RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 CRY2Q49AN0 593 aa30.16■■■□□ 2.42
LSM7-203ENST00000585409 NGEFQ8N5V2 710 aa30.16■■■□□ 2.42
LSM7-203ENST00000585409 HACL1Q9UJ83 578 aa30.16■■■□□ 2.42
LSM7-203ENST00000585409 IARSP41252 1262 aaKnown RBP30.15■■■□□ 2.42
LSM7-203ENST00000585409 ABCC12Q96J65 1359 aa30.15■■■□□ 2.42
LSM7-203ENST00000585409 MIS18AQ9NYP9 233 aa30.14■■■□□ 2.42
LSM7-203ENST00000585409 TMEM88BA6NKF7 163 aa30.13■■■□□ 2.41
LSM7-203ENST00000585409 ERVV-1B6SEH8 477 aa30.13■■■□□ 2.41
LSM7-203ENST00000585409 EPHX2P34913 555 aa30.13■■■□□ 2.41
LSM7-203ENST00000585409 EAPPQ56P03 285 aaPredicted RBP30.13■■■□□ 2.41
LSM7-203ENST00000585409 SYNE4Q8N205 404 aa30.13■■■□□ 2.41
LSM7-203ENST00000585409 RIC1Q4ADV7 1423 aa30.13■■■□□ 2.41
LSM7-203ENST00000585409 FOXN1O15353 648 aa30.12■■■□□ 2.41
LSM7-203ENST00000585409 GTF2E1P29083 439 aaPredicted RBP30.12■■■□□ 2.41
LSM7-203ENST00000585409 PSMD1Q99460 953 aa30.12■■■□□ 2.41
LSM7-203ENST00000585409 NYXQ9GZU5 481 aa30.12■■■□□ 2.41
LSM7-203ENST00000585409 BABAM1Q9NWV8 329 aa30.12■■■□□ 2.41
LSM7-203ENST00000585409 PNMA8AQ86V59 439 aaPredicted RBP30.11■■■□□ 2.41
LSM7-203ENST00000585409 GPC2Q8N158 579 aa30.11■■■□□ 2.41
LSM7-203ENST00000585409 TRIM35Q9UPQ4 493 aa30.11■■■□□ 2.41
LSM7-203ENST00000585409 RNF123Q5XPI4 1314 aa30.11■■■□□ 2.41
LSM7-203ENST00000585409 COL4A5P29400 1685 aa30.11■■■□□ 2.41
LSM7-203ENST00000585409 VEGFBP49765 207 aa30.1■■■□□ 2.41
LSM7-203ENST00000585409 CCDC27Q2M243 656 aa30.1■■■□□ 2.41
LSM7-203ENST00000585409 THUMPD2Q9BTF0 503 aaKnown RBP30.1■■■□□ 2.41
LSM7-203ENST00000585409 MAP3K15Q6ZN16 1313 aa30.1■■■□□ 2.41
LSM7-203ENST00000585409 NUTM1Q86Y26 1132 aa30.09■■■□□ 2.41
LSM7-203ENST00000585409 IBTKQ9P2D0 1353 aaPredicted RBP30.09■■■□□ 2.41
LSM7-203ENST00000585409 CC2D2BQ6DHV5 1058 aa30.08■■■□□ 2.41
LSM7-203ENST00000585409 HOXA10P31260 410 aaPredicted RBP30.07■■■□□ 2.4
LSM7-203ENST00000585409 EIF4A1P60842 406 aaKnown RBP30.07■■■□□ 2.4
LSM7-203ENST00000585409 PRDM10Q9NQV6 1147 aa30.07■■■□□ 2.4
LSM7-203ENST00000585409 CLEC11AQ9Y240 323 aa30.07■■■□□ 2.4
LSM7-203ENST00000585409 LTBP1Q14766 1721 aa30.07■■■□□ 2.4
LSM7-203ENST00000585409 TTLL7Q6ZT98 887 aa30.06■■■□□ 2.4
LSM7-203ENST00000585409 UBN2Q6ZU65 1347 aa30.05■■■□□ 2.4
LSM7-203ENST00000585409 CNTROBQ8N137 903 aa30.05■■■□□ 2.4
LSM7-203ENST00000585409 JDP2Q8WYK2 163 aa30.05■■■□□ 2.4
LSM7-203ENST00000585409 TSPYL4Q9UJ04 414 aa30.05■■■□□ 2.4
LSM7-203ENST00000585409 MAP1SQ66K74 1059 aaPredicted RBP30.04■■■□□ 2.4
LSM7-203ENST00000585409 RASSF10A6NK89 507 aa30.03■■■□□ 2.4
LSM7-203ENST00000585409 GRIPAP1Q4V328 841 aa30.03■■■□□ 2.4
LSM7-203ENST00000585409 KIF6Q6ZMV9 814 aa30.03■■■□□ 2.4
LSM7-203ENST00000585409 CTCFP49711 727 aaPredicted RBP30.02■■■□□ 2.4
LSM7-203ENST00000585409 RPGRQ92834 1020 aaKnown RBP30.02■■■□□ 2.4
LSM7-203ENST00000585409 WBP1LQ9NX94 342 aa30.02■■■□□ 2.4
LSM7-203ENST00000585409 GPTP24298 496 aa30.01■■■□□ 2.39
LSM7-203ENST00000585409 GNAI1P63096 354 aa30.01■■■□□ 2.39
LSM7-203ENST00000585409 SUSD4Q5VX71 490 aa30.01■■■□□ 2.39
LSM7-203ENST00000585409 ZNF34Q8IZ26 560 aa30.01■■■□□ 2.39
LSM7-203ENST00000585409 AIDAQ96BJ3 306 aa30.01■■■□□ 2.39
LSM7-203ENST00000585409 LAS1LQ9Y4W2 734 aaKnown RBP30.01■■■□□ 2.39
LSM7-203ENST00000585409 MYL6BP14649 208 aa30■■■□□ 2.39
LSM7-203ENST00000585409 EIF6P56537 245 aaKnown RBP30■■■□□ 2.39
LSM7-203ENST00000585409 CFAP44Q96MT7 982 aa30■■■□□ 2.39
LSM7-203ENST00000585409 CRAMP1Q96RY5 1269 aa30■■■□□ 2.39
LSM7-203ENST00000585409 ZBTB3Q9H5J0 574 aa30■■■□□ 2.39
LSM7-203ENST00000585409 NTSR2O95665 410 aa29.99■■■□□ 2.39
LSM7-203ENST00000585409 DEFB115Q30KQ5 88 aa29.99■■■□□ 2.39
LSM7-203ENST00000585409 WWC1Q8IX03 1113 aa29.99■■■□□ 2.39
LSM7-203ENST00000585409 IFT57Q9NWB7 429 aa29.99■■■□□ 2.39
LSM7-203ENST00000585409 ERBB4Q15303 1308 aa29.98■■■□□ 2.39
LSM7-203ENST00000585409 GIGYF2Q6Y7W6 1299 aaKnown RBP29.98■■■□□ 2.39
LSM7-203ENST00000585409 GJA3Q9Y6H8 435 aa29.98■■■□□ 2.39
LSM7-203ENST00000585409 CHL1O00533 1208 aa29.97■■■□□ 2.39
LSM7-203ENST00000585409 SCNN1DP51172 638 aa29.97■■■□□ 2.39
LSM7-203ENST00000585409 SLC51AQ86UW1 340 aa29.97■■■□□ 2.39
LSM7-203ENST00000585409 RBM17Q96I25 401 aaKnown RBP29.97■■■□□ 2.39
LSM7-203ENST00000585409 TRPM7Q96QT4 1865 aa29.97■■■□□ 2.39
LSM7-203ENST00000585409 IL16Q14005 1332 aa29.96■■■□□ 2.39
LSM7-203ENST00000585409 THSD7BQ9C0I4 1608 aa29.96■■■□□ 2.39
LSM7-203ENST00000585409 PPEF1O14829 653 aaPredicted RBP29.96■■■□□ 2.39
LSM7-203ENST00000585409 C3orf67Q6ZVT6 689 aa29.96■■■□□ 2.39
LSM7-203ENST00000585409 WDR63Q8IWG1 891 aa29.96■■■□□ 2.39
LSM7-203ENST00000585409 LARGE2Q8N3Y3 721 aa29.96■■■□□ 2.39
LSM7-203ENST00000585409 SALL2Q9Y467 1007 aaPredicted RBP29.96■■■□□ 2.39
LSM7-203ENST00000585409 LMOD1P29536 600 aaPredicted RBP29.95■■■□□ 2.39
LSM7-203ENST00000585409 DDX21Q9NR30 783 aaKnown RBP eCLIP29.95■■■□□ 2.39
LSM7-203ENST00000585409 EPS15P42566 896 aa29.94■■■□□ 2.38
LSM7-203ENST00000585409 LRP10Q7Z4F1 713 aa29.94■■■□□ 2.38
LSM7-203ENST00000585409 WDR33Q9C0J8 1336 aaKnown RBP29.94■■■□□ 2.38
LSM7-203ENST00000585409 LBX1P52954 281 aa29.93■■■□□ 2.38
LSM7-203ENST00000585409 LAMB2P55268 1798 aa29.92■■■□□ 2.38
LSM7-203ENST00000585409 PARP10Q53GL7 1025 aa29.92■■■□□ 2.38
LSM7-203ENST00000585409 PPP1R42Q7Z4L9 355 aa29.92■■■□□ 2.38
LSM7-203ENST00000585409 ABT1Q9ULW3 272 aaKnown RBP29.92■■■□□ 2.38
LSM7-203ENST00000585409 ANKRD36CQ5JPF3 1778 aa29.92■■■□□ 2.38
LSM7-203ENST00000585409 PDIA6Q15084 440 aa29.91■■■□□ 2.38
LSM7-203ENST00000585409 ZNF853P0CG23 659 aa29.9■■■□□ 2.38
LSM7-203ENST00000585409 HSPA8P11142 646 aaKnown RBP29.9■■■□□ 2.38
LSM7-203ENST00000585409 MAP2K1Q02750 393 aaPredicted RBP29.9■■■□□ 2.38
LSM7-203ENST00000585409 SLC10A5Q5PT55 438 aa29.9■■■□□ 2.38
LSM7-203ENST00000585409 USP50Q70EL3 339 aaPredicted RBP29.9■■■□□ 2.38
LSM7-203ENST00000585409 NIM1KQ8IY84 436 aa29.9■■■□□ 2.38
LSM7-203ENST00000585409 VPS33BQ9H267 617 aa29.9■■■□□ 2.38
LSM7-203ENST00000585409 TCERG1O14776 1098 aaKnown RBP29.89■■■□□ 2.38
LSM7-203ENST00000585409 NLRP3Q96P20 1036 aa29.89■■■□□ 2.38
LSM7-203ENST00000585409 ATP6V0A2Q9Y487 856 aa29.89■■■□□ 2.38
LSM7-203ENST00000585409 FMR1Q06787 632 aaKnown RBP eCLIP29.88■■■□□ 2.37
LSM7-203ENST00000585409 CHMP4AQ9BY43 222 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms