RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 NPR1P16066 1061 aa17.67■□□□□ 0.42
PRKCSH-202ENST00000585540 NEXNQ0ZGT2 675 aa17.67■□□□□ 0.42
PRKCSH-202ENST00000585540 SUSD4Q5VX71 490 aa17.67■□□□□ 0.42
PRKCSH-202ENST00000585540 KSR2Q6VAB6 950 aa17.67■□□□□ 0.42
PRKCSH-202ENST00000585540 TRMT2AQ8IZ69 625 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-202ENST00000585540 CCDC191Q8NCU4 936 aa17.67■□□□□ 0.42
PRKCSH-202ENST00000585540 PHAXQ9H814 394 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-202ENST00000585540 SH3TC1Q8TE82 1336 aa17.67■□□□□ 0.42
PRKCSH-202ENST00000585540 CHRNA5P30532 468 aa17.66■□□□□ 0.42
PRKCSH-202ENST00000585540 FLIIQ13045 1269 aa17.66■□□□□ 0.42
PRKCSH-202ENST00000585540 CRY2Q49AN0 593 aa17.66■□□□□ 0.42
PRKCSH-202ENST00000585540 SLC10A5Q5PT55 438 aa17.66■□□□□ 0.42
PRKCSH-202ENST00000585540 METTL22Q9BUU2 404 aaPredicted RBP17.66■□□□□ 0.42
PRKCSH-202ENST00000585540 ALDH1B1P30837 517 aa17.65■□□□□ 0.42
PRKCSH-202ENST00000585540 NLRP3Q96P20 1036 aa17.65■□□□□ 0.42
PRKCSH-202ENST00000585540 LAMB2P55268 1798 aa17.65■□□□□ 0.42
PRKCSH-202ENST00000585540 ABCC12Q96J65 1359 aa17.65■□□□□ 0.42
PRKCSH-202ENST00000585540 ALDH1L2Q3SY69 923 aa17.64■□□□□ 0.41
PRKCSH-202ENST00000585540 FKBP5Q13451 457 aaPredicted RBP17.63■□□□□ 0.41
PRKCSH-202ENST00000585540 ERFEQ4G0M1 354 aa17.63■□□□□ 0.41
PRKCSH-202ENST00000585540 GRIPAP1Q4V328 841 aa17.63■□□□□ 0.41
PRKCSH-202ENST00000585540 CDCA7LQ96GN5 454 aa17.63■□□□□ 0.41
PRKCSH-202ENST00000585540 TRMT112Q9UI30 125 aaKnown RBP17.63■□□□□ 0.41
PRKCSH-202ENST00000585540 TNRC6CQ9HCJ0 1690 aaKnown RBP17.62■□□□□ 0.41
PRKCSH-202ENST00000585540 PI4KAP2A4QPH2 592 aa17.62■□□□□ 0.41
PRKCSH-202ENST00000585540 FAM177BA6PVY3 158 aa17.62■□□□□ 0.41
PRKCSH-202ENST00000585540 NUTM1Q86Y26 1132 aa17.62■□□□□ 0.41
PRKCSH-202ENST00000585540 PI4KAP1Q8N8J0 262 aa17.62■□□□□ 0.41
PRKCSH-202ENST00000585540 ZBTB38Q8NAP3 1195 aaPredicted RBP17.62■□□□□ 0.41
PRKCSH-202ENST00000585540 ZNF622Q969S3 477 aaKnown RBP eCLIP17.62■□□□□ 0.41
PRKCSH-202ENST00000585540 CWC25Q9NXE8 425 aaPredicted RBP17.62■□□□□ 0.41
PRKCSH-202ENST00000585540 MAP3K2Q9Y2U5 619 aa17.62■□□□□ 0.41
PRKCSH-202ENST00000585540 ZBED9Q6R2W3 1325 aa17.62■□□□□ 0.41
PRKCSH-202ENST00000585540 YY1P25490 414 aa17.61■□□□□ 0.41
PRKCSH-202ENST00000585540 HOXA10P31260 410 aaPredicted RBP17.61■□□□□ 0.41
PRKCSH-202ENST00000585540 CC2D2BQ6DHV5 1058 aa17.61■□□□□ 0.41
PRKCSH-202ENST00000585540 DNAAF4Q8WXU2 420 aa17.61■□□□□ 0.41
PRKCSH-202ENST00000585540 RPGRQ92834 1020 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-202ENST00000585540 RBM17Q96I25 401 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-202ENST00000585540 CRAMP1Q96RY5 1269 aa17.61■□□□□ 0.41
PRKCSH-202ENST00000585540 MYD88Q99836 296 aa17.61■□□□□ 0.41
PRKCSH-202ENST00000585540 PTPRCP08575 1304 aa17.61■□□□□ 0.41
PRKCSH-202ENST00000585540 ADCY9O60503 1353 aa17.61■□□□□ 0.41
PRKCSH-202ENST00000585540 PCCAP05165 728 aaPredicted RBP17.6■□□□□ 0.41
PRKCSH-202ENST00000585540 ZC3H4Q9UPT8 1303 aaKnown RBP17.6■□□□□ 0.41
PRKCSH-202ENST00000585540 CDHR2Q9BYE9 1310 aa17.59■□□□□ 0.41
PRKCSH-202ENST00000585540 LTBP3Q9NS15 1303 aa17.59■□□□□ 0.41
PRKCSH-202ENST00000585540 BRPF1P55201 1214 aaPredicted RBP17.59■□□□□ 0.41
PRKCSH-202ENST00000585540 PRPF40BQ6NWY9 871 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-202ENST00000585540 TMC4Q7Z404 712 aa17.59■□□□□ 0.41
PRKCSH-202ENST00000585540 LINS1Q8NG48 757 aa17.59■□□□□ 0.41
PRKCSH-202ENST00000585540 DDX60Q8IY21 1712 aaKnown RBP17.58■□□□□ 0.41
PRKCSH-202ENST00000585540 ATP5J2-PTCD1G3V325 749 aa17.58■□□□□ 0.4
PRKCSH-202ENST00000585540 CCDC93Q567U6 631 aa17.58■□□□□ 0.4
PRKCSH-202ENST00000585540 CCDC24Q8N4L8 307 aa17.58■□□□□ 0.4
PRKCSH-202ENST00000585540 SF3B3Q15393 1217 aaKnown RBP17.57■□□□□ 0.4
PRKCSH-202ENST00000585540 ARHGAP27Q6ZUM4 889 aa17.57■□□□□ 0.4
PRKCSH-202ENST00000585540 G2E3Q7L622 706 aa17.57■□□□□ 0.4
PRKCSH-202ENST00000585540 TMX4Q9H1E5 349 aaPredicted RBP17.57■□□□□ 0.4
PRKCSH-202ENST00000585540 CACNA1SQ13698 1873 aa17.56■□□□□ 0.4
PRKCSH-202ENST00000585540 FER1L6Q2WGJ9 1857 aa17.56■□□□□ 0.4
PRKCSH-202ENST00000585540 NEURL1BA8MQ27 555 aa17.56■□□□□ 0.4
PRKCSH-202ENST00000585540 TCERG1O14776 1098 aaKnown RBP17.56■□□□□ 0.4
PRKCSH-202ENST00000585540 RTKN2Q8IZC4 609 aa17.56■□□□□ 0.4
PRKCSH-202ENST00000585540 SLX4Q8IY92 1834 aa17.56■□□□□ 0.4
PRKCSH-202ENST00000585540 KIF16BQ96L93 1317 aa17.55■□□□□ 0.4
PRKCSH-202ENST00000585540 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
PRKCSH-202ENST00000585540 IGKV5-2P06315 115 aa17.55■□□□□ 0.4
PRKCSH-202ENST00000585540 DDX46Q7L014 1031 aaKnown RBP17.55■□□□□ 0.4
PRKCSH-202ENST00000585540 MRPL50Q8N5N7 158 aaKnown RBP17.55■□□□□ 0.4
PRKCSH-202ENST00000585540 PDE8AO60658 829 aa17.54■□□□□ 0.4
PRKCSH-202ENST00000585540 ALDH1L1O75891 902 aa17.54■□□□□ 0.4
PRKCSH-202ENST00000585540 BBOX1O75936 387 aa17.54■□□□□ 0.4
PRKCSH-202ENST00000585540 C7orf43Q8WVR3 580 aa17.54■□□□□ 0.4
PRKCSH-202ENST00000585540 FAM89AQ96GI7 184 aa17.54■□□□□ 0.4
PRKCSH-202ENST00000585540 WWC3Q9ULE0 1092 aa17.54■□□□□ 0.4
PRKCSH-202ENST00000585540 C21orf2O43822 256 aa17.53■□□□□ 0.4
PRKCSH-202ENST00000585540 LMNB1P20700 586 aa17.53■□□□□ 0.4
PRKCSH-202ENST00000585540 GRAPQ13588 217 aa17.53■□□□□ 0.4
PRKCSH-202ENST00000585540 CCDC152Q4G0S7 254 aa17.53■□□□□ 0.4
PRKCSH-202ENST00000585540 GRAPLQ8TC17 118 aaPredicted RBP17.53■□□□□ 0.4
PRKCSH-202ENST00000585540 SSH1Q8WYL5 1049 aa17.53■□□□□ 0.4
PRKCSH-202ENST00000585540 PLA2G12BQ9BX93 195 aa17.53■□□□□ 0.4
PRKCSH-202ENST00000585540 TAOK3Q9H2K8 898 aa17.53■□□□□ 0.4
PRKCSH-202ENST00000585540 SMC4Q9NTJ3 1288 aa17.53■□□□□ 0.4
PRKCSH-202ENST00000585540 MYH3P11055 1940 aa17.53■□□□□ 0.4
PRKCSH-202ENST00000585540 PPEF1O14829 653 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-202ENST00000585540 HCLS1P14317 486 aaPredicted RBP17.52■□□□□ 0.4
PRKCSH-202ENST00000585540 GCKRQ14397 625 aa17.52■□□□□ 0.4
PRKCSH-202ENST00000585540 SBF1O95248 1867 aa17.52■□□□□ 0.39
PRKCSH-202ENST00000585540 RTL9Q8NET4 1388 aa17.52■□□□□ 0.39
PRKCSH-202ENST00000585540 H7C1W4 665 aa17.51■□□□□ 0.39
PRKCSH-202ENST00000585540 FKBP4Q02790 459 aaKnown RBP eCLIP17.51■□□□□ 0.39
PRKCSH-202ENST00000585540 BEND3Q5T5X7 828 aa17.51■□□□□ 0.39
PRKCSH-202ENST00000585540 YTHDC1Q96MU7 727 aaKnown RBP17.51■□□□□ 0.39
PRKCSH-202ENST00000585540 PSMD1Q99460 953 aa17.51■□□□□ 0.39
PRKCSH-202ENST00000585540 VPS33BQ9H267 617 aa17.51■□□□□ 0.39
PRKCSH-202ENST00000585540 DICER1Q9UPY3 1922 aaKnown RBP17.51■□□□□ 0.39
PRKCSH-202ENST00000585540 ABCC4O15439 1325 aa17.5■□□□□ 0.39
PRKCSH-202ENST00000585540 SNED1Q8TER0 1413 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms