□□□□□ -0.63
PIK3C3-204ENST00000586545 HTATSF1O43719 755 aaKnown RBP11.14□□□□□ -0.63
PIK3C3-204ENST00000586545 TPTE2Q6XPS3 522 aa11.14□□□□□ -0.63
PIK3C3-204ENST00000586545 FAM177BA6PVY3 158 aa11.13□□□□□ -0.63
PIK3C3-204ENST00000586545 FZD9O00144 591 aa11.13□□□□□ -0.63
PIK3C3-204ENST00000586545 MMRN1Q13201 1228 aa11.13□□□□□ -0.63
PIK3C3-204ENST00000586545 CRY2Q49AN0 593 aa11.13□□□□□ -0.63
PIK3C3-204ENST00000586545 MIS18AQ9NYP9 233 aa11.13□□□□□ -0.63
PIK3C3-204ENST00000586545 TAF1P21675 1872 aa11.13□□□□□ -0.63
PIK3C3-204ENST00000586545 FOXN1O15353 648 aa11.12□□□□□ -0.63
PIK3C3-204ENST00000586545 IARSP41252 1262 aaKnown RBP11.12□□□□□ -0.63
PIK3C3-204ENST00000586545 TAF7Q15545 349 aaPredicted RBP11.12□□□□□ -0.63
PIK3C3-204ENST00000586545 SLC51AQ86UW1 340 aa11.12□□□□□ -0.63
PIK3C3-204ENST00000586545 RTKN2Q8IZC4 609 aa11.12□□□□□ -0.63
PIK3C3-204ENST00000586545 METRNQ9UJH8 293 aa11.12□□□□□ -0.63
PIK3C3-204ENST00000586545 IBTKQ9P2D0 1353 aaPredicted RBP11.12□□□□□ -0.63
PIK3C3-204ENST00000586545 UBN2Q6ZU65 1347 aa11.12□□□□□ -0.63
PIK3C3-204ENST00000586545 SYNE4Q8N205 404 aa11.11□□□□□ -0.63
PIK3C3-204ENST00000586545 HACL1Q9UJ83 578 aa11.11□□□□□ -0.63
PIK3C3-204ENST00000586545 RNF123Q5XPI4 1314 aa11.11□□□□□ -0.63
PIK3C3-204ENST00000586545 MAP3K15Q6ZN16 1313 aa11.11□□□□□ -0.63
PIK3C3-204ENST00000586545 ALDH1B1P30837 517 aa11.11□□□□□ -0.63
PIK3C3-204ENST00000586545 EPHX2P34913 555 aa11.11□□□□□ -0.63
PIK3C3-204ENST00000586545 VEGFBP49765 207 aa11.11□□□□□ -0.63
PIK3C3-204ENST00000586545 EAPPQ56P03 285 aaPredicted RBP11.11□□□□□ -0.63
PIK3C3-204ENST00000586545 TTLL7Q6ZT98 887 aa11.11□□□□□ -0.63
PIK3C3-204ENST00000586545 NUTM1Q86Y26 1132 aa11.11□□□□□ -0.63
PIK3C3-204ENST00000586545 PSMD1Q99460 953 aa11.11□□□□□ -0.63
PIK3C3-204ENST00000586545 TMEM88BA6NKF7 163 aa11.1□□□□□ -0.63
PIK3C3-204ENST00000586545 ERVV-1B6SEH8 477 aa11.1□□□□□ -0.63
PIK3C3-204ENST00000586545 EIF4A1P60842 406 aaKnown RBP11.1□□□□□ -0.63
PIK3C3-204ENST00000586545 PLEKHF1Q96S99 279 aa11.1□□□□□ -0.63
PIK3C3-204ENST00000586545 DDX60Q8IY21 1712 aaKnown RBP11.09□□□□□ -0.63
PIK3C3-204ENST00000586545 C7P10643 843 aa11.09□□□□□ -0.63
PIK3C3-204ENST00000586545 HOXA10P31260 410 aaPredicted RBP11.09□□□□□ -0.63
PIK3C3-204ENST00000586545 MAP1SQ66K74 1059 aaPredicted RBP11.09□□□□□ -0.63
PIK3C3-204ENST00000586545 GPC2Q8N158 579 aa11.09□□□□□ -0.63
PIK3C3-204ENST00000586545 NGEFQ8N5V2 710 aa11.09□□□□□ -0.63
PIK3C3-204ENST00000586545 SLC39A7Q92504 469 aa11.09□□□□□ -0.63
PIK3C3-204ENST00000586545 THUMPD2Q9BTF0 503 aaKnown RBP11.09□□□□□ -0.63
PIK3C3-204ENST00000586545 LRRC37AA6NMS7 1700 aa11.09□□□□□ -0.63
PIK3C3-204ENST00000586545 C3orf67Q6ZVT6 689 aa11.08□□□□□ -0.64
PIK3C3-204ENST00000586545 NYXQ9GZU5 481 aa11.08□□□□□ -0.64
PIK3C3-204ENST00000586545 PRDM10Q9NQV6 1147 aa11.08□□□□□ -0.64
PIK3C3-204ENST00000586545 RASSF10A6NK89 507 aa11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 NTSR2O95665 410 aa11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 GPTP24298 496 aa11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 GTF2E1P29083 439 aaPredicted RBP11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 SUSD4Q5VX71 490 aa11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 LRP10Q7Z4F1 713 aa11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 PNMA8AQ86V59 439 aaPredicted RBP11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 ZNF34Q8IZ26 560 aa11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 CNTROBQ8N137 903 aa11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 PNISRQ8TF01 805 aaKnown RBP11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 ZBTB3Q9H5J0 574 aa11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 WBP1LQ9NX94 342 aa11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 RRP7AQ9Y3A4 280 aaKnown RBP11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 MYL6BP14649 208 aa11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 SCNN1DP51172 638 aa11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 NFE2L2Q16236 605 aa11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 CC2D2BQ6DHV5 1058 aa11.07□□□□□ -0.64
PIK3C3-204ENST00000586545 POLR2AP24928 1970 aaKnown RBP11.06□□□□□ -0.64
PIK3C3-204ENST00000586545 CTCFP49711 727 aaPredicted RBP11.06□□□□□ -0.64
PIK3C3-204ENST00000586545 FMR1Q06787 632 aaKnown RBP eCLIP11.06□□□□□ -0.64
PIK3C3-204ENST00000586545 GIGYF2Q6Y7W6 1299 aaKnown RBP11.06□□□□□ -0.64
PIK3C3-204ENST00000586545 KIF6Q6ZMV9 814 aa11.06□□□□□ -0.64
PIK3C3-204ENST00000586545 JDP2Q8WYK2 163 aa11.06□□□□□ -0.64
PIK3C3-204ENST00000586545 RPGRQ92834 1020 aaKnown RBP11.06□□□□□ -0.64
PIK3C3-204ENST00000586545 CRAMP1Q96RY5 1269 aa11.06□□□□□ -0.64
PIK3C3-204ENST00000586545 DUOX1Q9NRD9 1551 aa11.06□□□□□ -0.64
PIK3C3-204ENST00000586545 ERBB4Q15303 1308 aa11.05□□□□□ -0.64
PIK3C3-204ENST00000586545 PPEF1O14829 653 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms