RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-204ENST00000585630 KDM2BQ8NHM5 1336 aa21.41■■□□□ 1.02
CIRBP-204ENST00000585630 C7orf43Q8WVR3 580 aa21.41■■□□□ 1.02
CIRBP-204ENST00000585630 TAOK3Q9H2K8 898 aa21.41■■□□□ 1.02
CIRBP-204ENST00000585630 WDR90Q96KV7 1748 aa21.41■■□□□ 1.02
CIRBP-204ENST00000585630 SNED1Q8TER0 1413 aa21.4■■□□□ 1.02
CIRBP-204ENST00000585630 NCBP3Q53F19 620 aaKnown RBP21.4■■□□□ 1.02
CIRBP-204ENST00000585630 NMRK2Q9NPI5 230 aa21.4■■□□□ 1.02
CIRBP-204ENST00000585630 CCDC93Q567U6 631 aa21.39■■□□□ 1.01
CIRBP-204ENST00000585630 HYPKQ9NX55 129 aa21.39■■□□□ 1.01
CIRBP-204ENST00000585630 CACNA1FO60840 1977 aa21.38■■□□□ 1.01
CIRBP-204ENST00000585630 ALDH1B1P30837 517 aa21.38■■□□□ 1.01
CIRBP-204ENST00000585630 NLRP10Q86W26 655 aa21.38■■□□□ 1.01
CIRBP-204ENST00000585630 WWC1Q8IX03 1113 aa21.38■■□□□ 1.01
CIRBP-204ENST00000585630 PLBD2Q8NHP8 589 aa21.38■■□□□ 1.01
CIRBP-204ENST00000585630 UTP14AQ9BVJ6 771 aaKnown RBP21.38■■□□□ 1.01
CIRBP-204ENST00000585630 CEP350Q5VT06 3117 aa21.38■■□□□ 1.01
CIRBP-204ENST00000585630 TCIRG1Q13488 830 aa21.37■■□□□ 1.01
CIRBP-204ENST00000585630 RPGRQ92834 1020 aaKnown RBP21.37■■□□□ 1.01
CIRBP-204ENST00000585630 IL16Q14005 1332 aa21.36■■□□□ 1.01
CIRBP-204ENST00000585630 LRRC37AA6NMS7 1700 aa21.36■■□□□ 1.01
CIRBP-204ENST00000585630 HOXA10P31260 410 aaPredicted RBP21.36■■□□□ 1.01
CIRBP-204ENST00000585630 C8orf58Q8NAV2 365 aa21.36■■□□□ 1.01
CIRBP-204ENST00000585630 ANKRD13DQ6ZTN6 518 aa21.35■■□□□ 1.01
CIRBP-204ENST00000585630 C3orf67Q6ZVT6 689 aa21.35■■□□□ 1.01
CIRBP-204ENST00000585630 TSR2Q969E8 191 aaKnown RBP21.35■■□□□ 1.01
CIRBP-204ENST00000585630 TAF1P21675 1872 aa21.35■■□□□ 1.01
CIRBP-204ENST00000585630 ELL2O00472 640 aaPredicted RBP21.34■■□□□ 1.01
CIRBP-204ENST00000585630 TOMM70O94826 608 aa21.34■■□□□ 1.01
CIRBP-204ENST00000585630 SLC10A5Q5PT55 438 aa21.34■■□□□ 1.01
CIRBP-204ENST00000585630 C16orf71Q8IYS4 520 aaPredicted RBP21.34■■□□□ 1.01
CIRBP-204ENST00000585630 GLTPD2A6NH11 291 aa21.33■■□□□ 1.01
CIRBP-204ENST00000585630 FKBP4Q02790 459 aaKnown RBP eCLIP21.33■■□□□ 1.01
CIRBP-204ENST00000585630 OLFM4Q6UX06 510 aa21.33■■□□□ 1.01
CIRBP-204ENST00000585630 CRAMP1Q96RY5 1269 aa21.33■■□□□ 1.01
CIRBP-204ENST00000585630 SH3TC1Q8TE82 1336 aa21.32■■□□□ 1
CIRBP-204ENST00000585630 HSPA6P17066 643 aa21.32■■□□□ 1
CIRBP-204ENST00000585630 RTKN2Q8IZC4 609 aa21.32■■□□□ 1
CIRBP-204ENST00000585630 TSPYL6Q8N831 410 aa21.32■■□□□ 1
CIRBP-204ENST00000585630 NLRP3Q96P20 1036 aa21.32■■□□□ 1
CIRBP-204ENST00000585630 ISCA1Q9BUE6 129 aa21.32■■□□□ 1
CIRBP-204ENST00000585630 CHMP4AQ9BY43 222 aa21.32■■□□□ 1
CIRBP-204ENST00000585630 GOLGA2Q08379 1002 aa21.31■■□□□ 1
CIRBP-204ENST00000585630 CCDC30Q5VVM6 783 aa21.31■■□□□ 1
CIRBP-204ENST00000585630 RBM17Q96I25 401 aaKnown RBP21.31■■□□□ 1
CIRBP-204ENST00000585630 TRMT112Q9UI30 125 aaKnown RBP21.31■■□□□ 1
CIRBP-204ENST00000585630 SCN4AP35499 1836 aa21.31■■□□□ 1
CIRBP-204ENST00000585630 CC2D2BQ6DHV5 1058 aa21.3■■□□□ 1
CIRBP-204ENST00000585630 PHAXQ9H814 394 aaKnown RBP21.3■■□□□ 1
CIRBP-204ENST00000585630 RRAGCQ9HB90 399 aa21.3■■□□□ 1
CIRBP-204ENST00000585630 FANCIQ9NVI1 1328 aa21.29■■□□□ 1
CIRBP-204ENST00000585630 MYH3P11055 1940 aa21.29■■□□□ 1
CIRBP-204ENST00000585630 PPEF1O14829 653 aaPredicted RBP21.29■■□□□ 1
CIRBP-204ENST00000585630 SYNE4Q8N205 404 aa21.29■■□□□ 1
CIRBP-204ENST00000585630 RBM46Q8TBY0 533 aaKnown RBP21.29■■□□□ 1
CIRBP-204ENST00000585630 PSMD1Q99460 953 aa21.29■■□□□ 1
CIRBP-204ENST00000585630 ABCC4O15439 1325 aa21.29■■□□□ 1
CIRBP-204ENST00000585630 COL4A5P29400 1685 aa21.28■■□□□ 1
CIRBP-204ENST00000585630 HCLS1P14317 486 aaPredicted RBP21.28■■□□□ 1
CIRBP-204ENST00000585630 TRIM28Q13263 835 aaKnown RBP21.28■■□□□ 1
CIRBP-204ENST00000585630 ZNF277Q9NRM2 450 aaPredicted RBP21.28■■□□□ 1
CIRBP-204ENST00000585630 ATP5J2-PTCD1G3V325 749 aa21.27■■□□□ 1
CIRBP-204ENST00000585630 TWISTNBQ3B726 338 aaPredicted RBP21.27■■□□□ 1
CIRBP-204ENST00000585630 DPY19L2Q6NUT2 758 aa21.27■■□□□ 1
CIRBP-204ENST00000585630 RIC3Q7Z5B4 369 aa21.27■■□□□ 1
CIRBP-204ENST00000585630 WDR63Q8IWG1 891 aa21.27■■□□□ 1
CIRBP-204ENST00000585630 COL4A1P02462 1669 aa21.26■□□□□ 0.99
CIRBP-204ENST00000585630 GRIPAP1Q4V328 841 aa21.26■□□□□ 0.99
CIRBP-204ENST00000585630 SLC51AQ86UW1 340 aa21.26■□□□□ 0.99
CIRBP-204ENST00000585630 FAM9BQ8IZU0 186 aa21.26■□□□□ 0.99
CIRBP-204ENST00000585630 LTBP1Q14766 1721 aa21.26■□□□□ 0.99
CIRBP-204ENST00000585630 VEGFAP15692 232 aaPredicted RBP21.25■□□□□ 0.99
CIRBP-204ENST00000585630 IARSP41252 1262 aaKnown RBP21.25■□□□□ 0.99
CIRBP-204ENST00000585630 DUOX1Q9NRD9 1551 aa21.25■□□□□ 0.99
CIRBP-204ENST00000585630 DDX58O95786 925 aaKnown RBP21.24■□□□□ 0.99
CIRBP-204ENST00000585630 ZNF428Q96B54 188 aa21.24■□□□□ 0.99
CIRBP-204ENST00000585630 FAM89AQ96GI7 184 aa21.24■□□□□ 0.99
CIRBP-204ENST00000585630 STK31Q9BXU1 1019 aa21.24■□□□□ 0.99
CIRBP-204ENST00000585630 SALL2Q9Y467 1007 aaPredicted RBP21.24■□□□□ 0.99
CIRBP-204ENST00000585630 FSTL1Q12841 308 aa21.23■□□□□ 0.99
CIRBP-204ENST00000585630 ATP6V0A2Q9Y487 856 aa21.23■□□□□ 0.99
CIRBP-204ENST00000585630 POTECB2RU33 542 aa21.22■□□□□ 0.99
CIRBP-204ENST00000585630 APLP1P51693 650 aa21.22■□□□□ 0.99
CIRBP-204ENST00000585630 DDX46Q7L014 1031 aaKnown RBP21.22■□□□□ 0.99
CIRBP-204ENST00000585630 MYD88Q99836 296 aa21.22■□□□□ 0.99
CIRBP-204ENST00000585630 METTL22Q9BUU2 404 aaPredicted RBP21.22■□□□□ 0.99
CIRBP-204ENST00000585630 ZNF541Q9H0D2 1346 aa21.22■□□□□ 0.99
CIRBP-204ENST00000585630 ADAMTSL1Q8N6G6 1762 aa21.21■□□□□ 0.99
CIRBP-204ENST00000585630 DDNO94850 711 aaPredicted RBP21.21■□□□□ 0.99
CIRBP-204ENST00000585630 GRAPQ13588 217 aa21.21■□□□□ 0.99
CIRBP-204ENST00000585630 ZBTB38Q8NAP3 1195 aaPredicted RBP21.21■□□□□ 0.99
CIRBP-204ENST00000585630 CCDC191Q8NCU4 936 aa21.21■□□□□ 0.99
CIRBP-204ENST00000585630 GRAPLQ8TC17 118 aaPredicted RBP21.21■□□□□ 0.99
CIRBP-204ENST00000585630 SPEF2Q9C093 1822 aa21.2■□□□□ 0.98
CIRBP-204ENST00000585630 IRS4O14654 1257 aaPredicted RBP21.2■□□□□ 0.98
CIRBP-204ENST00000585630 TCERG1O14776 1098 aaKnown RBP21.2■□□□□ 0.98
CIRBP-204ENST00000585630 BBOX1O75936 387 aa21.2■□□□□ 0.98
CIRBP-204ENST00000585630 SF3B3Q15393 1217 aaKnown RBP21.2■□□□□ 0.98
CIRBP-204ENST00000585630 L3MBTL3Q96JM7 780 aaPredicted RBP21.2■□□□□ 0.98
CIRBP-204ENST00000585630 MAP3K2Q9Y2U5 619 aa21.2■□□□□ 0.98
CIRBP-204ENST00000585630 FZD9O00144 591 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms